RNA–Protein interactions for RNA: ENST00000559757.1

RNF111-208, Transcript of ring finger protein 111, humanhuman

TSL 4

Gene RNF111, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-208ENST00000559757 ELP3Q9H9T3 547 aa20.66■□□□□ 0.9
RNF111-208ENST00000559757 RNF186Q9NXI6 227 aa20.66■□□□□ 0.9
RNF111-208ENST00000559757 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.66■□□□□ 0.9
RNF111-208ENST00000559757 COL2A1P02458 1487 aaPredicted RBP20.65■□□□□ 0.9
RNF111-208ENST00000559757 PPP4CP60510 307 aa20.65■□□□□ 0.9
RNF111-208ENST00000559757 MIGA2Q7L4E1 593 aa20.65■□□□□ 0.9
RNF111-208ENST00000559757 TEX11Q8IYF3 940 aa20.65■□□□□ 0.9
RNF111-208ENST00000559757 OPTNQ96CV9 577 aa20.65■□□□□ 0.9
RNF111-208ENST00000559757 AATFQ9NY61 560 aaKnown RBP eCLIP20.65■□□□□ 0.9
RNF111-208ENST00000559757 PCDHB15Q9Y5E8 787 aa20.65■□□□□ 0.9
RNF111-208ENST00000559757 FOCADQ5VW36 1801 aa20.64■□□□□ 0.9
RNF111-208ENST00000559757 ATRNL1Q5VV63 1379 aa20.64■□□□□ 0.89
RNF111-208ENST00000559757 TRPA1O75762 1119 aa20.64■□□□□ 0.89
RNF111-208ENST00000559757 ATP5JP18859 108 aa20.64■□□□□ 0.89
RNF111-208ENST00000559757 CYP7A1P22680 504 aa20.64■□□□□ 0.89
RNF111-208ENST00000559757 DDX4Q9NQI0 724 aaKnown RBP20.64■□□□□ 0.89
RNF111-208ENST00000559757 TSKSQ9UJT2 592 aa20.64■□□□□ 0.89
RNF111-208ENST00000559757 NDUFB9Q9Y6M9 179 aa20.64■□□□□ 0.89
RNF111-208ENST00000559757 CDK5RAP2Q96SN8 1893 aa20.63■□□□□ 0.89
RNF111-208ENST00000559757 ALDH1A1P00352 501 aa20.63■□□□□ 0.89
RNF111-208ENST00000559757 ZFPM1Q8IX07 1006 aa20.63■□□□□ 0.89
RNF111-208ENST00000559757 GPATCH3Q96I76 525 aa20.63■□□□□ 0.89
RNF111-208ENST00000559757 DNAJC2Q99543 621 aaKnown RBP20.63■□□□□ 0.89
RNF111-208ENST00000559757 ANTXR1Q9H6X2 564 aa20.63■□□□□ 0.89
RNF111-208ENST00000559757 ZNF112Q9UJU3 913 aa20.63■□□□□ 0.89
RNF111-208ENST00000559757 SPDYE5A6NIY4 337 aa20.62■□□□□ 0.89
RNF111-208ENST00000559757 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
RNF111-208ENST00000559757 ERO1BQ86YB8 467 aa20.62■□□□□ 0.89
RNF111-208ENST00000559757 TNS4Q8IZW8 715 aa20.62■□□□□ 0.89
RNF111-208ENST00000559757 MAGEB6Q8N7X4 407 aa20.62■□□□□ 0.89
RNF111-208ENST00000559757 SH3RF3Q8TEJ3 882 aaPredicted RBP20.62■□□□□ 0.89
RNF111-208ENST00000559757 OSBPL5Q9H0X9 879 aaPredicted RBP20.62■□□□□ 0.89
RNF111-208ENST00000559757 SNCAIPQ9Y6H5 919 aa20.62■□□□□ 0.89
RNF111-208ENST00000559757 DDTLA6NHG4 134 aaPredicted RBP20.61■□□□□ 0.89
RNF111-208ENST00000559757 GOLIM4O00461 696 aa20.61■□□□□ 0.89
RNF111-208ENST00000559757 OTUD7BQ6GQQ9 843 aa20.61■□□□□ 0.89
RNF111-208ENST00000559757 SH3BP5LQ7L8J4 393 aa20.61■□□□□ 0.89
RNF111-208ENST00000559757 ADGRA1Q86SQ6 560 aa20.61■□□□□ 0.89
RNF111-208ENST00000559757 ZKSCAN4Q969J2 545 aaPredicted RBP20.61■□□□□ 0.89
RNF111-208ENST00000559757 PAG1Q9NWQ8 432 aa20.61■□□□□ 0.89
RNF111-208ENST00000559757 CASP8AP2Q9UKL3 1982 aa20.6■□□□□ 0.89
RNF111-208ENST00000559757 GJA5P36382 358 aa20.6■□□□□ 0.89
RNF111-208ENST00000559757 GTF2A2P52657 109 aa20.6■□□□□ 0.89
RNF111-208ENST00000559757 MAP3K10Q02779 954 aa20.6■□□□□ 0.89
RNF111-208ENST00000559757 NOL9Q5SY16 702 aaKnown RBP20.6■□□□□ 0.89
RNF111-208ENST00000559757 OTUD5Q96G74 571 aa20.6■□□□□ 0.89
RNF111-208ENST00000559757 HAUS7Q99871 368 aa20.6■□□□□ 0.89
RNF111-208ENST00000559757 DHX36Q9H2U1 1008 aaKnown RBP20.6■□□□□ 0.89
RNF111-208ENST00000559757 BOLA2Q9H3K6 86 aa20.6■□□□□ 0.89
RNF111-208ENST00000559757 ECHDC1Q9NTX5 307 aa20.6■□□□□ 0.89
RNF111-208ENST00000559757 ZBTB47Q9UFB7 747 aaPredicted RBP20.6■□□□□ 0.89
RNF111-208ENST00000559757 TBC1D12O60347 775 aa20.59■□□□□ 0.89
RNF111-208ENST00000559757 INPP5BP32019 993 aa20.59■□□□□ 0.89
RNF111-208ENST00000559757 PPATQ06203 517 aa20.59■□□□□ 0.89
RNF111-208ENST00000559757 SLC9C2Q5TAH2 1124 aa20.59■□□□□ 0.89
RNF111-208ENST00000559757 IFNL1Q8IU54 200 aa20.59■□□□□ 0.89
RNF111-208ENST00000559757 CFHR5Q9BXR6 569 aa20.59■□□□□ 0.89
RNF111-208ENST00000559757 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.89
RNF111-208ENST00000559757 MYH7P12883 1935 aa20.59■□□□□ 0.89
RNF111-208ENST00000559757 TESPA1A2RU30 521 aaPredicted RBP20.58■□□□□ 0.89
RNF111-208ENST00000559757 PPIL2Q13356 520 aa20.58■□□□□ 0.89
RNF111-208ENST00000559757 HDAC1Q13547 482 aaPredicted RBP20.58■□□□□ 0.89
RNF111-208ENST00000559757 TGFBRAP1Q8WUH2 860 aa20.58■□□□□ 0.89
RNF111-208ENST00000559757 GCC1Q96CN9 775 aa20.58■□□□□ 0.89
RNF111-208ENST00000559757 FLT1P17948 1338 aa20.57■□□□□ 0.88
RNF111-208ENST00000559757 PDE6AP16499 860 aa20.57■□□□□ 0.88
RNF111-208ENST00000559757 DOCK1Q14185 1865 aa20.57■□□□□ 0.88
RNF111-208ENST00000559757 NOM1Q5C9Z4 860 aaKnown RBP20.57■□□□□ 0.88
RNF111-208ENST00000559757 MIGA1Q8NAN2 632 aa20.57■□□□□ 0.88
RNF111-208ENST00000559757 CNKSR2Q8WXI2 1034 aa20.57■□□□□ 0.88
RNF111-208ENST00000559757 PI4KBQ9UBF8 816 aa20.57■□□□□ 0.88
RNF111-208ENST00000559757 HERC5Q9UII4 1024 aaKnown RBP20.57■□□□□ 0.88
RNF111-208ENST00000559757 PHF20L1A8MW92 1017 aa20.56■□□□□ 0.88
RNF111-208ENST00000559757 DYNLL1P63167 89 aaKnown RBP20.56■□□□□ 0.88
RNF111-208ENST00000559757 SNAPC2Q13487 334 aa20.56■□□□□ 0.88
RNF111-208ENST00000559757 ZSCAN25Q6NSZ9 544 aa20.56■□□□□ 0.88
RNF111-208ENST00000559757 MAPKAPK5Q8IW41 473 aa20.56■□□□□ 0.88
RNF111-208ENST00000559757 SCYL3Q8IZE3 742 aa20.56■□□□□ 0.88
RNF111-208ENST00000559757 MS4A4AQ96JQ5 239 aa20.56■□□□□ 0.88
RNF111-208ENST00000559757 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.56■□□□□ 0.88
RNF111-208ENST00000559757 PICK1Q9NRD5 415 aa20.56■□□□□ 0.88
RNF111-208ENST00000559757 SUPT16HQ9Y5B9 1047 aaKnown RBP20.56■□□□□ 0.88
RNF111-208ENST00000559757 MYH1P12882 1939 aa20.56■□□□□ 0.88
RNF111-208ENST00000559757 CCL15-CCL14A0A0B4J2E2 113 aa20.55■□□□□ 0.88
RNF111-208ENST00000559757 MAGEB6P1A0A0J9YX57 407 aa20.55■□□□□ 0.88
RNF111-208ENST00000559757 CTNND1O60716 968 aaKnown RBP20.55■□□□□ 0.88
RNF111-208ENST00000559757 CETPP11597 493 aa20.55■□□□□ 0.88
RNF111-208ENST00000559757 USP5P45974 858 aa20.55■□□□□ 0.88
RNF111-208ENST00000559757 CCL15Q16663 113 aa20.55■□□□□ 0.88
RNF111-208ENST00000559757 TTC41PQ6P2S7 1318 aa20.54■□□□□ 0.88
RNF111-208ENST00000559757 ZNF532Q9HCE3 1301 aa20.54■□□□□ 0.88
RNF111-208ENST00000559757 IGF2BP3O00425 579 aaKnown RBP eCLIP20.54■□□□□ 0.88
RNF111-208ENST00000559757 IRF6O14896 467 aa20.54■□□□□ 0.88
RNF111-208ENST00000559757 TBC1D8O95759 1140 aa20.54■□□□□ 0.88
RNF111-208ENST00000559757 HLA-DOAP06340 250 aa20.54■□□□□ 0.88
RNF111-208ENST00000559757 EDC3Q96F86 508 aaKnown RBP20.54■□□□□ 0.88
RNF111-208ENST00000559757 ERC2O15083 957 aa20.53■□□□□ 0.88
RNF111-208ENST00000559757 IFFO2Q5TF58 517 aa20.53■□□□□ 0.88
RNF111-208ENST00000559757 FOXP4Q8IVH2 680 aaPredicted RBP20.53■□□□□ 0.88
RNF111-208ENST00000559757 BRI3BPQ8WY22 251 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms