RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 RCAN1P53805 252 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 CTR9Q6PD62 1173 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 NOL8Q76FK4 1167 aaKnown RBP13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 TEX11Q8IYF3 940 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 CERS5Q8N5B7 392 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 BRF1Q92994 677 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 ZDHHC15Q96MV8 337 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 LLPHQ9BRT6 129 aaKnown RBP13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 MCM9Q9NXL9 1143 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 MKRN1Q9UHC7 482 aaKnown RBP13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 HDAC9Q9UKV0 1011 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 TPCN1Q9ULQ1 816 aa13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 ANGEL1Q9UNK9 670 aaKnown RBP13.94□□□□□ -0.18
AC087878.1-201ENST00000560709 BRCA1P38398 1863 aaKnown RBP13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 MINDY4BA8MYZ0 360 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 USP17L21D6R901 530 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 RHBDL3P58872 404 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 RAB3GAP1Q15042 981 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 GRIK5Q16478 980 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 ME3Q16798 604 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 SH3RF3Q8TEJ3 882 aaPredicted RBP13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 GTF3C6Q969F1 213 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 ZNRF3Q9ULT6 936 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 KIF3AQ9Y496 699 aa13.93□□□□□ -0.18
AC087878.1-201ENST00000560709 NEDD4P46934 1319 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 SH2B2O14492 632 aaPredicted RBP13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 PFKFB2O60825 505 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 PDCP20941 246 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 CRKP46108 304 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 CTDSPL2Q05D32 466 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 NFKBIBQ15653 356 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 C12orf60Q5U649 245 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 SGMS1Q86VZ5 419 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 IQCA1Q86XH1 822 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 AGBL3Q8NEM8 1001 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 JDP2Q8WYK2 163 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
AC087878.1-201ENST00000560709 FLT1P17948 1338 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 LAMB1P07942 1786 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 B4E1Z4 1266 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 GOLGA6L22H0YM25 854 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 VIL1P09327 827 aaKnown RBP13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 ANTXR2P58335 489 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 HMGN5P82970 282 aaKnown RBP13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 RSBN1LQ6PCB5 846 aaPredicted RBP13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 TTC6Q86TZ1 520 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 CCDC83Q8IWF9 413 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 TGFBRAP1Q8WUH2 860 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 UBAC1Q9BSL1 405 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 TOMM22Q9NS69 142 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 BCS1LQ9Y276 419 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 CHD4Q14839 1912 aa13.91□□□□□ -0.18
AC087878.1-201ENST00000560709 PSME4Q14997 1843 aa13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 KDM4AO75164 1064 aa13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 POLR3DP05423 398 aaPredicted RBP13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 TNIP1Q15025 636 aa13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 PPP2R5BQ15173 497 aa13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 CPLX2Q6PUV4 134 aaKnown RBP13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 SYNE3Q6ZMZ3 975 aa13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
AC087878.1-201ENST00000560709 WDR33Q9C0J8 1336 aaKnown RBP13.9□□□□□ -0.19
AC087878.1-201ENST00000560709 NAV1Q8NEY1 1877 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 NID2Q14112 1375 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 F8W031 263 aaPredicted RBP13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 CDKL5O76039 1030 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 LARGE1O95461 756 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 RPS12P25398 132 aaKnown RBP13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 NBR1Q14596 966 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 WTAPQ15007 396 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 RRP12Q5JTH9 1297 aaKnown RBP13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 APOBEC3HQ6NTF7 200 aaKnown RBP13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 KIAA0825Q8IV33 1275 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 IGDCC4Q8TDY8 1250 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 IDI2Q9BXS1 227 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 LRRC2Q9BYS8 371 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 USP40Q9NVE5 1235 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 ZSWIM5Q9P217 1185 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 FER1L6Q2WGJ9 1857 aa13.89□□□□□ -0.19
AC087878.1-201ENST00000560709 COL2A1P02458 1487 aaPredicted RBP13.88□□□□□ -0.19
AC087878.1-201ENST00000560709 ARFGEF1Q9Y6D6 1849 aa13.88□□□□□ -0.19
AC087878.1-201ENST00000560709 DDX60LQ5H9U9 1706 aaKnown RBP13.88□□□□□ -0.19
AC087878.1-201ENST00000560709 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
AC087878.1-201ENST00000560709 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms