RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 ATP2B3Q16720 1220 aa12.87□□□□□ -0.35
LINC00564-201ENST00000567258 WDR66Q8TBY9 1149 aa12.87□□□□□ -0.35
LINC00564-201ENST00000567258 MCOLN1Q9GZU1 580 aa12.87□□□□□ -0.35
LINC00564-201ENST00000567258 TCP10L2B9ZVM9 353 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 ALDH1A1P00352 501 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 FGFR2P21802 821 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 IL15P40933 162 aaPredicted RBP12.86□□□□□ -0.35
LINC00564-201ENST00000567258 TM4SF4P48230 202 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 RFX5P48382 616 aaPredicted RBP12.86□□□□□ -0.35
LINC00564-201ENST00000567258 INHBEP58166 350 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 LDLRAD1Q5T700 205 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 NBPF12Q5TAG4 269 aaPredicted RBP12.86□□□□□ -0.35
LINC00564-201ENST00000567258 INTS3Q68E01 1043 aaKnown RBP12.86□□□□□ -0.35
LINC00564-201ENST00000567258 ANKRD13AQ8IZ07 590 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 MYH2Q9UKX2 1941 aa12.86□□□□□ -0.35
LINC00564-201ENST00000567258 MANSC4A6NHS7 340 aaPredicted RBP12.85□□□□□ -0.35
LINC00564-201ENST00000567258 ZBTB48P10074 688 aaPredicted RBP12.85□□□□□ -0.35
LINC00564-201ENST00000567258 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
LINC00564-201ENST00000567258 SPRYD7Q5W111 196 aa12.85□□□□□ -0.35
LINC00564-201ENST00000567258 OTUD7BQ6GQQ9 843 aa12.85□□□□□ -0.35
LINC00564-201ENST00000567258 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
LINC00564-201ENST00000567258 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
LINC00564-201ENST00000567258 MEIS3Q99687 375 aa12.85□□□□□ -0.35
LINC00564-201ENST00000567258 MRIQ9BWK5 157 aa12.85□□□□□ -0.35
LINC00564-201ENST00000567258 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
LINC00564-201ENST00000567258 TBC1D8O95759 1140 aa12.84□□□□□ -0.35
LINC00564-201ENST00000567258 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
LINC00564-201ENST00000567258 FZD1Q9UP38 647 aa12.84□□□□□ -0.35
LINC00564-201ENST00000567258 AKAP2Q9Y2D5 859 aa12.84□□□□□ -0.35
LINC00564-201ENST00000567258 CSADQ9Y600 493 aa12.84□□□□□ -0.35
LINC00564-201ENST00000567258 OTOFQ9HC10 1997 aa12.83□□□□□ -0.35
LINC00564-201ENST00000567258 SEMA3EO15041 775 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 USP2O75604 605 aaPredicted RBP12.83□□□□□ -0.36
LINC00564-201ENST00000567258 GNAI2P04899 355 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 LDHBP07195 334 aaKnown RBP12.83□□□□□ -0.36
LINC00564-201ENST00000567258 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 CTU1Q7Z7A3 348 aaKnown RBP12.83□□□□□ -0.36
LINC00564-201ENST00000567258 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
LINC00564-201ENST00000567258 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 WNK4Q96J92 1243 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 ZDHHC15Q96MV8 337 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 COPRSQ9NQ92 184 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 PA2G4Q9UQ80 394 aaKnown RBP12.83□□□□□ -0.36
LINC00564-201ENST00000567258 LAMB1P07942 1786 aa12.83□□□□□ -0.36
LINC00564-201ENST00000567258 BCAR3O75815 825 aa12.82□□□□□ -0.36
LINC00564-201ENST00000567258 TRIM27P14373 513 aa12.82□□□□□ -0.36
LINC00564-201ENST00000567258 GORABQ5T7V8 394 aa12.82□□□□□ -0.36
LINC00564-201ENST00000567258 FTSJ3Q8IY81 847 aaKnown RBP12.82□□□□□ -0.36
LINC00564-201ENST00000567258 CLMNQ96JQ2 1002 aa12.82□□□□□ -0.36
LINC00564-201ENST00000567258 TMEM39BQ9GZU3 492 aa12.82□□□□□ -0.36
LINC00564-201ENST00000567258 WDHD1O75717 1129 aaPredicted RBP12.81□□□□□ -0.36
LINC00564-201ENST00000567258 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 G3BP1Q13283 466 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC00564-201ENST00000567258 GRIK5Q16478 980 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 PKN2Q16513 984 aaKnown RBP12.81□□□□□ -0.36
LINC00564-201ENST00000567258 FKBP1CQ5VVH2 108 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 DCAF15Q66K64 600 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 FAM83AQ86UY5 434 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 SLF2Q8IX21 1173 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 NEUROD6Q96NK8 337 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 LARP6Q9BRS8 491 aaKnown RBP12.81□□□□□ -0.36
LINC00564-201ENST00000567258 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 AOX1Q06278 1338 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 SSC5DA1L4H1 1573 aa12.81□□□□□ -0.36
LINC00564-201ENST00000567258 GPR25O00155 361 aa12.8□□□□□ -0.36
LINC00564-201ENST00000567258 FKTNO75072 461 aa12.8□□□□□ -0.36
LINC00564-201ENST00000567258 CACNB3P54284 484 aa12.8□□□□□ -0.36
LINC00564-201ENST00000567258 MVPQ14764 893 aaKnown RBP12.8□□□□□ -0.36
LINC00564-201ENST00000567258 SPTY2D1Q68D10 685 aaPredicted RBP12.8□□□□□ -0.36
LINC00564-201ENST00000567258 DZIP1Q86YF9 867 aaKnown RBP12.8□□□□□ -0.36
LINC00564-201ENST00000567258 ZNF296Q8WUU4 475 aaPredicted RBP12.8□□□□□ -0.36
LINC00564-201ENST00000567258 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 PHKA1P46020 1223 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 TIMM10P62072 90 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
LINC00564-201ENST00000567258 MTX1Q13505 466 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 NOM1Q5C9Z4 860 aaKnown RBP12.79□□□□□ -0.36
LINC00564-201ENST00000567258 CCDC102BQ68D86 513 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 DDX27Q96GQ7 796 aaKnown RBP12.79□□□□□ -0.36
LINC00564-201ENST00000567258 TEPSINQ96N21 525 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 ABCF2Q9UG63 623 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 SALL1Q9NSC2 1324 aa12.79□□□□□ -0.36
LINC00564-201ENST00000567258 PPP1R3GB7ZBB8 358 aa12.78□□□□□ -0.36
LINC00564-201ENST00000567258 PRDX5P30044 214 aa12.78□□□□□ -0.36
LINC00564-201ENST00000567258 GTF2A2P52657 109 aa12.78□□□□□ -0.36
LINC00564-201ENST00000567258 MLLT1Q03111 559 aaPredicted RBP12.78□□□□□ -0.36
LINC00564-201ENST00000567258 TFCP2Q12800 502 aa12.78□□□□□ -0.36
LINC00564-201ENST00000567258 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
LINC00564-201ENST00000567258 APOBEC3HQ6NTF7 200 aaKnown RBP12.78□□□□□ -0.36
LINC00564-201ENST00000567258 ANKK1Q8NFD2 765 aa12.78□□□□□ -0.36
LINC00564-201ENST00000567258 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
LINC00564-201ENST00000567258 CFHR5Q9BXR6 569 aa12.78□□□□□ -0.36
LINC00564-201ENST00000567258 DOCK2Q92608 1830 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 ADORA1P30542 326 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 TCP10Q12799 353 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 VGLL4Q14135 290 aa12.77□□□□□ -0.37
LINC00564-201ENST00000567258 DIXDC1Q155Q3 683 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms