RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 GPR108Q9NPR9 543 aa16.82■□□□□ 0.28
PKM-220ENST00000568459 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
PKM-220ENST00000568459 TAF6LQ9Y6J9 622 aa16.82■□□□□ 0.28
PKM-220ENST00000568459 ZNF609O15014 1411 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 FZD9O00144 591 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 JAK2O60674 1132 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 CYP21A2P08686 494 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 APLP1P51693 650 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 SCRN1Q12765 414 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 SNW1Q13573 536 aaKnown RBP16.81■□□□□ 0.28
PKM-220ENST00000568459 COL9A3Q14050 684 aaPredicted RBP16.81■□□□□ 0.28
PKM-220ENST00000568459 DPP8Q6V1X1 898 aaPredicted RBP16.81■□□□□ 0.28
PKM-220ENST00000568459 CCDC73Q6ZRK6 1079 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 ZNF274Q96GC6 653 aaPredicted RBP16.81■□□□□ 0.28
PKM-220ENST00000568459 OSBPL5Q9H0X9 879 aaPredicted RBP16.81■□□□□ 0.28
PKM-220ENST00000568459 VPS33BQ9H267 617 aa16.81■□□□□ 0.28
PKM-220ENST00000568459 DBNLQ9UJU6 430 aaKnown RBP16.81■□□□□ 0.28
PKM-220ENST00000568459 DDX41Q9UJV9 622 aaKnown RBP16.81■□□□□ 0.28
PKM-220ENST00000568459 SCN4AP35499 1836 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 A0A1W2PQ27 194 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 A0A1W2PQ64 194 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 A0A1W2PQD8 194 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 IQCA1LA6NCM1 817 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
PKM-220ENST00000568459 PTPN12Q05209 780 aaKnown RBP16.8■□□□□ 0.28
PKM-220ENST00000568459 KBTBD3Q8NAB2 608 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 MORC2Q9Y6X9 1032 aaPredicted RBP16.8■□□□□ 0.28
PKM-220ENST00000568459 U2AF2P26368 475 aaKnown RBP eCLIP16.8■□□□□ 0.284e-9■■■■□ 20.6
PKM-220ENST00000568459 EVCP57679 992 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
PKM-220ENST00000568459 STK3Q13188 491 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 CCDC144BQ3MJ40 725 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 TAF3Q5VWG9 929 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 SLC51AQ86UW1 340 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 CREBRFQ8IUR6 639 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
PKM-220ENST00000568459 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 CEP57L1Q8IYX8 460 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 TCEANC2Q96MN5 208 aa16.8■□□□□ 0.28
PKM-220ENST00000568459 ZNF541Q9H0D2 1346 aa16.79■□□□□ 0.28
PKM-220ENST00000568459 BECN2A8MW95 431 aa16.79■□□□□ 0.28
PKM-220ENST00000568459 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
PKM-220ENST00000568459 PDE8AO60658 829 aa16.79■□□□□ 0.28
PKM-220ENST00000568459 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
PKM-220ENST00000568459 PTPN14Q15678 1187 aa16.79■□□□□ 0.28
PKM-220ENST00000568459 NIM1KQ8IY84 436 aa16.79■□□□□ 0.28
PKM-220ENST00000568459 ERO1AQ96HE7 468 aa16.79■□□□□ 0.28
PKM-220ENST00000568459 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
PKM-220ENST00000568459 RTFDC1Q9BY42 306 aaPredicted RBP16.79■□□□□ 0.28
PKM-220ENST00000568459 DHX40Q8IX18 779 aaKnown RBP16.78■□□□□ 0.28
PKM-220ENST00000568459 GPC2Q8N158 579 aa16.78■□□□□ 0.28
PKM-220ENST00000568459 LAMA4Q16363 1823 aa16.78■□□□□ 0.28
PKM-220ENST00000568459 RPS8P62241 208 aaKnown RBP16.77■□□□□ 0.28
PKM-220ENST00000568459 CCZ1BP86790 482 aa16.77■□□□□ 0.28
PKM-220ENST00000568459 CCZ1P86791 482 aaPredicted RBP16.77■□□□□ 0.28
PKM-220ENST00000568459 AOC3Q16853 763 aa16.77■□□□□ 0.28
PKM-220ENST00000568459 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
PKM-220ENST00000568459 ADALQ6DHV7 355 aa16.77■□□□□ 0.28
PKM-220ENST00000568459 C11orf57Q6ZUT1 292 aaPredicted RBP16.77■□□□□ 0.28
PKM-220ENST00000568459 ZNF397Q8NF99 534 aaPredicted RBP16.77■□□□□ 0.28
PKM-220ENST00000568459 CELF1Q92879 486 aaKnown RBP16.77■□□□□ 0.28
PKM-220ENST00000568459 ARID3AQ99856 593 aa16.77■□□□□ 0.28
PKM-220ENST00000568459 SIL1Q9H173 461 aa16.77■□□□□ 0.28
PKM-220ENST00000568459 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
PKM-220ENST00000568459 RTEL1Q9NZ71 1219 aa16.77■□□□□ 0.28
PKM-220ENST00000568459 SKILP12757 684 aa16.77■□□□□ 0.27
PKM-220ENST00000568459 FAM53CQ9NYF3 392 aa16.77■□□□□ 0.27
PKM-220ENST00000568459 GJA3Q9Y6H8 435 aa16.77■□□□□ 0.27
PKM-220ENST00000568459 MYH3P11055 1940 aa16.76■□□□□ 0.27
PKM-220ENST00000568459 PTPDC1A2A3K4 754 aa16.76■□□□□ 0.27
PKM-220ENST00000568459 CCDC150Q8NCX0 1101 aa16.76■□□□□ 0.27
PKM-220ENST00000568459 KIF18AQ8NI77 898 aa16.76■□□□□ 0.27
PKM-220ENST00000568459 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.76■□□□□ 0.27
PKM-220ENST00000568459 HACL1Q9UJ83 578 aa16.76■□□□□ 0.27
PKM-220ENST00000568459 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
PKM-220ENST00000568459 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 EPHA10Q5JZY3 1008 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 FMR1NBQ8N0W7 255 aaPredicted RBP16.75■□□□□ 0.27
PKM-220ENST00000568459 CCAR2Q8N163 923 aaKnown RBP16.75■□□□□ 0.27
PKM-220ENST00000568459 MRPS27Q92552 414 aaKnown RBP16.75■□□□□ 0.27
PKM-220ENST00000568459 TAF1DQ9H5J8 278 aaPredicted RBP16.75■□□□□ 0.27
PKM-220ENST00000568459 CCDC69A6NI79 296 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 LRRC37AA6NMS7 1700 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 YEATS4O95619 227 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 COL4A5P29400 1685 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 FGD1P98174 961 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 TFCP2Q12800 502 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 USP28Q96RU2 1077 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 GOLPH3LQ9H4A5 285 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 ZNRF3Q9ULT6 936 aa16.75■□□□□ 0.27
PKM-220ENST00000568459 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
PKM-220ENST00000568459 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
PKM-220ENST00000568459 STOX1Q6ZVD7 989 aa16.74■□□□□ 0.27
PKM-220ENST00000568459 KCNG4Q8TDN1 519 aa16.74■□□□□ 0.27
PKM-220ENST00000568459 CCDC85AQ96PX6 553 aaPredicted RBP16.74■□□□□ 0.27
PKM-220ENST00000568459 L2HGDHQ9H9P8 463 aa16.74■□□□□ 0.27
PKM-220ENST00000568459 H7C1W4 665 aa16.73■□□□□ 0.27
PKM-220ENST00000568459 CCP110O43303 1012 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms