RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
MKS1-207ENST00000578789 AATFQ9NY61 560 aaKnown RBP eCLIP17.58■□□□□ 0.4
MKS1-207ENST00000578789 GOLIM4O00461 696 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 MAP3K9P80192 1104 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 SPRYD7Q5W111 196 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.57■□□□□ 0.4
MKS1-207ENST00000578789 CERS3Q8IU89 383 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 TEX11Q8IYF3 940 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 MAGEB6Q8N7X4 407 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 GPATCH3Q96I76 525 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 ZNF341Q9BYN7 854 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 PAG1Q9NWQ8 432 aa17.57■□□□□ 0.4
MKS1-207ENST00000578789 SIPA1L1O43166 1804 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 CA12O43570 354 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 ZBTB48P10074 688 aaPredicted RBP17.56■□□□□ 0.4
MKS1-207ENST00000578789 PICALMQ13492 652 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 VGLL4Q14135 290 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 SLC10A4Q96EP9 437 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 EDC3Q96F86 508 aaKnown RBP17.56■□□□□ 0.4
MKS1-207ENST00000578789 WNK4Q96J92 1243 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 CSRNP1Q96S65 589 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 BEGAINQ9BUH8 593 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
MKS1-207ENST00000578789 ZNF112Q9UJU3 913 aa17.56■□□□□ 0.4
MKS1-207ENST00000578789 PCNTO95613 3336 aa17.55■□□□□ 0.4
MKS1-207ENST00000578789 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
MKS1-207ENST00000578789 TTC41PQ6P2S7 1318 aa17.55■□□□□ 0.4
MKS1-207ENST00000578789 SALL3Q9BXA9 1300 aa17.55■□□□□ 0.4
MKS1-207ENST00000578789 DDTLA6NHG4 134 aaPredicted RBP17.55■□□□□ 0.4
MKS1-207ENST00000578789 PDE6AP16499 860 aa17.55■□□□□ 0.4
MKS1-207ENST00000578789 CTCFP49711 727 aaPredicted RBP17.55■□□□□ 0.4
MKS1-207ENST00000578789 MAP3K10Q02779 954 aa17.55■□□□□ 0.4
MKS1-207ENST00000578789 WRNIP1Q96S55 665 aa17.55■□□□□ 0.4
MKS1-207ENST00000578789 HSPA8P11142 646 aaKnown RBP17.54■□□□□ 0.4
MKS1-207ENST00000578789 MIGA2Q7L4E1 593 aa17.54■□□□□ 0.4
MKS1-207ENST00000578789 SMC5Q8IY18 1101 aa17.54■□□□□ 0.4
MKS1-207ENST00000578789 RWDD1Q9H446 243 aaPredicted RBP17.54■□□□□ 0.4
MKS1-207ENST00000578789 SAGE1Q9NXZ1 904 aa17.54■□□□□ 0.4
MKS1-207ENST00000578789 CSADQ9Y600 493 aa17.54■□□□□ 0.4
MKS1-207ENST00000578789 SNCAIPQ9Y6H5 919 aa17.54■□□□□ 0.4
MKS1-207ENST00000578789 DOCK1Q14185 1865 aa17.54■□□□□ 0.4
MKS1-207ENST00000578789 FLT1P17948 1338 aa17.53■□□□□ 0.4
MKS1-207ENST00000578789 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
MKS1-207ENST00000578789 TCRBV5S4A2TA0A5A2 114 aa17.53■□□□□ 0.4
MKS1-207ENST00000578789 GJA5P36382 358 aa17.53■□□□□ 0.4
MKS1-207ENST00000578789 DYNLL1P63167 89 aaKnown RBP17.53■□□□□ 0.4
MKS1-207ENST00000578789 NOL9Q5SY16 702 aaKnown RBP17.53■□□□□ 0.4
MKS1-207ENST00000578789 SLC9C2Q5TAH2 1124 aa17.53■□□□□ 0.4
MKS1-207ENST00000578789 ZSCAN29Q8IWY8 852 aaPredicted RBP17.53■□□□□ 0.4
MKS1-207ENST00000578789 MIGA1Q8NAN2 632 aa17.53■□□□□ 0.4
MKS1-207ENST00000578789 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
MKS1-207ENST00000578789 ELP3Q9H9T3 547 aa17.53■□□□□ 0.4
MKS1-207ENST00000578789 MYH1P12882 1939 aa17.53■□□□□ 0.4
MKS1-207ENST00000578789 ZNF532Q9HCE3 1301 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 MANSC4A6NHS7 340 aaPredicted RBP17.52■□□□□ 0.4
MKS1-207ENST00000578789 SPDYE5A6NIY4 337 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 INPP5BP32019 993 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 ADD2P35612 726 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 TM4SF4P48230 202 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 MKRN3Q13064 507 aaKnown RBP17.52■□□□□ 0.4
MKS1-207ENST00000578789 ANKRD45Q5TZF3 282 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 OTUD7AQ8TE49 926 aaPredicted RBP17.52■□□□□ 0.4
MKS1-207ENST00000578789 TGFBRAP1Q8WUH2 860 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 OPTNQ96CV9 577 aa17.52■□□□□ 0.4
MKS1-207ENST00000578789 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.41e-6■■■■■ 38.5
MKS1-207ENST00000578789 PHF20L1A8MW92 1017 aa17.51■□□□□ 0.39
MKS1-207ENST00000578789 TBC1D12O60347 775 aa17.51■□□□□ 0.39
MKS1-207ENST00000578789 IGHDP01880 384 aa17.51■□□□□ 0.39
MKS1-207ENST00000578789 MX1P20591 662 aa17.51■□□□□ 0.39
MKS1-207ENST00000578789 PI4K2BQ8TCG2 481 aa17.51■□□□□ 0.39
MKS1-207ENST00000578789 ZKSCAN4Q969J2 545 aaPredicted RBP17.51■□□□□ 0.39
MKS1-207ENST00000578789 DHX36Q9H2U1 1008 aaKnown RBP17.51■□□□□ 0.39
MKS1-207ENST00000578789 PRDM10Q9NQV6 1147 aa17.51■□□□□ 0.39
MKS1-207ENST00000578789 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
MKS1-207ENST00000578789 ATAD5Q96QE3 1844 aa17.5■□□□□ 0.39
MKS1-207ENST00000578789 MAGEB6P1A0A0J9YX57 407 aa17.5■□□□□ 0.39
MKS1-207ENST00000578789 ERC2O15083 957 aa17.5■□□□□ 0.39
MKS1-207ENST00000578789 UBE3CQ15386 1083 aa17.5■□□□□ 0.39
MKS1-207ENST00000578789 ERO1BQ86YB8 467 aa17.5■□□□□ 0.39
MKS1-207ENST00000578789 MAPKAPK5Q8IW41 473 aa17.5■□□□□ 0.39
MKS1-207ENST00000578789 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
MKS1-207ENST00000578789 RNF186Q9NXI6 227 aa17.5■□□□□ 0.39
MKS1-207ENST00000578789 TESPA1A2RU30 521 aaPredicted RBP17.49■□□□□ 0.39
MKS1-207ENST00000578789 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
MKS1-207ENST00000578789 LBX1P52954 281 aa17.49■□□□□ 0.39
MKS1-207ENST00000578789 INHBEP58166 350 aa17.49■□□□□ 0.39
MKS1-207ENST00000578789 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
MKS1-207ENST00000578789 IFFO2Q5TF58 517 aa17.49■□□□□ 0.39
MKS1-207ENST00000578789 ZSCAN25Q6NSZ9 544 aa17.49■□□□□ 0.39
MKS1-207ENST00000578789 KBTBD3Q8NAB2 608 aa17.49■□□□□ 0.39
MKS1-207ENST00000578789 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.49■□□□□ 0.39
MKS1-207ENST00000578789 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
MKS1-207ENST00000578789 SLURP2P0DP57 97 aa17.48■□□□□ 0.39
MKS1-207ENST00000578789 USP5P45974 858 aa17.48■□□□□ 0.39
MKS1-207ENST00000578789 PPIL2Q13356 520 aa17.48■□□□□ 0.39
MKS1-207ENST00000578789 METTL16Q86W50 562 aaKnown RBP17.48■□□□□ 0.39
MKS1-207ENST00000578789 SCYL3Q8IZE3 742 aa17.48■□□□□ 0.39
MKS1-207ENST00000578789 OTUD5Q96G74 571 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms