RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 MAP3K10Q02779 954 aa23.31■■□□□ 1.32
ABCA3-204ENST00000566200 AKAP2Q9Y2D5 859 aa23.31■■□□□ 1.32
ABCA3-204ENST00000566200 MROH7-TTC4A0A0A0MT08 1334 aa23.31■■□□□ 1.32
ABCA3-204ENST00000566200 PNMA6EA0A0J9YXQ4 647 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 BTDP43251 543 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 RHBDL3P58872 404 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 MECOMQ03112 1051 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 MVPQ14764 893 aaKnown RBP23.3■■□□□ 1.32
ABCA3-204ENST00000566200 KIF22Q14807 665 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 PI16Q6UXB8 463 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 NBPF11Q86T75 865 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 SCYL3Q8IZE3 742 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 TRIM47Q96LD4 638 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 TMEM106CQ9BVX2 250 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 HMG20BQ9P0W2 317 aa23.3■■□□□ 1.32
ABCA3-204ENST00000566200 CXCL11O14625 94 aa23.29■■□□□ 1.32
ABCA3-204ENST00000566200 GNRH1P01148 92 aa23.29■■□□□ 1.32
ABCA3-204ENST00000566200 ATF7IPQ6VMQ6 1270 aa23.29■■□□□ 1.32
ABCA3-204ENST00000566200 MGAMO43451 1857 aa23.28■■□□□ 1.32
ABCA3-204ENST00000566200 GPR75-ASB3A0A0A6YYF3 556 aa23.28■■□□□ 1.32
ABCA3-204ENST00000566200 MYCP01106 439 aaPredicted RBP23.28■■□□□ 1.32
ABCA3-204ENST00000566200 SPTY2D1Q68D10 685 aaPredicted RBP23.28■■□□□ 1.32
ABCA3-204ENST00000566200 ZSCAN29Q8IWY8 852 aaPredicted RBP23.28■■□□□ 1.32
ABCA3-204ENST00000566200 NEUROD6Q96NK8 337 aa23.28■■□□□ 1.32
ABCA3-204ENST00000566200 ZHX2Q9Y6X8 837 aa23.28■■□□□ 1.32
ABCA3-204ENST00000566200 GNAI2P04899 355 aa23.27■■□□□ 1.32
ABCA3-204ENST00000566200 PTPRAP18433 802 aa23.27■■□□□ 1.32
ABCA3-204ENST00000566200 PSMC4P43686 418 aa23.27■■□□□ 1.32
ABCA3-204ENST00000566200 PICALMQ13492 652 aa23.27■■□□□ 1.32
ABCA3-204ENST00000566200 TBC1D9Q6ZT07 1266 aa23.27■■□□□ 1.32
ABCA3-204ENST00000566200 SLF2Q8IX21 1173 aa23.27■■□□□ 1.32
ABCA3-204ENST00000566200 FRAT1Q92837 279 aaPredicted RBP23.27■■□□□ 1.32
ABCA3-204ENST00000566200 CLUAP1Q96AJ1 413 aa23.27■■□□□ 1.32
ABCA3-204ENST00000566200 AFG3L2Q9Y4W6 797 aa23.27■■□□□ 1.32
ABCA3-204ENST00000566200 A0A0G2JLL6 359 aaPredicted RBP23.26■■□□□ 1.31
ABCA3-204ENST00000566200 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
ABCA3-204ENST00000566200 CYP2C8P10632 490 aa23.26■■□□□ 1.31
ABCA3-204ENST00000566200 BCRP11274 1271 aa23.26■■□□□ 1.31
ABCA3-204ENST00000566200 OSBPP22059 807 aa23.26■■□□□ 1.31
ABCA3-204ENST00000566200 PRMT2P55345 433 aa23.26■■□□□ 1.31
ABCA3-204ENST00000566200 ERICH6Q7L0X2 663 aa23.26■■□□□ 1.31
ABCA3-204ENST00000566200 PRRT2Q7Z6L0 340 aaPredicted RBP23.26■■□□□ 1.31
ABCA3-204ENST00000566200 SPATA5Q8NB90 893 aa23.26■■□□□ 1.31
ABCA3-204ENST00000566200 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.26■■□□□ 1.31
ABCA3-204ENST00000566200 SRRDQ9UH36 339 aa23.26■■□□□ 1.31
ABCA3-204ENST00000566200 ARID4AP29374 1257 aaPredicted RBP23.25■■□□□ 1.31
ABCA3-204ENST00000566200 SLC4A8Q2Y0W8 1093 aa23.25■■□□□ 1.31
ABCA3-204ENST00000566200 NSUN4Q96CB9 384 aaKnown RBP23.25■■□□□ 1.31
ABCA3-204ENST00000566200 PICK1Q9NRD5 415 aa23.25■■□□□ 1.31
ABCA3-204ENST00000566200 MCAMP43121 646 aa23.24■■□□□ 1.31
ABCA3-204ENST00000566200 CCDC84Q86UT8 332 aaPredicted RBP23.24■■□□□ 1.31
ABCA3-204ENST00000566200 TMEM57Q8N5G2 664 aa23.24■■□□□ 1.31
ABCA3-204ENST00000566200 PARK7Q99497 189 aaKnown RBP23.24■■□□□ 1.31
ABCA3-204ENST00000566200 FAM196BA6NMK8 535 aa23.23■■□□□ 1.31
ABCA3-204ENST00000566200 NPM3O75607 178 aaKnown RBP23.23■■□□□ 1.31
ABCA3-204ENST00000566200 MTFR1Q15390 333 aa23.23■■□□□ 1.31
ABCA3-204ENST00000566200 ATAD5Q96QE3 1844 aa23.23■■□□□ 1.31
ABCA3-204ENST00000566200 SIPA1L1O43166 1804 aa23.22■■□□□ 1.31
ABCA3-204ENST00000566200 CTNND1O60716 968 aaKnown RBP23.22■■□□□ 1.31
ABCA3-204ENST00000566200 FMNL1O95466 1100 aaPredicted RBP23.22■■□□□ 1.31
ABCA3-204ENST00000566200 COL2A1P02458 1487 aaPredicted RBP23.22■■□□□ 1.31
ABCA3-204ENST00000566200 MAST2Q6P0Q8 1798 aa23.22■■□□□ 1.31
ABCA3-204ENST00000566200 TBC1D12O60347 775 aa23.21■■□□□ 1.31
ABCA3-204ENST00000566200 G3BP1Q13283 466 aaKnown RBP eCLIP23.21■■□□□ 1.31
ABCA3-204ENST00000566200 GORABQ5T7V8 394 aa23.21■■□□□ 1.31
ABCA3-204ENST00000566200 GADL1Q6ZQY3 521 aa23.21■■□□□ 1.31
ABCA3-204ENST00000566200 FASTKD5Q7L8L6 764 aaKnown RBP23.21■■□□□ 1.31
ABCA3-204ENST00000566200 GCC1Q96CN9 775 aa23.21■■□□□ 1.31
ABCA3-204ENST00000566200 SHISA4Q96DD7 197 aa23.21■■□□□ 1.31
ABCA3-204ENST00000566200 PCDH10Q9P2E7 1040 aa23.21■■□□□ 1.31
ABCA3-204ENST00000566200 MYPNQ86TC9 1320 aa23.21■■□□□ 1.31
ABCA3-204ENST00000566200 MYO5AQ9Y4I1 1855 aaKnown RBP23.21■■□□□ 1.31
ABCA3-204ENST00000566200 CDK5RAP2Q96SN8 1893 aa23.2■■□□□ 1.3
ABCA3-204ENST00000566200 LOC285556D6RIA3 1793 aa23.2■■□□□ 1.3
ABCA3-204ENST00000566200 PRKCZQ05513 592 aa23.2■■□□□ 1.3
ABCA3-204ENST00000566200 POLA2Q14181 598 aa23.2■■□□□ 1.3
ABCA3-204ENST00000566200 SLC45A1Q9Y2W3 748 aa23.2■■□□□ 1.3
ABCA3-204ENST00000566200 TRIM75PA6NK02 468 aa23.19■■□□□ 1.3
ABCA3-204ENST00000566200 LDHCP07864 332 aa23.19■■□□□ 1.3
ABCA3-204ENST00000566200 HOXD10P28358 340 aa23.19■■□□□ 1.3
ABCA3-204ENST00000566200 GRK4P32298 578 aa23.19■■□□□ 1.3
ABCA3-204ENST00000566200 GSTO1P78417 241 aa23.19■■□□□ 1.3
ABCA3-204ENST00000566200 RRP1BQ14684 758 aaKnown RBP23.19■■□□□ 1.3
ABCA3-204ENST00000566200 HABP4Q5JVS0 413 aaKnown RBP23.19■■□□□ 1.3
ABCA3-204ENST00000566200 RAET1EQ8TD07 263 aa23.19■■□□□ 1.3
ABCA3-204ENST00000566200 OSBPL5Q9H0X9 879 aaPredicted RBP23.19■■□□□ 1.3
ABCA3-204ENST00000566200 RAI14Q9P0K7 980 aa23.19■■□□□ 1.3
ABCA3-204ENST00000566200 GABRQQ9UN88 632 aa23.19■■□□□ 1.3
ABCA3-204ENST00000566200 MAP4K4O95819 1239 aaPredicted RBP23.18■■□□□ 1.3
ABCA3-204ENST00000566200 FOCADQ5VW36 1801 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 UQCRFS1P1P0C7P4 283 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 FCGRTP55899 365 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 TNNI3KQ59H18 835 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 SSH3Q8TE77 659 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 DBNDD2Q9BQY9 259 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.17■■□□□ 1.3
ABCA3-204ENST00000566200 GPR108Q9NPR9 543 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 SNRKQ9NRH2 765 aa23.17■■□□□ 1.3
ABCA3-204ENST00000566200 FPGT-TNNI3KV9GXZ4 949 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms