RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PAPPA2Q9BXP8 1791 aa14.49□□□□□ -0.09
SSBP3-214ENST00000533209 RNF113AO15541 343 aaKnown RBP14.48□□□□□ -0.09
SSBP3-214ENST00000533209 PPP1R12BO60237 982 aaPredicted RBP14.48□□□□□ -0.09
SSBP3-214ENST00000533209 LDLRAD1Q5T700 205 aa14.48□□□□□ -0.09
SSBP3-214ENST00000533209 ERICH6BQ5W0A0 696 aa14.48□□□□□ -0.09
SSBP3-214ENST00000533209 ARMC9Q7Z3E5 817 aa14.48□□□□□ -0.09
SSBP3-214ENST00000533209 TGFBRAP1Q8WUH2 860 aa14.48□□□□□ -0.09
SSBP3-214ENST00000533209 EVI5LQ96CN4 794 aa14.48□□□□□ -0.09
SSBP3-214ENST00000533209 KLRG1Q96E93 195 aa14.48□□□□□ -0.09
SSBP3-214ENST00000533209 CCDC136Q96JN2 1154 aa14.48□□□□□ -0.09
SSBP3-214ENST00000533209 FSD1Q9BTV5 496 aa14.48□□□□□ -0.09
SSBP3-214ENST00000533209 OSBPL5Q9H0X9 879 aaPredicted RBP14.48□□□□□ -0.09
SSBP3-214ENST00000533209 ANGEL1Q9UNK9 670 aaKnown RBP14.48□□□□□ -0.09
SSBP3-214ENST00000533209 ATRNL1Q5VV63 1379 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 FLT1P17948 1338 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 MBD4O95243 580 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 ZFYP08048 801 aaPredicted RBP14.47□□□□□ -0.09
SSBP3-214ENST00000533209 VEGFBP49765 207 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 MAPKAPK5Q8IW41 473 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 LCORLQ8N3X6 602 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 HOOK2Q96ED9 719 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 CSRNP1Q96S65 589 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 PUS7LQ9H0K6 701 aaKnown RBP14.47□□□□□ -0.09
SSBP3-214ENST00000533209 ARMT1Q9H993 441 aa14.47□□□□□ -0.09
SSBP3-214ENST00000533209 COL2A1P02458 1487 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-214ENST00000533209 IREB2P48200 963 aaKnown RBP14.46□□□□□ -0.09
SSBP3-214ENST00000533209 LRRFIP1Q32MZ4 808 aaKnown RBP14.46□□□□□ -0.09
SSBP3-214ENST00000533209 CYP4F22Q6NT55 531 aa14.46□□□□□ -0.09
SSBP3-214ENST00000533209 RGMBQ6NW40 437 aa14.46□□□□□ -0.09
SSBP3-214ENST00000533209 MIGA2Q7L4E1 593 aa14.46□□□□□ -0.09
SSBP3-214ENST00000533209 ZSCAN29Q8IWY8 852 aaPredicted RBP14.46□□□□□ -0.09
SSBP3-214ENST00000533209 APPBP2Q92624 585 aa14.46□□□□□ -0.09
SSBP3-214ENST00000533209 OSBP2Q969R2 916 aa14.46□□□□□ -0.09
SSBP3-214ENST00000533209 CAPNS2Q96L46 248 aa14.46□□□□□ -0.09
SSBP3-214ENST00000533209 CRNKL1Q9BZJ0 848 aaKnown RBP14.46□□□□□ -0.09
SSBP3-214ENST00000533209 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
SSBP3-214ENST00000533209 SLURP2P0DP57 97 aa14.45□□□□□ -0.1
SSBP3-214ENST00000533209 USP5P45974 858 aa14.45□□□□□ -0.1
SSBP3-214ENST00000533209 MAP3K10Q02779 954 aa14.45□□□□□ -0.1
SSBP3-214ENST00000533209 ZMYM1Q5SVZ6 1142 aa14.45□□□□□ -0.1
SSBP3-214ENST00000533209 DCAF15Q66K64 600 aa14.45□□□□□ -0.1
SSBP3-214ENST00000533209 PAXIP1Q6ZW49 1069 aaPredicted RBP14.45□□□□□ -0.1
SSBP3-214ENST00000533209 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.1
SSBP3-214ENST00000533209 CLMNQ96JQ2 1002 aa14.45□□□□□ -0.1
SSBP3-214ENST00000533209 UNCXA6NJT0 531 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 FAM155AB1AL88 458 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-214ENST00000533209 PRKAB2O43741 272 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 GSPT1P15170 499 aaKnown RBP14.44□□□□□ -0.1
SSBP3-214ENST00000533209 ZNF157P51786 506 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-214ENST00000533209 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-214ENST00000533209 RILPL2Q969X0 211 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 AIDAQ96BJ3 306 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 STRBPQ96SI9 672 aaKnown RBP14.44□□□□□ -0.1
SSBP3-214ENST00000533209 ZNF341Q9BYN7 854 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 DHX36Q9H2U1 1008 aaKnown RBP14.44□□□□□ -0.1
SSBP3-214ENST00000533209 PPP4R2Q9NY27 417 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 SAP30BPQ9UHR5 308 aaKnown RBP14.44□□□□□ -0.1
SSBP3-214ENST00000533209 ZNF112Q9UJU3 913 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 PALD1Q9ULE6 856 aa14.44□□□□□ -0.1
SSBP3-214ENST00000533209 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
SSBP3-214ENST00000533209 M0R2C6 588 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 TBC1D12O60347 775 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 SLC10A3P09131 477 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 ECE1P42892 770 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 MAP3K9P80192 1104 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 SKAP1Q86WV1 359 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 TICAM2Q86XR7 235 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 RASAL3Q86YV0 1011 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 ANKRD13AQ8IZ07 590 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 SDR42E1Q8WUS8 393 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 CCDC102AQ96A19 550 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 WRNIP1Q96S55 665 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 SEC62Q99442 399 aaKnown RBP14.43□□□□□ -0.1
SSBP3-214ENST00000533209 DCP1AQ9NPI6 582 aaPredicted RBP14.43□□□□□ -0.1
SSBP3-214ENST00000533209 MYH7P12883 1935 aa14.43□□□□□ -0.1
SSBP3-214ENST00000533209 PHF20L1A8MW92 1017 aa14.42□□□□□ -0.1
SSBP3-214ENST00000533209 AOC2O75106 756 aa14.42□□□□□ -0.1
SSBP3-214ENST00000533209 GRM1Q13255 1194 aa14.42□□□□□ -0.1
SSBP3-214ENST00000533209 METTL16Q86W50 562 aaKnown RBP14.42□□□□□ -0.1
SSBP3-214ENST00000533209 JMYQ8N9B5 988 aa14.42□□□□□ -0.1
SSBP3-214ENST00000533209 SLC10A4Q96EP9 437 aa14.42□□□□□ -0.1
SSBP3-214ENST00000533209 ATP8A2Q9NTI2 1148 aa14.42□□□□□ -0.1
SSBP3-214ENST00000533209 PI4KBQ9UBF8 816 aa14.42□□□□□ -0.1
SSBP3-214ENST00000533209 SLC4A4Q9Y6R1 1079 aa14.42□□□□□ -0.1
SSBP3-214ENST00000533209 FAM196BA6NMK8 535 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 GPAA1O43292 621 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 INPP5BP32019 993 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 VGLL4Q14135 290 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 SLC4A8Q2Y0W8 1093 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 ZKSCAN4Q969J2 545 aaPredicted RBP14.41□□□□□ -0.1
SSBP3-214ENST00000533209 ZIC5Q96T25 663 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 HERC5Q9UII4 1024 aaKnown RBP14.41□□□□□ -0.1
SSBP3-214ENST00000533209 SNCAIPQ9Y6H5 919 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 CDK5RAP2Q96SN8 1893 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 FOCADQ5VW36 1801 aa14.41□□□□□ -0.1
SSBP3-214ENST00000533209 A0A0D9SFI3 127 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 GSG1L2A8MUP6 293 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 HLA-DOAP06340 250 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 SDSP20132 328 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms