RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 RHBDL3P58872 404 aa17.5■□□□□ 0.39
ABR-223ENST00000573895 TCP10Q12799 353 aa17.5■□□□□ 0.39
ABR-223ENST00000573895 NOM1Q5C9Z4 860 aaKnown RBP17.5■□□□□ 0.39
ABR-223ENST00000573895 ZNF341Q9BYN7 854 aa17.5■□□□□ 0.39
ABR-223ENST00000573895 SNRKQ9NRH2 765 aa17.5■□□□□ 0.39
ABR-223ENST00000573895 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
ABR-223ENST00000573895 ZAP70P43403 619 aa17.49■□□□□ 0.39
ABR-223ENST00000573895 MKRN3Q13064 507 aaKnown RBP17.49■□□□□ 0.39
ABR-223ENST00000573895 VGLL4Q14135 290 aa17.49■□□□□ 0.39
ABR-223ENST00000573895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.49■□□□□ 0.39
ABR-223ENST00000573895 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
ABR-223ENST00000573895 IL1RAPL2Q9NP60 686 aa17.49■□□□□ 0.39
ABR-223ENST00000573895 ZNF112Q9UJU3 913 aa17.49■□□□□ 0.39
ABR-223ENST00000573895 TESPA1A2RU30 521 aaPredicted RBP17.48■□□□□ 0.39
ABR-223ENST00000573895 BAG3O95817 575 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 PLCG2P16885 1265 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 GJA5P36382 358 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 PPP4CP60510 307 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 MAP3K10Q02779 954 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 NUCB1Q02818 461 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 ANKRD45Q5TZF3 282 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 NAA16Q6N069 864 aaPredicted RBP17.48■□□□□ 0.39
ABR-223ENST00000573895 OPTNQ96CV9 577 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 WRNIP1Q96S55 665 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 NOL10Q9BSC4 688 aaKnown RBP17.48■□□□□ 0.39
ABR-223ENST00000573895 FOCADQ5VW36 1801 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 COL2A1P02458 1487 aaPredicted RBP17.48■□□□□ 0.39
ABR-223ENST00000573895 CDK5RAP2Q96SN8 1893 aa17.48■□□□□ 0.39
ABR-223ENST00000573895 SPDYE5A6NIY4 337 aa17.47■□□□□ 0.39
ABR-223ENST00000573895 ERO1BQ86YB8 467 aa17.47■□□□□ 0.39
ABR-223ENST00000573895 IFNL1Q8IU54 200 aa17.47■□□□□ 0.39
ABR-223ENST00000573895 ZFPM1Q8IX07 1006 aa17.47■□□□□ 0.39
ABR-223ENST00000573895 ATRNL1Q5VV63 1379 aa17.47■□□□□ 0.39
ABR-223ENST00000573895 IFIT2P09913 472 aaKnown RBP17.46■□□□□ 0.39
ABR-223ENST00000573895 TTF1Q15361 905 aaPredicted RBP17.46■□□□□ 0.39
ABR-223ENST00000573895 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
ABR-223ENST00000573895 MIGA2Q7L4E1 593 aa17.46■□□□□ 0.39
ABR-223ENST00000573895 CHD1LQ86WJ1 897 aa17.46■□□□□ 0.39
ABR-223ENST00000573895 CERS3Q8IU89 383 aa17.46■□□□□ 0.39
ABR-223ENST00000573895 LRRCC1Q9C099 1032 aa17.46■□□□□ 0.39
ABR-223ENST00000573895 DDX4Q9NQI0 724 aaKnown RBP17.46■□□□□ 0.39
ABR-223ENST00000573895 PIH1D3Q9NQM4 214 aaKnown RBP17.46■□□□□ 0.39
ABR-223ENST00000573895 SNCAIPQ9Y6H5 919 aa17.46■□□□□ 0.39
ABR-223ENST00000573895 APBB1O00213 710 aa17.45■□□□□ 0.38
ABR-223ENST00000573895 GTF2A2P52657 109 aa17.45■□□□□ 0.38
ABR-223ENST00000573895 PPATQ06203 517 aa17.45■□□□□ 0.38
ABR-223ENST00000573895 NOL9Q5SY16 702 aaKnown RBP17.45■□□□□ 0.38
ABR-223ENST00000573895 SH3BP5LQ7L8J4 393 aa17.45■□□□□ 0.38
ABR-223ENST00000573895 ZKSCAN4Q969J2 545 aaPredicted RBP17.45■□□□□ 0.38
ABR-223ENST00000573895 MS4A4AQ96JQ5 239 aa17.45■□□□□ 0.38
ABR-223ENST00000573895 TBC1D12O60347 775 aa17.44■□□□□ 0.38
ABR-223ENST00000573895 MAP3K12Q12852 859 aa17.44■□□□□ 0.38
ABR-223ENST00000573895 PPIL2Q13356 520 aa17.44■□□□□ 0.38
ABR-223ENST00000573895 PICALMQ13492 652 aa17.44■□□□□ 0.38
ABR-223ENST00000573895 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
ABR-223ENST00000573895 DDTLA6NHG4 134 aaPredicted RBP17.43■□□□□ 0.38
ABR-223ENST00000573895 PHF20L1A8MW92 1017 aa17.43■□□□□ 0.38
ABR-223ENST00000573895 IGF2BP3O00425 579 aaKnown RBP eCLIP17.43■□□□□ 0.38
ABR-223ENST00000573895 INPP5BP32019 993 aa17.43■□□□□ 0.38
ABR-223ENST00000573895 TEX11Q8IYF3 940 aa17.43■□□□□ 0.38
ABR-223ENST00000573895 OTUD5Q96G74 571 aa17.43■□□□□ 0.38
ABR-223ENST00000573895 OSBPL5Q9H0X9 879 aaPredicted RBP17.43■□□□□ 0.38
ABR-223ENST00000573895 AATFQ9NY61 560 aaKnown RBP eCLIP17.43■□□□□ 0.38
ABR-223ENST00000573895 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
ABR-223ENST00000573895 IDH1O75874 414 aaKnown RBP17.42■□□□□ 0.38
ABR-223ENST00000573895 TBC1D8O95759 1140 aa17.42■□□□□ 0.38
ABR-223ENST00000573895 ATP5JP18859 108 aa17.42■□□□□ 0.38
ABR-223ENST00000573895 ADGRA1Q86SQ6 560 aa17.42■□□□□ 0.38
ABR-223ENST00000573895 SH3RF3Q8TEJ3 882 aaPredicted RBP17.42■□□□□ 0.38
ABR-223ENST00000573895 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
ABR-223ENST00000573895 DHX36Q9H2U1 1008 aaKnown RBP17.42■□□□□ 0.38
ABR-223ENST00000573895 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
ABR-223ENST00000573895 ZCCHC17Q9NP64 241 aaKnown RBP17.42■□□□□ 0.38
ABR-223ENST00000573895 GPR25O00155 361 aa17.41■□□□□ 0.38
ABR-223ENST00000573895 IRF6O14896 467 aa17.41■□□□□ 0.38
ABR-223ENST00000573895 CETPP11597 493 aa17.41■□□□□ 0.38
ABR-223ENST00000573895 CYP7A1P22680 504 aa17.41■□□□□ 0.38
ABR-223ENST00000573895 SNAPC2Q13487 334 aa17.41■□□□□ 0.38
ABR-223ENST00000573895 PTPN18Q99952 460 aa17.41■□□□□ 0.38
ABR-223ENST00000573895 DOCK1Q14185 1865 aa17.41■□□□□ 0.38
ABR-223ENST00000573895 CCL15-CCL14A0A0B4J2E2 113 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 CTNND1O60716 968 aaKnown RBP17.4■□□□□ 0.38
ABR-223ENST00000573895 CCL15Q16663 113 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 ZNF296Q8WUU4 475 aaPredicted RBP17.4■□□□□ 0.38
ABR-223ENST00000573895 BRI3BPQ8WY22 251 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 LNPKQ9C0E8 428 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 PI4KBQ9UBF8 816 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 HERC5Q9UII4 1024 aaKnown RBP17.4■□□□□ 0.38
ABR-223ENST00000573895 KCNH4Q9UQ05 1017 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 NDUFB9Q9Y6M9 179 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 MYH1P12882 1939 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 MYH7P12883 1935 aa17.4■□□□□ 0.38
ABR-223ENST00000573895 MCOLN1Q9GZU1 580 aa17.39■□□□□ 0.37
ABR-223ENST00000573895 PHIPQ8WWQ0 1821 aa17.39■□□□□ 0.37
ABR-223ENST00000573895 SIPA1L1O43166 1804 aa17.38■□□□□ 0.37
ABR-223ENST00000573895 ATAD5Q96QE3 1844 aa17.38■□□□□ 0.37
ABR-223ENST00000573895 CXCL11O14625 94 aa17.38■□□□□ 0.37
ABR-223ENST00000573895 FKTNO75072 461 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms