RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 IRF5Q13568 498 aa15.98■□□□□ 0.15
RNF40-208ENST00000565995 FASTKD5Q7L8L6 764 aaKnown RBP15.98■□□□□ 0.15
RNF40-208ENST00000565995 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
RNF40-208ENST00000565995 IDI2Q9BXS1 227 aa15.98■□□□□ 0.15
RNF40-208ENST00000565995 GABRQQ9UN88 632 aa15.98■□□□□ 0.15
RNF40-208ENST00000565995 AFG3L2Q9Y4W6 797 aa15.98■□□□□ 0.15
RNF40-208ENST00000565995 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
RNF40-208ENST00000565995 ENTPD3O75355 529 aa15.97■□□□□ 0.15
RNF40-208ENST00000565995 CYP2C8P10632 490 aa15.97■□□□□ 0.15
RNF40-208ENST00000565995 DIXDC1Q155Q3 683 aa15.97■□□□□ 0.15
RNF40-208ENST00000565995 UNC93B1Q9H1C4 597 aa15.97■□□□□ 0.15
RNF40-208ENST00000565995 FOCADQ5VW36 1801 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 SEMA3EO15041 775 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 ADCY3O60266 1144 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 FARP2O94887 1054 aaPredicted RBP15.96■□□□□ 0.15
RNF40-208ENST00000565995 LDHBP07195 334 aaKnown RBP15.96■□□□□ 0.15
RNF40-208ENST00000565995 PTPRAP18433 802 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 PRDX5P30044 214 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 ZFPM1Q8IX07 1006 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 SCYL3Q8IZE3 742 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 USP40Q9NVE5 1235 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 BIN2Q9UBW5 565 aaPredicted RBP15.96■□□□□ 0.15
RNF40-208ENST00000565995 RFX7Q2KHR2 1363 aa15.96■□□□□ 0.15
RNF40-208ENST00000565995 DDX60LQ5H9U9 1706 aaKnown RBP15.95■□□□□ 0.14
RNF40-208ENST00000565995 ECM2O94769 699 aaPredicted RBP15.95■□□□□ 0.14
RNF40-208ENST00000565995 CRISPLD2Q9H0B8 497 aa15.95■□□□□ 0.14
RNF40-208ENST00000565995 PAK6Q9NQU5 681 aaPredicted RBP15.95■□□□□ 0.14
RNF40-208ENST00000565995 ZHX2Q9Y6X8 837 aa15.95■□□□□ 0.14
RNF40-208ENST00000565995 GAKO14976 1311 aa15.94■□□□□ 0.14
RNF40-208ENST00000565995 CTNND1O60716 968 aaKnown RBP15.94■□□□□ 0.14
RNF40-208ENST00000565995 CIAO1O76071 339 aa15.94■□□□□ 0.14
RNF40-208ENST00000565995 FLT3LGP49771 235 aa15.94■□□□□ 0.14
RNF40-208ENST00000565995 FAM163AQ96GL9 167 aaPredicted RBP15.94■□□□□ 0.14
RNF40-208ENST00000565995 GNL3LQ9NVN8 582 aaKnown RBP15.94■□□□□ 0.14
RNF40-208ENST00000565995 DENND2AQ9ULE3 1009 aa15.94■□□□□ 0.14
RNF40-208ENST00000565995 DNAH12Q6ZR08 3092 aa15.93■□□□□ 0.14
RNF40-208ENST00000565995 RGS3P49796 1198 aa15.93■□□□□ 0.14
RNF40-208ENST00000565995 SH3BP5LQ7L8J4 393 aa15.93■□□□□ 0.14
RNF40-208ENST00000565995 PICK1Q9NRD5 415 aa15.93■□□□□ 0.14
RNF40-208ENST00000565995 SIPA1L1O43166 1804 aa15.93■□□□□ 0.14
RNF40-208ENST00000565995 FRMPD3Q5JV73 1810 aa15.93■□□□□ 0.14
RNF40-208ENST00000565995 CUL9Q8IWT3 2517 aa15.93■□□□□ 0.14
RNF40-208ENST00000565995 MYO5AQ9Y4I1 1855 aaKnown RBP15.93■□□□□ 0.14
RNF40-208ENST00000565995 PDS5AQ29RF7 1337 aaKnown RBP15.93■□□□□ 0.14
RNF40-208ENST00000565995 TBC1D12O60347 775 aa15.92■□□□□ 0.14
RNF40-208ENST00000565995 EVI5O60447 810 aa15.92■□□□□ 0.14
RNF40-208ENST00000565995 INHAP05111 366 aa15.92■□□□□ 0.14
RNF40-208ENST00000565995 BMP8BP34820 402 aa15.92■□□□□ 0.14
RNF40-208ENST00000565995 ZGPATQ8N5A5 531 aaKnown RBP15.92■□□□□ 0.14
RNF40-208ENST00000565995 DDTLA6NHG4 134 aaPredicted RBP15.91■□□□□ 0.14
RNF40-208ENST00000565995 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
RNF40-208ENST00000565995 TFRCP02786 760 aaKnown RBP15.91■□□□□ 0.14
RNF40-208ENST00000565995 ELNP15502 786 aa15.91■□□□□ 0.14
RNF40-208ENST00000565995 ATP2B3Q16720 1220 aa15.91■□□□□ 0.14
RNF40-208ENST00000565995 GPR153Q6NV75 609 aa15.91■□□□□ 0.14
RNF40-208ENST00000565995 ANKLE1Q8NAG6 615 aa15.91■□□□□ 0.14
RNF40-208ENST00000565995 CEP126Q9P2H0 1117 aa15.91■□□□□ 0.14
RNF40-208ENST00000565995 AGTPBP1Q9UPW5 1226 aa15.91■□□□□ 0.14
RNF40-208ENST00000565995 SOX1O00570 391 aaPredicted RBP15.9■□□□□ 0.14
RNF40-208ENST00000565995 TNPO2O14787 897 aaKnown RBP15.9■□□□□ 0.14
RNF40-208ENST00000565995 GADL1Q6ZQY3 521 aa15.9■□□□□ 0.14
RNF40-208ENST00000565995 PROCA1Q8NCQ7 364 aaPredicted RBP15.9■□□□□ 0.14
RNF40-208ENST00000565995 SSH1Q8WYL5 1049 aa15.9■□□□□ 0.14
RNF40-208ENST00000565995 DEFB118Q96PH6 123 aa15.9■□□□□ 0.14
RNF40-208ENST00000565995 LRRFIP2Q9Y608 721 aaKnown RBP15.9■□□□□ 0.14
RNF40-208ENST00000565995 COL2A1P02458 1487 aaPredicted RBP15.9■□□□□ 0.14
RNF40-208ENST00000565995 UNC80Q8N2C7 3258 aa15.89■□□□□ 0.13
RNF40-208ENST00000565995 LAMA2P24043 3122 aaKnown RBP15.89■□□□□ 0.13
RNF40-208ENST00000565995 PHKA1P46020 1223 aa15.89■□□□□ 0.13
RNF40-208ENST00000565995 FAM110CQ1W6H9 321 aa15.89■□□□□ 0.13
RNF40-208ENST00000565995 SLF2Q8IX21 1173 aa15.89■□□□□ 0.13
RNF40-208ENST00000565995 COA7Q96BR5 231 aa15.89■□□□□ 0.13
RNF40-208ENST00000565995 GDF15Q99988 308 aa15.89■□□□□ 0.13
RNF40-208ENST00000565995 DLL1O00548 723 aa15.88■□□□□ 0.13
RNF40-208ENST00000565995 ANP32CO43423 234 aa15.88■□□□□ 0.13
RNF40-208ENST00000565995 MAP4K4O95819 1239 aaPredicted RBP15.88■□□□□ 0.13
RNF40-208ENST00000565995 IL15P40933 162 aaPredicted RBP15.88■□□□□ 0.13
RNF40-208ENST00000565995 ALDH1L2Q3SY69 923 aa15.88■□□□□ 0.13
RNF40-208ENST00000565995 DIEXFQ68CQ4 756 aaKnown RBP15.88■□□□□ 0.13
RNF40-208ENST00000565995 CCDC102BQ68D86 513 aa15.88■□□□□ 0.13
RNF40-208ENST00000565995 SLC17A8Q8NDX2 589 aa15.88■□□□□ 0.13
RNF40-208ENST00000565995 SMCR8Q8TEV9 937 aaPredicted RBP15.88■□□□□ 0.13
RNF40-208ENST00000565995 PAWRQ96IZ0 340 aaKnown RBP15.88■□□□□ 0.13
RNF40-208ENST00000565995 TBC1D2Q9BYX2 928 aa15.88■□□□□ 0.13
RNF40-208ENST00000565995 COPRSQ9NQ92 184 aa15.88■□□□□ 0.13
RNF40-208ENST00000565995 DDX4Q9NQI0 724 aaKnown RBP15.88■□□□□ 0.13
RNF40-208ENST00000565995 GJD2Q9UKL4 321 aa15.88■□□□□ 0.13
RNF40-208ENST00000565995 GPR75-ASB3A0A0A6YYF3 556 aa15.87■□□□□ 0.13
RNF40-208ENST00000565995 GCLCP48506 637 aaPredicted RBP15.87■□□□□ 0.13
RNF40-208ENST00000565995 SPTY2D1Q68D10 685 aaPredicted RBP15.87■□□□□ 0.13
RNF40-208ENST00000565995 NECAB2Q7Z6G3 386 aa15.87■□□□□ 0.13
RNF40-208ENST00000565995 ANKRD13CQ8N6S4 541 aa15.87■□□□□ 0.13
RNF40-208ENST00000565995 OSBPL5Q9H0X9 879 aaPredicted RBP15.87■□□□□ 0.13
RNF40-208ENST00000565995 STAP2Q9UGK3 403 aa15.87■□□□□ 0.13
RNF40-208ENST00000565995 PNMA3Q9UL41 463 aa15.87■□□□□ 0.13
RNF40-208ENST00000565995 MYH1P12882 1939 aa15.86■□□□□ 0.13
RNF40-208ENST00000565995 SLURP2P0DP57 97 aa15.86■□□□□ 0.13
RNF40-208ENST00000565995 RHBDL3P58872 404 aa15.86■□□□□ 0.13
RNF40-208ENST00000565995 TREML2Q5T2D2 321 aa15.86■□□□□ 0.13
RNF40-208ENST00000565995 ZSCAN29Q8IWY8 852 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms