RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CTNND2Q9UQB3 1225 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 CCT6AP40227 531 aaKnown RBP14.71□□□□□ -0.05
DNMT1-203ENST00000540357 CCDC178Q5BJE1 867 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 DHX40Q8IX18 779 aaKnown RBP14.71□□□□□ -0.05
DNMT1-203ENST00000540357 FTOQ9C0B1 505 aaKnown RBP eCLIP14.71□□□□□ -0.059e-7■■■□□ 15.1
DNMT1-203ENST00000540357 FRMPD1Q5SYB0 1578 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 SHPRHQ149N8 1683 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 CALM1P0DP23 149 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 CALM2P0DP24 149 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 CALM3P0DP25 149 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 DIS3L2Q8IYB7 885 aaKnown RBP14.71□□□□□ -0.05
DNMT1-203ENST00000540357 TBX22Q9Y458 520 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 ALKQ9UM73 1620 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 SH3TC1Q8TE82 1336 aa14.71□□□□□ -0.05
DNMT1-203ENST00000540357 VAV2P52735 878 aa14.71□□□□□ -0.06
DNMT1-203ENST00000540357 IFFO1Q0D2I5 559 aa14.71□□□□□ -0.06
DNMT1-203ENST00000540357 CABP5Q9NP86 173 aa14.71□□□□□ -0.06
DNMT1-203ENST00000540357 TRMT112Q9UI30 125 aaKnown RBP14.71□□□□□ -0.06
DNMT1-203ENST00000540357 BICDL2A1A5D9 508 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 DESI2Q9BSY9 194 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 RAB34Q9BZG1 259 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 PDE11AQ9HCR9 933 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 RRP15Q9Y3B9 282 aaKnown RBP14.7□□□□□ -0.06
DNMT1-203ENST00000540357 CRB1P82279 1406 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 GPAA1O43292 621 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 KCNQ3O43525 872 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 NF2P35240 595 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 NBPF6Q5VWK0 638 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 WWC2Q6AWC2 1192 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 TICAM2Q86XR7 235 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 NBPF4Q96M43 638 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 ZMYM6O95789 1325 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 PXDNLA1KZ92 1463 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 PTPRMP28827 1452 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 TSGA10IPQ3SY00 556 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 VPS36Q86VN1 386 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 PARD6BQ9BYG5 372 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 EFCC1Q9HA90 598 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 SLC4A4Q9Y6R1 1079 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 CT47A1Q5JQC4 288 aaPredicted RBP14.7□□□□□ -0.06
DNMT1-203ENST00000540357 CALML4Q96GE6 196 aa14.7□□□□□ -0.06
DNMT1-203ENST00000540357 DBNLQ9UJU6 430 aaKnown RBP14.7□□□□□ -0.06
DNMT1-203ENST00000540357 IDEP14735 1019 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 PLCD1P51178 756 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 IQCB1Q15051 598 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 IFIT1BQ5T764 474 aaKnown RBP14.69□□□□□ -0.06
DNMT1-203ENST00000540357 ARFGAP2Q8N6H7 521 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 TMOD3Q9NYL9 352 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 B4E1Z4 1266 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 TRMT44Q8IYL2 757 aaKnown RBP14.69□□□□□ -0.06
DNMT1-203ENST00000540357 DCAF5Q96JK2 942 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 GOLPH3LQ9H4A5 285 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 SERTAD1Q9UHV2 236 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 A0A087WWV3 80 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 GOLGA6BA6NDN3 693 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 BCCIPQ9P287 314 aaKnown RBP eCLIP14.69□□□□□ -0.06
DNMT1-203ENST00000540357 MYO1AQ9UBC5 1043 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 IFI16Q16666 785 aaKnown RBP14.69□□□□□ -0.06
DNMT1-203ENST00000540357 SPECC1Q5M775 1068 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 ZMYM1Q5SVZ6 1142 aa14.69□□□□□ -0.06
DNMT1-203ENST00000540357 INPP5BP32019 993 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 CCZ1BP86790 482 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 CCZ1P86791 482 aaPredicted RBP14.68□□□□□ -0.06
DNMT1-203ENST00000540357 PAK1Q13153 545 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 TMEM266Q2M3C6 531 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 KRT28Q7Z3Y7 464 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 IPO4Q8TEX9 1081 aaKnown RBP14.68□□□□□ -0.06
DNMT1-203ENST00000540357 LRRC27Q9C0I9 530 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 TMX4Q9H1E5 349 aaPredicted RBP14.68□□□□□ -0.06
DNMT1-203ENST00000540357 VPS16Q9H269 839 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 RFX7Q2KHR2 1363 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 SASH1O94885 1247 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 PPFIA1Q13136 1202 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 XAGE2Q96GT9 111 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 C19orf44Q9H6X5 657 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 ABCA9Q8IUA7 1624 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 KRT9P35527 623 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 PHKBQ93100 1093 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 JAKMIP2Q96AA8 810 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.68□□□□□ -0.06
DNMT1-203ENST00000540357 NUP58Q9BVL2 599 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 RBM28Q9NW13 759 aaKnown RBP14.68□□□□□ -0.06
DNMT1-203ENST00000540357 ERCC6L2Q5T890 1561 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 PRR36Q9H6K5 1346 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 DNA2P51530 1060 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 CAVIN4Q5BKX8 364 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 CCDC121Q6ZUS5 278 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 FMR1NBQ8N0W7 255 aaPredicted RBP14.68□□□□□ -0.06
DNMT1-203ENST00000540357 FERMT2Q96AC1 680 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 GPR108Q9NPR9 543 aa14.68□□□□□ -0.06
DNMT1-203ENST00000540357 CC2D1AQ6P1N0 951 aaPredicted RBP14.67□□□□□ -0.06
DNMT1-203ENST00000540357 NOSTRINQ8IVI9 506 aa14.67□□□□□ -0.06
DNMT1-203ENST00000540357 ATRIPQ8WXE1 791 aa14.67□□□□□ -0.06
DNMT1-203ENST00000540357 TMEM2Q9UHN6 1383 aa14.67□□□□□ -0.06
DNMT1-203ENST00000540357 ERCC5P28715 1186 aaPredicted RBP14.67□□□□□ -0.06
DNMT1-203ENST00000540357 CYP2C19P33261 490 aa14.67□□□□□ -0.06
DNMT1-203ENST00000540357 PPP1R2P41236 205 aa14.67□□□□□ -0.06
DNMT1-203ENST00000540357 DRC1Q96MC2 740 aa14.67□□□□□ -0.06
DNMT1-203ENST00000540357 SLC52A2Q9HAB3 445 aa14.67□□□□□ -0.06
DNMT1-203ENST00000540357 SEC63Q9UGP8 760 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms