RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 TMOD2Q9NZR1 351 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 CEP126Q9P2H0 1117 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 EXOC6BQ9Y2D4 811 aa13.96□□□□□ -0.17
TMEM116-218ENST00000552839 PDHXO00330 501 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 FRAT2O75474 233 aaPredicted RBP13.95□□□□□ -0.18
TMEM116-218ENST00000552839 FMNL1O95466 1100 aaPredicted RBP13.95□□□□□ -0.18
TMEM116-218ENST00000552839 GJB1P08034 283 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 CCL5P13501 91 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 HOXD10P28358 340 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 POLA2Q14181 598 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 FKBP1CQ5VVH2 108 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 DCAF15Q66K64 600 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 MIGA2Q7L4E1 593 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 RAET1EQ8TD07 263 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 HOOK2Q96ED9 719 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 CCDC136Q96JN2 1154 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 PCDHB15Q9Y5E8 787 aa13.95□□□□□ -0.18
TMEM116-218ENST00000552839 RPAP1Q9BWH6 1393 aaPredicted RBP13.95□□□□□ -0.18
TMEM116-218ENST00000552839 MYPNQ86TC9 1320 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 CIAO1O76071 339 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 RFX5P48382 616 aaPredicted RBP13.94□□□□□ -0.18
TMEM116-218ENST00000552839 BCAMP50895 628 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 LRRC24Q50LG9 513 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 CAVIN4Q5BKX8 364 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 ERICH6BQ5W0A0 696 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 HTATIP2Q9BUP3 242 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 ZNF341Q9BYN7 854 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 RNF208Q9H0X6 261 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 KCNH4Q9UQ05 1017 aa13.94□□□□□ -0.18
TMEM116-218ENST00000552839 RAB11FIP3O75154 756 aa13.93□□□□□ -0.18
TMEM116-218ENST00000552839 MOGSQ13724 837 aa13.93□□□□□ -0.18
TMEM116-218ENST00000552839 VGLL2Q8N8G2 317 aa13.93□□□□□ -0.18
TMEM116-218ENST00000552839 BIN2Q9UBW5 565 aaPredicted RBP13.93□□□□□ -0.18
TMEM116-218ENST00000552839 ZNF112Q9UJU3 913 aa13.93□□□□□ -0.18
TMEM116-218ENST00000552839 AKAP2Q9Y2D5 859 aa13.93□□□□□ -0.18
TMEM116-218ENST00000552839 DOCK3Q8IZD9 2030 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 SLC5A1P13866 664 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 UBXN2AP68543 259 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 PRKCZQ05513 592 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 HDAC1Q13547 482 aaPredicted RBP13.92□□□□□ -0.18
TMEM116-218ENST00000552839 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 HHIPL2Q6UWX4 724 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 U2AF1L4Q8WU68 220 aaKnown RBP13.92□□□□□ -0.18
TMEM116-218ENST00000552839 GABRQQ9UN88 632 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 SUGT1Q9Y2Z0 365 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 ALPK3Q96L96 1907 aa13.92□□□□□ -0.18
TMEM116-218ENST00000552839 MAST3O60307 1309 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 PDE8BO95263 885 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 IFIT1P09914 478 aaKnown RBP13.91□□□□□ -0.18
TMEM116-218ENST00000552839 BCRP11274 1271 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 TCP10Q12799 353 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 PUM3Q15397 648 aaKnown RBP13.91□□□□□ -0.18
TMEM116-218ENST00000552839 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 SLC17A8Q8NDX2 589 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 FAM151AQ8WW52 585 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 UNC93B1Q9H1C4 597 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 PPP4R2Q9NY27 417 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 NR2E3Q9Y5X4 410 aa13.91□□□□□ -0.18
TMEM116-218ENST00000552839 PTPRFP10586 1907 aa13.9□□□□□ -0.18
TMEM116-218ENST00000552839 DLL1O00548 723 aa13.9□□□□□ -0.18
TMEM116-218ENST00000552839 FARP2O94887 1054 aaPredicted RBP13.9□□□□□ -0.18
TMEM116-218ENST00000552839 CYP2C8P10632 490 aa13.9□□□□□ -0.18
TMEM116-218ENST00000552839 TFCP2Q12800 502 aa13.9□□□□□ -0.18
TMEM116-218ENST00000552839 NOL9Q5SY16 702 aaKnown RBP13.9□□□□□ -0.18
TMEM116-218ENST00000552839 SIRT2Q8IXJ6 389 aa13.9□□□□□ -0.18
TMEM116-218ENST00000552839 CLASRPQ8N2M8 674 aaKnown RBP13.9□□□□□ -0.18
TMEM116-218ENST00000552839 NEUROD6Q96NK8 337 aa13.9□□□□□ -0.18
TMEM116-218ENST00000552839 SOX1O00570 391 aaPredicted RBP13.89□□□□□ -0.19
TMEM116-218ENST00000552839 SGPL1O95470 568 aa13.89□□□□□ -0.19
TMEM116-218ENST00000552839 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
TMEM116-218ENST00000552839 FCGRTP55899 365 aa13.89□□□□□ -0.19
TMEM116-218ENST00000552839 SLAIN1Q8ND83 568 aa13.89□□□□□ -0.19
TMEM116-218ENST00000552839 PARK7Q99497 189 aaKnown RBP13.89□□□□□ -0.19
TMEM116-218ENST00000552839 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
TMEM116-218ENST00000552839 NOP58Q9Y2X3 529 aaKnown RBP13.89□□□□□ -0.19
TMEM116-218ENST00000552839 DOCK2Q92608 1830 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 CXCL11O14625 94 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 ADCY3O60266 1144 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 FGFR2P21802 821 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 NFIAQ12857 509 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 ANKRD45Q5TZF3 282 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 CDC42EP5Q6NZY7 148 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 ATG9AQ7Z3C6 839 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 AACSQ86V21 672 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 LPIN2Q92539 896 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 IL1RAPL2Q9NP60 686 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 DAGLAQ9Y4D2 1042 aa13.88□□□□□ -0.19
TMEM116-218ENST00000552839 PHIPQ8WWQ0 1821 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 A0A1W2PPC1 479 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 EVI5O60447 810 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 ELNP15502 786 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 FLT3LGP49771 235 aa13.87□□□□□ -0.19
TMEM116-218ENST00000552839 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms