RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PPP1R12BO60237 982 aaPredicted RBP10.38□□□□□ -0.75
UBR1-204ENST00000563239 SLC10A3P09131 477 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 MX1P20591 662 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 ECE1P42892 770 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 ZNF157P51786 506 aaPredicted RBP10.38□□□□□ -0.75
UBR1-204ENST00000563239 TTLL12Q14166 644 aaPredicted RBP10.38□□□□□ -0.75
UBR1-204ENST00000563239 SLC9C2Q5TAH2 1124 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 B4GALNT3Q6L9W6 998 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 TMED8Q6PL24 325 aaPredicted RBP10.38□□□□□ -0.75
UBR1-204ENST00000563239 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.38□□□□□ -0.75
UBR1-204ENST00000563239 ARMC9Q7Z3E5 817 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 MIGA1Q8NAN2 632 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 CLMNQ96JQ2 1002 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 RIOK1Q9BRS2 568 aaKnown RBP10.38□□□□□ -0.75
UBR1-204ENST00000563239 LNPKQ9C0E8 428 aa10.38□□□□□ -0.75
UBR1-204ENST00000563239 ZNF532Q9HCE3 1301 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 BAG3O95817 575 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 ADD2P35612 726 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 MAP2K2P36507 400 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 PDE1AP54750 535 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 MAP3K10Q02779 954 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 GRM1Q13255 1194 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 PICALMQ13492 652 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 PAXIP1Q6ZW49 1069 aaPredicted RBP10.37□□□□□ -0.75
UBR1-204ENST00000563239 MIGA2Q7L4E1 593 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 CHD1LQ86WJ1 897 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 TEX11Q8IYF3 940 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.37□□□□□ -0.75
UBR1-204ENST00000563239 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 GPATCH3Q96I76 525 aa10.37□□□□□ -0.75
UBR1-204ENST00000563239 COL2A1P02458 1487 aaPredicted RBP10.36□□□□□ -0.75
UBR1-204ENST00000563239 CDK5RAP2Q96SN8 1893 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 OTOFQ9HC10 1997 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 UNCXA6NJT0 531 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 PHF20L1A8MW92 1017 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 GLRX3O76003 335 aaKnown RBP10.36□□□□□ -0.75
UBR1-204ENST00000563239 ATXN8OSP0DMR3 200 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 GJA5P36382 358 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 IREB2P48200 963 aaKnown RBP10.36□□□□□ -0.75
UBR1-204ENST00000563239 KBTBD3Q8NAB2 608 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 TGFBRAP1Q8WUH2 860 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 OSBPL5Q9H0X9 879 aaPredicted RBP10.36□□□□□ -0.75
UBR1-204ENST00000563239 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 ZNF112Q9UJU3 913 aa10.36□□□□□ -0.75
UBR1-204ENST00000563239 FLT1P17948 1338 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 FOCADQ5VW36 1801 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 MAGEB6P1A0A0J9YX57 407 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 PLCG2P16885 1265 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 PDE4AP27815 886 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 MAP3K9P80192 1104 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 KIF23Q02241 960 aaPredicted RBP10.35□□□□□ -0.75
UBR1-204ENST00000563239 NOGQ13253 232 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 VGLL4Q14135 290 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 UBE3CQ15386 1083 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 SPRYD7Q5W111 196 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 MAPKAPK5Q8IW41 473 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 ANKRD13AQ8IZ07 590 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 LCORLQ8N3X6 602 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 CSRNP1Q96S65 589 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 NOL10Q9BSC4 688 aaKnown RBP10.35□□□□□ -0.75
UBR1-204ENST00000563239 SNCAIPQ9Y6H5 919 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
UBR1-204ENST00000563239 ERC2O15083 957 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 TBC1D12O60347 775 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 HSPA1AP0DMV8 641 aaKnown RBP10.34□□□□□ -0.75
UBR1-204ENST00000563239 HSPA1BP0DMV9 641 aaKnown RBP10.34□□□□□ -0.75
UBR1-204ENST00000563239 INPP5BP32019 993 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 RRP1BQ14684 758 aaKnown RBP10.34□□□□□ -0.75
UBR1-204ENST00000563239 DCAF15Q66K64 600 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 ZKSCAN4Q969J2 545 aaPredicted RBP10.34□□□□□ -0.75
UBR1-204ENST00000563239 HOOK2Q96ED9 719 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 SLC10A4Q96EP9 437 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 WNK4Q96J92 1243 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 ZNF341Q9BYN7 854 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■□□□ 14.5
UBR1-204ENST00000563239 PUS7LQ9H0K6 701 aaKnown RBP10.34□□□□□ -0.75
UBR1-204ENST00000563239 OSBPL3Q9H4L5 887 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 ARMT1Q9H993 441 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 ELP3Q9H9T3 547 aa10.34□□□□□ -0.75
UBR1-204ENST00000563239 FAM196BA6NMK8 535 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 RNF113AO15541 343 aaKnown RBP10.33□□□□□ -0.76
UBR1-204ENST00000563239 PRKAB2O43741 272 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 EVX2Q03828 476 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 MKRN3Q13064 507 aaKnown RBP10.33□□□□□ -0.76
UBR1-204ENST00000563239 METTL16Q86W50 562 aaKnown RBP10.33□□□□□ -0.76
UBR1-204ENST00000563239 CERS3Q8IU89 383 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 ZSCAN29Q8IWY8 852 aaPredicted RBP10.33□□□□□ -0.76
UBR1-204ENST00000563239 OSBP2Q969R2 916 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 WRNIP1Q96S55 665 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 DNAJC18Q9H819 358 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
UBR1-204ENST00000563239 SAP30BPQ9UHR5 308 aaKnown RBP10.33□□□□□ -0.76
UBR1-204ENST00000563239 PALD1Q9ULE6 856 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 MYH7P12883 1935 aa10.33□□□□□ -0.76
UBR1-204ENST00000563239 DDX60LQ5H9U9 1706 aaKnown RBP10.33□□□□□ -0.76
UBR1-204ENST00000563239 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
UBR1-204ENST00000563239 FOXN1O15353 648 aa10.32□□□□□ -0.76
UBR1-204ENST00000563239 MBD4O95243 580 aa10.32□□□□□ -0.76
UBR1-204ENST00000563239 TM4SF4P48230 202 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms