RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 FAM89AQ96GI7 184 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 UTP14AQ9BVJ6 771 aaKnown RBP11.84□□□□□ -0.51
ERBB3-214ENST00000550070 AKAP11Q9UKA4 1901 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 ECM29Q5VYK3 1845 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 FAM237AA0A1B0GTK4 181 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 UBE2Q2LH0YL09 131 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 SH2B2O14492 632 aaPredicted RBP11.84□□□□□ -0.51
ERBB3-214ENST00000550070 TRDNQ13061 729 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 TCIRG1Q13488 830 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 CFAP100Q494V2 611 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 LONRF3Q496Y0 759 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 RESP18Q5W5W9 173 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 RINLQ6ZS11 566 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 VSTM4Q8IW00 320 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 RIPOR2Q9Y4F9 1068 aa11.84□□□□□ -0.51
ERBB3-214ENST00000550070 MYO5AQ9Y4I1 1855 aaKnown RBP11.84□□□□□ -0.51
ERBB3-214ENST00000550070 ADD2P35612 726 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 ARHGAP29Q52LW3 1261 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 APOA5Q6Q788 366 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 FHOD1Q9Y613 1164 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 PHLPP2Q6ZVD8 1323 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 CBFA2T2O43439 604 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 BMP6P22004 513 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 PDE4BQ07343 736 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
ERBB3-214ENST00000550070 BMS1Q14692 1282 aaKnown RBP11.83□□□□□ -0.52
ERBB3-214ENST00000550070 NTRK3Q16288 839 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 SPTY2D1Q68D10 685 aaPredicted RBP11.83□□□□□ -0.52
ERBB3-214ENST00000550070 SYNE4Q8N205 404 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
ERBB3-214ENST00000550070 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
ERBB3-214ENST00000550070 B4E1Z4 1266 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 FOXN1O15353 648 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 RANBP6O60518 1105 aaKnown RBP11.82□□□□□ -0.52
ERBB3-214ENST00000550070 CSF1RP07333 972 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 PIP4K2BP78356 416 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 SLC9C2Q5TAH2 1124 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 MICU3Q86XE3 530 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 TMEM139Q8IV31 216 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 ZCRB1Q8TBF4 217 aaKnown RBP11.82□□□□□ -0.52
ERBB3-214ENST00000550070 INCENPQ9NQS7 918 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
ERBB3-214ENST00000550070 INTS13Q9NVM9 706 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 PCDHA5Q9Y5H7 936 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 CCP110O43303 1012 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 IFIT5Q13325 482 aaKnown RBP11.82□□□□□ -0.52
ERBB3-214ENST00000550070 KRBA2Q6ZNG9 492 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 IGDCC4Q8TDY8 1250 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 MYL10Q9BUA6 226 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
ERBB3-214ENST00000550070 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.82□□□□□ -0.52
ERBB3-214ENST00000550070 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
ERBB3-214ENST00000550070 RIC1Q4ADV7 1423 aa11.82□□□□□ -0.52
ERBB3-214ENST00000550070 CUTAO60888 179 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 CDKL5O76039 1030 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 TOP1P11387 765 aaKnown RBP11.81□□□□□ -0.52
ERBB3-214ENST00000550070 HSP90AA4PQ58FG1 418 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 SPECC1Q5M775 1068 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 OLFM4Q6UX06 510 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 CNNM3Q8NE01 707 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 PIH1D3Q9NQM4 214 aaKnown RBP11.81□□□□□ -0.52
ERBB3-214ENST00000550070 KCNH3Q9ULD8 1083 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 PCDH11XQ9BZA7 1347 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 PCDH11YQ9BZA8 1340 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 VWA3AA6NCI4 1184 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 URI1O94763 535 aaPredicted RBP11.81□□□□□ -0.52
ERBB3-214ENST00000550070 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
ERBB3-214ENST00000550070 IARSP41252 1262 aaKnown RBP11.81□□□□□ -0.52
ERBB3-214ENST00000550070 MDM2Q00987 491 aaPredicted RBP11.81□□□□□ -0.52
ERBB3-214ENST00000550070 METTL24Q5JXM2 366 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 TSHZ1Q6ZSZ6 1077 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
ERBB3-214ENST00000550070 ZBTB43O43298 467 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 PNMA6AP0CW24 399 aaPredicted RBP11.8□□□□□ -0.52
ERBB3-214ENST00000550070 UBXN4Q92575 508 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 PLA2G12BQ9BX93 195 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 LY9Q9HBG7 655 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 PAPPAQ13219 1627 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 TADA3O75528 432 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 IDH1O75874 414 aaKnown RBP11.8□□□□□ -0.52
ERBB3-214ENST00000550070 ZRANB2O95218 330 aaKnown RBP eCLIP11.8□□□□□ -0.52
ERBB3-214ENST00000550070 PLA2G4AP47712 749 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 TRIM28Q13263 835 aaKnown RBP11.8□□□□□ -0.52
ERBB3-214ENST00000550070 CPLX2Q6PUV4 134 aaKnown RBP11.8□□□□□ -0.52
ERBB3-214ENST00000550070 LDHAL6AQ6ZMR3 332 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 PPP2R2CQ9Y2T4 447 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 GOLGA8AA7E2F4 631 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 GRIN1Q05586 938 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 TBX2Q13207 712 aaPredicted RBP11.8□□□□□ -0.52
ERBB3-214ENST00000550070 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 FCHSD1Q86WN1 690 aa11.8□□□□□ -0.52
ERBB3-214ENST00000550070 STK11IPQ8N1F8 1099 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms