RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ENTPD3O75355 529 aa14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 CIAO1O76071 339 aa14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 FARP2O94887 1054 aaPredicted RBP14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 GADL1Q6ZQY3 521 aa14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 ZSCAN29Q8IWY8 852 aaPredicted RBP14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 SLF2Q8IX21 1173 aa14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 SMCR8Q8TEV9 937 aaPredicted RBP14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 SSH1Q8WYL5 1049 aa14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 IDI2Q9BXS1 227 aa14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 SIL1Q9H173 461 aa14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 SLC45A1Q9Y2W3 748 aa14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 LRRFIP2Q9Y608 721 aaKnown RBP14.5□□□□□ -0.09
CTDNEP1-212ENST00000576613 PTPRFP10586 1907 aa14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 PHF20L1A8MW92 1017 aa14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 TNPO2O14787 897 aaKnown RBP14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 ADCY3O60266 1144 aa14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 UBTFL1P0CB47 393 aaPredicted RBP14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 PTPRAP18433 802 aa14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 RGS3P49796 1198 aa14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 DZIP1Q86YF9 867 aaKnown RBP14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 ZFPM1Q8IX07 1006 aa14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 UNC93B1Q9H1C4 597 aa14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 GABRQQ9UN88 632 aa14.49□□□□□ -0.09
CTDNEP1-212ENST00000576613 E9PSI1 815 aa14.48□□□□□ -0.09
CTDNEP1-212ENST00000576613 SGPL1O95470 568 aa14.48□□□□□ -0.09
CTDNEP1-212ENST00000576613 IL15P40933 162 aaPredicted RBP14.48□□□□□ -0.09
CTDNEP1-212ENST00000576613 FLT3LGP49771 235 aa14.48□□□□□ -0.09
CTDNEP1-212ENST00000576613 PXYLP1Q8TE99 480 aa14.48□□□□□ -0.09
CTDNEP1-212ENST00000576613 HDAC5Q9UQL6 1122 aa14.48□□□□□ -0.09
CTDNEP1-212ENST00000576613 AFG3L2Q9Y4W6 797 aa14.48□□□□□ -0.09
CTDNEP1-212ENST00000576613 RFX7Q2KHR2 1363 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 GAKO14976 1311 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 ZBTB22O15209 634 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 EVI5O60447 810 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 CTNND1O60716 968 aaKnown RBP14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 INHAP05111 366 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 PHKA1P46020 1223 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 IRF5Q13568 498 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 ALDH1L2Q3SY69 923 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 PHIPQ8WWQ0 1821 aa14.47□□□□□ -0.09
CTDNEP1-212ENST00000576613 PDS5AQ29RF7 1337 aaKnown RBP14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 A0A1W2PPC1 479 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 TRIM75PA6NK02 468 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 ZBTB7BO15156 539 aaPredicted RBP14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 TFRCP02786 760 aaKnown RBP14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 ELNP15502 786 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 MAP3K10Q02779 954 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 SPTY2D1Q68D10 685 aaPredicted RBP14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 CCDC102BQ68D86 513 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 COA7Q96BR5 231 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 PRO3102Q9H379 93 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 ABCF2Q9UG63 623 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 PNMA3Q9UL41 463 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 AGTPBP1Q9UPW5 1226 aa14.46□□□□□ -0.09
CTDNEP1-212ENST00000576613 PICALMQ13492 652 aa14.45□□□□□ -0.1
CTDNEP1-212ENST00000576613 SH3BP5LQ7L8J4 393 aa14.45□□□□□ -0.1
CTDNEP1-212ENST00000576613 FAM163AQ96GL9 167 aaPredicted RBP14.45□□□□□ -0.1
CTDNEP1-212ENST00000576613 DEFB118Q96PH6 123 aa14.45□□□□□ -0.1
CTDNEP1-212ENST00000576613 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
CTDNEP1-212ENST00000576613 MROH7-TTC4A0A0A0MT08 1334 aa14.44□□□□□ -0.1
CTDNEP1-212ENST00000576613 DDTLA6NHG4 134 aaPredicted RBP14.44□□□□□ -0.1
CTDNEP1-212ENST00000576613 BTDP43251 543 aa14.44□□□□□ -0.1
CTDNEP1-212ENST00000576613 RASGRF1Q13972 1273 aa14.44□□□□□ -0.1
CTDNEP1-212ENST00000576613 PAK6Q9NQU5 681 aaPredicted RBP14.44□□□□□ -0.1
CTDNEP1-212ENST00000576613 LOC285556D6RIA3 1793 aa14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 ADORA1P30542 326 aa14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 PABPC4Q13310 644 aaKnown RBP eCLIP14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 FAM110CQ1W6H9 321 aa14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 ANKRD13CQ8N6S4 541 aa14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 PROCA1Q8NCQ7 364 aaPredicted RBP14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 TBC1D2Q9BYX2 928 aa14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 COPRSQ9NQ92 184 aa14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 DDX4Q9NQI0 724 aaKnown RBP14.43□□□□□ -0.1
CTDNEP1-212ENST00000576613 TBC1D12O60347 775 aa14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 GCLCP48506 637 aaPredicted RBP14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 SLFN5Q08AF3 891 aa14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 MVPQ14764 893 aaKnown RBP14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 ERICH6Q7L0X2 663 aa14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 NECAB2Q7Z6G3 386 aa14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 CRISPLD2Q9H0B8 497 aa14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 OSBPL5Q9H0X9 879 aaPredicted RBP14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 PA2G4Q9UQ80 394 aaKnown RBP14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 AKAP2Q9Y2D5 859 aa14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 ATAD5Q96QE3 1844 aa14.42□□□□□ -0.1
CTDNEP1-212ENST00000576613 GPR75-ASB3A0A0A6YYF3 556 aa14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 MAP4K4O95819 1239 aaPredicted RBP14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 TIMM10P62072 90 aa14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 GSTO1P78417 241 aa14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 MECOMQ03112 1051 aa14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 TREML2Q5T2D2 321 aa14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 ANKLE1Q8NAG6 615 aa14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 ZNF280CQ8ND82 737 aa14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 PAWRQ96IZ0 340 aaKnown RBP14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 API5Q9BZZ5 524 aaKnown RBP14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 COL2A1P02458 1487 aaPredicted RBP14.41□□□□□ -0.1
CTDNEP1-212ENST00000576613 A0A1B0GUL7 405 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms