RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 USP48Q86UV5 1035 aa14.37□□□□□ -0.11
CHD7-211ENST00000532149 SP8Q8IXZ3 490 aa14.37□□□□□ -0.11
CHD7-211ENST00000532149 NSUN4Q96CB9 384 aaKnown RBP14.37□□□□□ -0.11
CHD7-211ENST00000532149 TFCP2L1Q9NZI6 479 aa14.37□□□□□ -0.11
CHD7-211ENST00000532149 ARPP21Q9UBL0 812 aaPredicted RBP14.37□□□□□ -0.11
CHD7-211ENST00000532149 GGA1Q9UJY5 639 aa14.37□□□□□ -0.11
CHD7-211ENST00000532149 KLF18A0A0U1RQI7 1052 aa14.36□□□□□ -0.11
CHD7-211ENST00000532149 GOLGA6L4A6NEF3 574 aa14.36□□□□□ -0.11
CHD7-211ENST00000532149 POLRMTO00411 1230 aaKnown RBP14.36□□□□□ -0.11
CHD7-211ENST00000532149 SH2B2O14492 632 aaPredicted RBP14.36□□□□□ -0.11
CHD7-211ENST00000532149 CHGBP05060 677 aa14.36□□□□□ -0.11
CHD7-211ENST00000532149 PPP4CP60510 307 aa14.36□□□□□ -0.11
CHD7-211ENST00000532149 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
CHD7-211ENST00000532149 ARMT1Q9H993 441 aa14.36□□□□□ -0.11
CHD7-211ENST00000532149 GRPEL1Q9HAV7 217 aa14.36□□□□□ -0.11
CHD7-211ENST00000532149 STK36Q9NRP7 1315 aa14.36□□□□□ -0.11
CHD7-211ENST00000532149 IRS2Q9Y4H2 1338 aa14.36□□□□□ -0.11
CHD7-211ENST00000532149 MYO5AQ9Y4I1 1855 aaKnown RBP14.35□□□□□ -0.11
CHD7-211ENST00000532149 CHD4Q14839 1912 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 ZBTB43O43298 467 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 LDHBP07195 334 aaKnown RBP14.35□□□□□ -0.11
CHD7-211ENST00000532149 IL1R1P14778 569 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 NPR1P16066 1061 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 HAND2P61296 217 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 PPARAQ07869 468 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 STK3Q13188 491 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 ZSCAN23Q3MJ62 389 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 CCDC183Q5T5S1 534 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 CAVIN1Q6NZI2 390 aaKnown RBP14.35□□□□□ -0.11
CHD7-211ENST00000532149 POTEGQ6S5H5 508 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 IQCA1Q86XH1 822 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 DZIP1Q86YF9 867 aaKnown RBP14.35□□□□□ -0.11
CHD7-211ENST00000532149 IGDCC4Q8TDY8 1250 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 FAM163AQ96GL9 167 aaPredicted RBP14.35□□□□□ -0.11
CHD7-211ENST00000532149 TCEANC2Q96MN5 208 aa14.35□□□□□ -0.11
CHD7-211ENST00000532149 GZF1Q9H116 711 aaPredicted RBP14.35□□□□□ -0.11
CHD7-211ENST00000532149 CACNA1SQ13698 1873 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 GOLGA8BA8MQT2 603 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 ORC4O43929 436 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 APBA3O96018 575 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 METAP2P50579 478 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHD7-211ENST00000532149 PDE4BQ07343 736 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 SLFNL1Q499Z3 407 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 FAM177A1Q8N128 213 aaPredicted RBP14.34□□□□□ -0.11
CHD7-211ENST00000532149 LCORLQ8N3X6 602 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 GPT2Q8TD30 523 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 LARP6Q9BRS8 491 aaKnown RBP14.34□□□□□ -0.11
CHD7-211ENST00000532149 UBAC1Q9BSL1 405 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 SLC12A7Q9Y666 1083 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 PARP3Q9Y6F1 533 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 NRXN2Q9P2S2 1712 aa14.34□□□□□ -0.11
CHD7-211ENST00000532149 IFIT3O14879 490 aaKnown RBP14.33□□□□□ -0.12
CHD7-211ENST00000532149 CAVIN2O95810 425 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 CHRM1P11229 460 aaPredicted RBP14.33□□□□□ -0.12
CHD7-211ENST00000532149 ANTXR2P58335 489 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 MECOMQ03112 1051 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 WTAPQ15007 396 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 NFXL1Q6ZNB6 911 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 TBC1D10CQ8IV04 446 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 TRIM22Q8IYM9 498 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 SPATA32Q96LK8 384 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 ZSWIM5Q9P217 1185 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 RBM27Q9P2N5 1060 aaKnown RBP14.33□□□□□ -0.12
CHD7-211ENST00000532149 ATP6V0A2Q9Y487 856 aa14.33□□□□□ -0.12
CHD7-211ENST00000532149 SNAP23O00161 211 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 XBP1P17861 261 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 TRIM29Q14134 588 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 CC2D2BQ6DHV5 1058 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 FBXO18Q8NFZ0 1043 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 C8orf76Q96K31 380 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 EYA3Q99504 573 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 MAP3K14Q99558 947 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 COA1Q9GZY4 146 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 NBPF3Q9H094 633 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 EPB41L4AQ9HCS5 686 aaPredicted RBP14.32□□□□□ -0.12
CHD7-211ENST00000532149 RBM28Q9NW13 759 aaKnown RBP14.32□□□□□ -0.12
CHD7-211ENST00000532149 ORC3Q9UBD5 711 aaPredicted RBP14.32□□□□□ -0.12
CHD7-211ENST00000532149 NAP1L2Q9ULW6 460 aaPredicted RBP14.32□□□□□ -0.12
CHD7-211ENST00000532149 TCHHQ07283 1943 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 FAM205AQ6ZU69 1335 aa14.32□□□□□ -0.12
CHD7-211ENST00000532149 TNRC6CQ9HCJ0 1690 aaKnown RBP14.31□□□□□ -0.12
CHD7-211ENST00000532149 B4E1Z4 1266 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 CTDNEP1O95476 244 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 IFNAR1P17181 557 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 IARSP41252 1262 aaKnown RBP14.31□□□□□ -0.12
CHD7-211ENST00000532149 DNM1Q05193 864 aaKnown RBP14.31□□□□□ -0.12
CHD7-211ENST00000532149 RESTQ13127 1097 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 UVSSAQ2YD98 709 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 FOXD4L5Q5VV16 416 aaPredicted RBP14.31□□□□□ -0.12
CHD7-211ENST00000532149 CDC37L1Q7L3B6 337 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 AMIGO3Q86WK7 504 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 FOXD4L4Q8WXT5 416 aaPredicted RBP14.31□□□□□ -0.12
CHD7-211ENST00000532149 MASTLQ96GX5 879 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
CHD7-211ENST00000532149 LY9Q9HBG7 655 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms