RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 WNK4Q96J92 1243 aa10.07□□□□□ -0.8
LINC00958-207ENST00000534477 TDRD3Q9H7E2 651 aaKnown RBP10.07□□□□□ -0.8
LINC00958-207ENST00000534477 ELP3Q9H9T3 547 aa10.07□□□□□ -0.8
LINC00958-207ENST00000534477 TRIM17Q9Y577 477 aa10.07□□□□□ -0.8
LINC00958-207ENST00000534477 ECM29Q5VYK3 1845 aa10.07□□□□□ -0.8
LINC00958-207ENST00000534477 IRS2Q9Y4H2 1338 aa10.07□□□□□ -0.8
LINC00958-207ENST00000534477 COL1A1P02452 1464 aaPredicted RBP10.06□□□□□ -0.8
LINC00958-207ENST00000534477 MANSC4A6NHS7 340 aaPredicted RBP10.06□□□□□ -0.8
LINC00958-207ENST00000534477 ALDH1L1O75891 902 aa10.06□□□□□ -0.8
LINC00958-207ENST00000534477 NBPF7P0C2Y1 421 aaPredicted RBP10.06□□□□□ -0.8
LINC00958-207ENST00000534477 MMP14P50281 582 aa10.06□□□□□ -0.8
LINC00958-207ENST00000534477 PKN2Q16513 984 aaKnown RBP10.06□□□□□ -0.8
LINC00958-207ENST00000534477 SH3D19Q5HYK7 790 aa10.06□□□□□ -0.8
LINC00958-207ENST00000534477 METTL24Q5JXM2 366 aa10.06□□□□□ -0.8
LINC00958-207ENST00000534477 LDLRAD1Q5T700 205 aa10.06□□□□□ -0.8
LINC00958-207ENST00000534477 C15orf52Q6ZUT6 534 aaKnown RBP10.06□□□□□ -0.8
LINC00958-207ENST00000534477 PCMTD1Q96MG8 357 aaPredicted RBP10.06□□□□□ -0.8
LINC00958-207ENST00000534477 BICC1Q9H694 974 aaKnown RBP10.06□□□□□ -0.8
LINC00958-207ENST00000534477 TMEM134Q9H6X4 195 aa10.06□□□□□ -0.8
LINC00958-207ENST00000534477 PPP2R3BQ9Y5P8 575 aa10.06□□□□□ -0.8
LINC00958-207ENST00000534477 IGF2BP3O00425 579 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00958-207ENST00000534477 ALDH1A1P00352 501 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 CRKP46108 304 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 CACNB3P54284 484 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 LRRC24Q50LG9 513 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 FBXO46Q6PJ61 603 aaPredicted RBP10.05□□□□□ -0.8
LINC00958-207ENST00000534477 ZNF687Q8N1G0 1237 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 KLHDC4Q8TBB5 520 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 SLC4A5Q9BY07 1137 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 KIAA1468Q9P260 1216 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 ZNF70Q9UC06 446 aaPredicted RBP10.05□□□□□ -0.8
LINC00958-207ENST00000534477 RABGEF1Q9UJ41 708 aa10.05□□□□□ -0.8
LINC00958-207ENST00000534477 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 SMAPO00193 183 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 USP2O75604 605 aaPredicted RBP10.04□□□□□ -0.8
LINC00958-207ENST00000534477 TNFAIP1Q13829 316 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 UBE4AQ14139 1066 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 CAVIN4Q5BKX8 364 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 DZIP1LQ8IYY4 767 aaKnown RBP10.04□□□□□ -0.8
LINC00958-207ENST00000534477 ANKRD13AQ8IZ07 590 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 MTMR14Q8NCE2 650 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 TDRD7Q8NHU6 1098 aaKnown RBP10.04□□□□□ -0.8
LINC00958-207ENST00000534477 CD99L2Q8TCZ2 262 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 OPTNQ96CV9 577 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 FAM84BQ96KN1 310 aaPredicted RBP10.04□□□□□ -0.8
LINC00958-207ENST00000534477 TMEM39BQ9GZU3 492 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 MROH5Q6ZUA9 1318 aa10.04□□□□□ -0.8
LINC00958-207ENST00000534477 MYCP01106 439 aaPredicted RBP10.03□□□□□ -0.8
LINC00958-207ENST00000534477 ZBTB48P10074 688 aaPredicted RBP10.03□□□□□ -0.8
LINC00958-207ENST00000534477 GJA5P36382 358 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 TNNI2P48788 182 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 FKBP1AP62942 108 aaKnown RBP10.03□□□□□ -0.8
LINC00958-207ENST00000534477 CRHR2Q13324 411 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 DIXDC1Q155Q3 683 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 GRIK5Q16478 980 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 OTUD7BQ6GQQ9 843 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 POTEEQ6S8J3 1075 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 FAM205AQ6ZU69 1335 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 OTOFQ9HC10 1997 aa10.03□□□□□ -0.8
LINC00958-207ENST00000534477 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 BCAMP50895 628 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 INHBEP58166 350 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 MAP3K11Q16584 847 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 OTOP1Q7RTM1 612 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
LINC00958-207ENST00000534477 ERO1AQ96HE7 468 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 KAZALD1Q96I82 304 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 TMOD2Q9NZR1 351 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 SERPINA10Q9UK55 444 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 RIPOR2Q9Y4F9 1068 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 CSADQ9Y600 493 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 ARAP2Q8WZ64 1704 aa10.02□□□□□ -0.81
LINC00958-207ENST00000534477 PDE4DIPQ5VU43 2346 aa10.01□□□□□ -0.81
LINC00958-207ENST00000534477 CCL15-CCL14A0A0B4J2E2 113 aa10.01□□□□□ -0.81
LINC00958-207ENST00000534477 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
LINC00958-207ENST00000534477 VGLL4Q14135 290 aa10.01□□□□□ -0.81
LINC00958-207ENST00000534477 TAF1CQ15572 869 aaPredicted RBP10.01□□□□□ -0.81
LINC00958-207ENST00000534477 CCL15Q16663 113 aa10.01□□□□□ -0.81
LINC00958-207ENST00000534477 ANKRD44Q8N8A2 993 aa10.01□□□□□ -0.81
LINC00958-207ENST00000534477 TEKT1Q969V4 418 aa10.01□□□□□ -0.81
LINC00958-207ENST00000534477 SIL1Q9H173 461 aa10.01□□□□□ -0.81
LINC00958-207ENST00000534477 PDE8BO95263 885 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 IFIT1P09914 478 aaKnown RBP10□□□□□ -0.81
LINC00958-207ENST00000534477 CD46P15529 392 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 SP3Q02447 781 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 PRPF38BQ5VTL8 546 aaKnown RBP10□□□□□ -0.81
LINC00958-207ENST00000534477 TBC1D22AQ8WUA7 517 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 SSH1Q8WYL5 1049 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 WRNIP1Q96S55 665 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 PTPN18Q99952 460 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 NBPF3Q9H094 633 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 EFCC1Q9HA90 598 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 SMC4Q9NTJ3 1288 aa10□□□□□ -0.81
LINC00958-207ENST00000534477 AK9Q5TCS8 1911 aa9.99□□□□□ -0.81
LINC00958-207ENST00000534477 SLC5A1P13866 664 aa9.99□□□□□ -0.81
LINC00958-207ENST00000534477 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
LINC00958-207ENST00000534477 TCP10Q12799 353 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms