RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 RAI14Q9P0K7 980 aa14□□□□□ -0.17
VTN-203ENST00000542029 LRP2BPQ9P2M1 347 aa14□□□□□ -0.17
VTN-203ENST00000542029 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
VTN-203ENST00000542029 GNRH1P01148 92 aa13.99□□□□□ -0.17
VTN-203ENST00000542029 TNNI3KQ59H18 835 aa13.99□□□□□ -0.17
VTN-203ENST00000542029 TTC39AQ5SRH9 613 aa13.99□□□□□ -0.17
VTN-203ENST00000542029 ZFPM1Q8IX07 1006 aa13.99□□□□□ -0.17
VTN-203ENST00000542029 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.99□□□□□ -0.17
VTN-203ENST00000542029 NSUN4Q96CB9 384 aaKnown RBP13.99□□□□□ -0.17
VTN-203ENST00000542029 ZNF512BQ96KM6 892 aaPredicted RBP13.99□□□□□ -0.17
VTN-203ENST00000542029 NOL10Q9BSC4 688 aaKnown RBP13.99□□□□□ -0.17
VTN-203ENST00000542029 FPGT-TNNI3KV9GXZ4 949 aa13.99□□□□□ -0.17
VTN-203ENST00000542029 PHF20L1A8MW92 1017 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 TBC1D12O60347 775 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 CTNND1O60716 968 aaKnown RBP13.98□□□□□ -0.17
VTN-203ENST00000542029 BAG3O95817 575 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 PLCG2P16885 1265 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 MCAMP43121 646 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 PRMT2P55345 433 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 RHBDL3P58872 404 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 FASTKD5Q7L8L6 764 aaKnown RBP13.98□□□□□ -0.17
VTN-203ENST00000542029 NBPF11Q86T75 865 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 SCYL3Q8IZE3 742 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 ARMC5Q96C12 935 aa13.98□□□□□ -0.17
VTN-203ENST00000542029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.98□□□□□ -0.17
VTN-203ENST00000542029 RFX7Q2KHR2 1363 aa13.97□□□□□ -0.17
VTN-203ENST00000542029 ATRNL1Q5VV63 1379 aa13.97□□□□□ -0.17
VTN-203ENST00000542029 PICALMQ13492 652 aa13.97□□□□□ -0.17
VTN-203ENST00000542029 HSP90AB4PQ58FF6 505 aa13.97□□□□□ -0.17
VTN-203ENST00000542029 PI16Q6UXB8 463 aa13.97□□□□□ -0.17
VTN-203ENST00000542029 TBC1D9Q6ZT07 1266 aa13.97□□□□□ -0.17
VTN-203ENST00000542029 ERC1Q8IUD2 1116 aa13.97□□□□□ -0.17
VTN-203ENST00000542029 PARK7Q99497 189 aaKnown RBP13.97□□□□□ -0.17
VTN-203ENST00000542029 ZHX2Q9Y6X8 837 aa13.97□□□□□ -0.17
VTN-203ENST00000542029 DDTLA6NHG4 134 aaPredicted RBP13.96□□□□□ -0.17
VTN-203ENST00000542029 PDHXO00330 501 aa13.96□□□□□ -0.17
VTN-203ENST00000542029 RLBP1P12271 317 aa13.96□□□□□ -0.17
VTN-203ENST00000542029 PTPRAP18433 802 aa13.96□□□□□ -0.17
VTN-203ENST00000542029 HOXD10P28358 340 aa13.96□□□□□ -0.17
VTN-203ENST00000542029 LACTBP83111 547 aaPredicted RBP13.96□□□□□ -0.17
VTN-203ENST00000542029 NAA16Q6N069 864 aaPredicted RBP13.96□□□□□ -0.17
VTN-203ENST00000542029 TMED8Q6PL24 325 aaPredicted RBP13.96□□□□□ -0.17
VTN-203ENST00000542029 C17orf99Q6UX52 265 aa13.96□□□□□ -0.17
VTN-203ENST00000542029 SH3BP5LQ7L8J4 393 aa13.96□□□□□ -0.17
VTN-203ENST00000542029 DBNDD2Q9BQY9 259 aa13.96□□□□□ -0.17
VTN-203ENST00000542029 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
VTN-203ENST00000542029 C1orf115Q9H7X2 142 aa13.96□□□□□ -0.17
VTN-203ENST00000542029 DDX4Q9NQI0 724 aaKnown RBP13.96□□□□□ -0.17
VTN-203ENST00000542029 PPP4CP60510 307 aa13.95□□□□□ -0.18
VTN-203ENST00000542029 CEP85Q6P2H3 762 aa13.95□□□□□ -0.18
VTN-203ENST00000542029 CERS3Q8IU89 383 aa13.95□□□□□ -0.18
VTN-203ENST00000542029 TEX11Q8IYF3 940 aa13.95□□□□□ -0.18
VTN-203ENST00000542029 ZNF384Q8TF68 577 aa13.95□□□□□ -0.18
VTN-203ENST00000542029 TMEM106CQ9BVX2 250 aa13.95□□□□□ -0.18
VTN-203ENST00000542029 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
VTN-203ENST00000542029 OSBPL5Q9H0X9 879 aaPredicted RBP13.95□□□□□ -0.18
VTN-203ENST00000542029 DHX36Q9H2U1 1008 aaKnown RBP13.95□□□□□ -0.18
VTN-203ENST00000542029 SLC45A1Q9Y2W3 748 aa13.95□□□□□ -0.18
VTN-203ENST00000542029 A0A0G2JLL6 359 aaPredicted RBP13.94□□□□□ -0.18
VTN-203ENST00000542029 SLC9C1Q4G0N8 1177 aa13.94□□□□□ -0.18
VTN-203ENST00000542029 PRRT2Q7Z6L0 340 aaPredicted RBP13.94□□□□□ -0.18
VTN-203ENST00000542029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.94□□□□□ -0.18
VTN-203ENST00000542029 HERC5Q9UII4 1024 aaKnown RBP13.94□□□□□ -0.18
VTN-203ENST00000542029 AFG3L2Q9Y4W6 797 aa13.94□□□□□ -0.18
VTN-203ENST00000542029 COL2A1P02458 1487 aaPredicted RBP13.93□□□□□ -0.18
VTN-203ENST00000542029 HMMRO75330 724 aa13.93□□□□□ -0.18
VTN-203ENST00000542029 MOGSQ13724 837 aa13.93□□□□□ -0.18
VTN-203ENST00000542029 RPAP2Q8IXW5 612 aaPredicted RBP13.93□□□□□ -0.18
VTN-203ENST00000542029 SNRKQ9NRH2 765 aa13.93□□□□□ -0.18
VTN-203ENST00000542029 PI4KBQ9UBF8 816 aa13.93□□□□□ -0.18
VTN-203ENST00000542029 DBNLQ9UJU6 430 aaKnown RBP13.93□□□□□ -0.18
VTN-203ENST00000542029 DDX19BQ9UMR2 479 aa13.93□□□□□ -0.18
VTN-203ENST00000542029 PTCH2Q9Y6C5 1203 aa13.93□□□□□ -0.18
VTN-203ENST00000542029 CYP2E1P05181 493 aaPredicted RBP13.92□□□□□ -0.18
VTN-203ENST00000542029 GPAT2Q6NUI2 795 aa13.92□□□□□ -0.18
VTN-203ENST00000542029 PANK1Q8TE04 598 aa13.92□□□□□ -0.18
VTN-203ENST00000542029 EAF2Q96CJ1 260 aaPredicted RBP13.92□□□□□ -0.18
VTN-203ENST00000542029 ZNF333Q96JL9 665 aa13.92□□□□□ -0.18
VTN-203ENST00000542029 AATFQ9NY61 560 aaKnown RBP eCLIP13.92□□□□□ -0.18
VTN-203ENST00000542029 CPA4Q9UI42 421 aa13.92□□□□□ -0.18
VTN-203ENST00000542029 PDE4DIPQ5VU43 2346 aa13.92□□□□□ -0.18
VTN-203ENST00000542029 ZAP70P43403 619 aa13.91□□□□□ -0.18
VTN-203ENST00000542029 PSMC4P43686 418 aa13.91□□□□□ -0.18
VTN-203ENST00000542029 CAP1Q01518 475 aa13.91□□□□□ -0.18
VTN-203ENST00000542029 PRPF38BQ5VTL8 546 aaKnown RBP13.91□□□□□ -0.18
VTN-203ENST00000542029 FOXP4Q8IVH2 680 aaPredicted RBP13.91□□□□□ -0.18
VTN-203ENST00000542029 CCDC8Q9H0W5 538 aaPredicted RBP13.91□□□□□ -0.18
VTN-203ENST00000542029 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
VTN-203ENST00000542029 SRRDQ9UH36 339 aa13.91□□□□□ -0.18
VTN-203ENST00000542029 OTOFQ9HC10 1997 aa13.91□□□□□ -0.18
VTN-203ENST00000542029 ADGRA2Q96PE1 1338 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 TRIM75PA6NK02 468 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 FMNL1O95466 1100 aaPredicted RBP13.9□□□□□ -0.18
VTN-203ENST00000542029 BCRP11274 1271 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 CAP2P40123 477 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 FCGRTP55899 365 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 MAP3K12Q12852 859 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 PABPC4Q13310 644 aaKnown RBP eCLIP13.9□□□□□ -0.18
VTN-203ENST00000542029 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
VTN-203ENST00000542029 AACSQ86V21 672 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms