RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 HELBQ8NG08 1087 aaPredicted RBP8.04□□□□□ -1.12
USP3-210ENST00000559192 DSCC1Q9BVC3 393 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 TAB2Q9NYJ8 693 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 MORC2Q9Y6X9 1032 aaPredicted RBP8.04□□□□□ -1.12
USP3-210ENST00000559192 PPRC1Q5VV67 1664 aaKnown RBP8.04□□□□□ -1.12
USP3-210ENST00000559192 EBAG9O00559 213 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 GPAA1O43292 621 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 ARID4AP29374 1257 aaPredicted RBP8.04□□□□□ -1.12
USP3-210ENST00000559192 IFFO1Q0D2I5 559 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 ZNF790Q6PG37 636 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 BICDL1Q6ZP65 573 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 CEP57Q86XR8 500 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 BANK1Q8NDB2 785 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 IFT81Q8WYA0 676 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 XAGE2Q96GT9 111 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 BLZF1Q9H2G9 400 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 RMND1Q9NWS8 449 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 DBNLQ9UJU6 430 aaKnown RBP8.04□□□□□ -1.12
USP3-210ENST00000559192 IFIT1BQ5T764 474 aaKnown RBP8.04□□□□□ -1.12
USP3-210ENST00000559192 CYP26C1Q6V0L0 522 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 KRT28Q7Z3Y7 464 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 PRDM11Q9NQV5 511 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 YEATS2Q9ULM3 1422 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 PHLPP2Q6ZVD8 1323 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 PRR36Q9H6K5 1346 aa8.04□□□□□ -1.12
USP3-210ENST00000559192 STARD3NLO95772 234 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 IDEP14735 1019 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 ZNF274Q96GC6 653 aaPredicted RBP8.03□□□□□ -1.12
USP3-210ENST00000559192 EXOC1Q9NV70 894 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 RTEL1Q9NZ71 1219 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 ANGEL1Q9UNK9 670 aaKnown RBP8.03□□□□□ -1.12
USP3-210ENST00000559192 TTF2Q9UNY4 1162 aaKnown RBP8.03□□□□□ -1.12
USP3-210ENST00000559192 CAMSAP1Q5T5Y3 1602 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 ZC3H13Q5T200 1668 aaKnown RBP8.03□□□□□ -1.12
USP3-210ENST00000559192 hCG_1642624A0A1W2PR95 340 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 M0R2C6 588 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 KRT86O43790 486 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 AKR1B10O60218 316 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 DIS3L2Q8IYB7 885 aaKnown RBP8.03□□□□□ -1.12
USP3-210ENST00000559192 ATRIPQ8WXE1 791 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 GIGYF1O75420 1035 aaPredicted RBP8.03□□□□□ -1.12
USP3-210ENST00000559192 TSG101Q99816 390 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 HAUS7Q99871 368 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 CNNM2Q9H8M5 875 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 OPA1O60313 960 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 SASH1O94885 1247 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 CMA1P23946 247 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 UBA7P41226 1012 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 ZAP70P43403 619 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 KRT83P78385 493 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 SARM1Q6SZW1 724 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 PARD6BQ9BYG5 372 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 SUDS3Q9H7L9 328 aaPredicted RBP8.03□□□□□ -1.12
USP3-210ENST00000559192 RCOR1Q9UKL0 485 aa8.03□□□□□ -1.12
USP3-210ENST00000559192 ADD1P35611 737 aaKnown RBP8.02□□□□□ -1.12
USP3-210ENST00000559192 IRX5P78411 483 aaPredicted RBP8.02□□□□□ -1.12
USP3-210ENST00000559192 DAAM2Q86T65 1068 aa8.02□□□□□ -1.12
USP3-210ENST00000559192 GRAMD1CQ8IYS0 662 aa8.02□□□□□ -1.12
USP3-210ENST00000559192 MLKLQ8NB16 471 aa8.02□□□□□ -1.12
USP3-210ENST00000559192 GOLGA5Q8TBA6 731 aa8.02□□□□□ -1.12
USP3-210ENST00000559192 PSMB7Q99436 277 aa8.02□□□□□ -1.12
USP3-210ENST00000559192 GJB4Q9NTQ9 266 aa8.02□□□□□ -1.12
USP3-210ENST00000559192 LUC7L2Q9Y383 392 aaKnown RBP8.02□□□□□ -1.12
USP3-210ENST00000559192 GOLGA6CA6NDK9 693 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 EYA2O00167 538 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 MBD4O95243 580 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 GOLGA6DP0CG33 693 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 RBM6P78332 1123 aaKnown RBP8.02□□□□□ -1.13
USP3-210ENST00000559192 SPAG1Q07617 926 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 BRD3Q15059 726 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 ARMT1Q9H993 441 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 GOLGA6AQ9NYA3 693 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 RRP15Q9Y3B9 282 aaKnown RBP8.02□□□□□ -1.13
USP3-210ENST00000559192 SOWAHDA6NJG2 315 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 TMEM232C9JQI7 657 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 CTIFO43310 598 aaKnown RBP8.02□□□□□ -1.13
USP3-210ENST00000559192 KIF5AQ12840 1032 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 IKQ13123 557 aaPredicted RBP8.02□□□□□ -1.13
USP3-210ENST00000559192 NAA25Q14CX7 972 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 LONRF2Q1L5Z9 754 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 TOGARAM2Q6ZUX3 1019 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 FAM114A1Q8IWE2 563 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 IGSF1Q8N6C5 1336 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 SHPRHQ149N8 1683 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 KIAA1210Q9ULL0 1709 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 TACC1O75410 805 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 ARID5AQ03989 594 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 TTC19Q6DKK2 380 aaPredicted RBP8.02□□□□□ -1.13
USP3-210ENST00000559192 OTUD6BQ8N6M0 293 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 JAKMIP2Q96AA8 810 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 GPHNQ9NQX3 736 aaPredicted RBP8.02□□□□□ -1.13
USP3-210ENST00000559192 MYO3AQ8NEV4 1616 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 MROH2AA6NES4 1674 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 CYP7A1P22680 504 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 CCDC40Q4G0X9 1142 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 LINC00301Q8NCQ3 95 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 MMRN2Q9H8L6 949 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 ZCCHC17Q9NP64 241 aaKnown RBP8.02□□□□□ -1.13
USP3-210ENST00000559192 FAN1Q9Y2M0 1017 aa8.02□□□□□ -1.13
USP3-210ENST00000559192 CEP83Q9Y592 693 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 817.4 ms