RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 LGR6Q9HBX8 967 aa5.88□□□□□ -1.47
SPG11-206ENST00000558093 ATG3Q9NT62 314 aa5.88□□□□□ -1.47
SPG11-206ENST00000558093 DCDC2CA8MYV0 355 aa5.87□□□□□ -1.47
SPG11-206ENST00000558093 RLBP1P12271 317 aa5.87□□□□□ -1.47
SPG11-206ENST00000558093 GRIK1P39086 918 aa5.87□□□□□ -1.47
SPG11-206ENST00000558093 DIEXFQ68CQ4 756 aaKnown RBP5.87□□□□□ -1.47
SPG11-206ENST00000558093 SMYD4Q8IYR2 804 aaPredicted RBP5.87□□□□□ -1.47
SPG11-206ENST00000558093 GSX1Q9H4S2 264 aaPredicted RBP5.87□□□□□ -1.47
SPG11-206ENST00000558093 RNF112Q9ULX5 631 aa5.87□□□□□ -1.47
SPG11-206ENST00000558093 PCDHGC5Q9Y5F6 944 aa5.87□□□□□ -1.47
SPG11-206ENST00000558093 CSADQ9Y600 493 aa5.87□□□□□ -1.47
SPG11-206ENST00000558093 TGFB1P01137 390 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 CTSHP09668 335 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 LIG3P49916 1009 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 ST13P50502 369 aaKnown RBP5.86□□□□□ -1.47
SPG11-206ENST00000558093 ERVK-24P63145 666 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 ZC3H12AQ5D1E8 599 aaKnown RBP5.86□□□□□ -1.47
SPG11-206ENST00000558093 RASIP1Q5U651 963 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 SCARA3Q6AZY7 606 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 ZDHHC13Q8IUH4 622 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 METTL22Q9BUU2 404 aaPredicted RBP5.86□□□□□ -1.47
SPG11-206ENST00000558093 DISC1Q9NRI5 854 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 PRKAG2Q9UGJ0 569 aa5.86□□□□□ -1.47
SPG11-206ENST00000558093 PRAMEF27A3QJZ7 478 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 F13BP05160 661 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 RPS26P62854 115 aaKnown RBP5.85□□□□□ -1.47
SPG11-206ENST00000558093 LRP8Q14114 963 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 SEPT6Q14141 434 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 PPM1JQ5JR12 505 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 ZAR1Q86SH2 424 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 NOC4LQ9BVI4 516 aaKnown RBP5.85□□□□□ -1.47
SPG11-206ENST00000558093 MIR1-1HGQ9H1L0 117 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 PCMTD2Q9NV79 361 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 LEMD3Q9Y2U8 911 aa5.85□□□□□ -1.47
SPG11-206ENST00000558093 DYNC1LI2O43237 492 aaPredicted RBP5.84□□□□□ -1.47
SPG11-206ENST00000558093 COBLO75128 1261 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 SSTR4P31391 388 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 CYP27A1Q02318 531 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 WIPI1Q5MNZ9 446 aaPredicted RBP5.84□□□□□ -1.47
SPG11-206ENST00000558093 DUSP27Q5VZP5 1158 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 AGMOQ6ZNB7 445 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 CDC37L1Q7L3B6 337 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 HDXQ7Z353 690 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 C12orf40Q86WS4 652 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.84□□□□□ -1.47
SPG11-206ENST00000558093 RNF214Q8ND24 703 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 GAL3ST3Q96A11 431 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 ISL2Q96A47 359 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 PIM2Q9P1W9 311 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 PCOLCE2Q9UKZ9 415 aa5.84□□□□□ -1.47
SPG11-206ENST00000558093 USP31Q70CQ4 1352 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 FAM170BA6NMN3 283 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 F6X3S4 739 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 NEFMP07197 916 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 ZNF16P17020 682 aaPredicted RBP5.83□□□□□ -1.48
SPG11-206ENST00000558093 ADMP35318 185 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 CDK5R2Q13319 367 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 CPSF6Q16630 551 aaKnown RBP eCLIP5.83□□□□□ -1.48
SPG11-206ENST00000558093 RELL1Q8IUW5 271 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 Q8N3U1 123 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 PLPPR2Q96GM1 343 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 ZFP64Q9NPA5 681 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 CACNA2D2Q9NY47 1150 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 PCDHB5Q9Y5E4 795 aa5.83□□□□□ -1.48
SPG11-206ENST00000558093 FANCGO15287 622 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 BPNT1O95861 308 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 GBP2P32456 591 aaPredicted RBP5.82□□□□□ -1.48
SPG11-206ENST00000558093 ETF1P62495 437 aaKnown RBP5.82□□□□□ -1.48
SPG11-206ENST00000558093 PTPN11Q06124 597 aaPredicted RBP5.82□□□□□ -1.48
SPG11-206ENST00000558093 PWP1Q13610 501 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 INPP5AQ14642 412 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 INTS5Q6P9B9 1019 aaKnown RBP5.82□□□□□ -1.48
SPG11-206ENST00000558093 LRFN4Q6PJG9 635 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.82□□□□□ -1.48
SPG11-206ENST00000558093 ZNF765Q7L2R6 523 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 JARID2Q92833 1246 aaPredicted RBP5.82□□□□□ -1.48
SPG11-206ENST00000558093 LRRC4CQ9HCJ2 640 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 C1GALT1Q9NS00 363 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 TLR6Q9Y2C9 796 aa5.82□□□□□ -1.48
SPG11-206ENST00000558093 CYP26A1O43174 497 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 FAM87AP0C7U9 286 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 TFE3P19532 575 aaPredicted RBP5.81□□□□□ -1.48
SPG11-206ENST00000558093 CYP27C1Q4G0S4 372 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 ARTNQ5T4W7 220 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 ZBTB37Q5TC79 503 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 ARHGAP27Q6ZUM4 889 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 NBPF11Q86T75 865 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 SHISA5Q8N114 240 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 KCT2Q8NC54 265 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 SNCAIPQ9Y6H5 919 aa5.81□□□□□ -1.48
SPG11-206ENST00000558093 PRR19A6NJB7 356 aa5.8□□□□□ -1.48
SPG11-206ENST00000558093 CD97P48960 835 aa5.8□□□□□ -1.48
SPG11-206ENST00000558093 MRPL58Q14197 206 aaKnown RBP5.8□□□□□ -1.48
SPG11-206ENST00000558093 TSNAXIP1Q2TAA8 658 aa5.8□□□□□ -1.48
SPG11-206ENST00000558093 SNAP47Q5SQN1 464 aa5.8□□□□□ -1.48
SPG11-206ENST00000558093 SEZ6L2Q6UXD5 910 aa5.8□□□□□ -1.48
SPG11-206ENST00000558093 TOP6BLQ8N6T0 577 aa5.8□□□□□ -1.48
SPG11-206ENST00000558093 PHC3Q8NDX5 983 aa5.8□□□□□ -1.48
SPG11-206ENST00000558093 ZNF507Q8TCN5 953 aa5.8□□□□□ -1.48
SPG11-206ENST00000558093 GATA6Q92908 595 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms