RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 FAM198AQ9UFP1 575 aa21.07■□□□□ 0.96
CTSB-222ENST00000531551 WDR90Q96KV7 1748 aa21.07■□□□□ 0.96
CTSB-222ENST00000531551 ZSCAN29Q8IWY8 852 aaPredicted RBP21.07■□□□□ 0.96
CTSB-222ENST00000531551 MAP4K1Q92918 833 aa21.07■□□□□ 0.96
CTSB-222ENST00000531551 RBM8AQ9Y5S9 174 aaKnown RBP21.07■□□□□ 0.96
CTSB-222ENST00000531551 POLR3DP05423 398 aaPredicted RBP21.06■□□□□ 0.96
CTSB-222ENST00000531551 TNNI2P48788 182 aa21.06■□□□□ 0.96
CTSB-222ENST00000531551 ZFPM1Q8IX07 1006 aa21.06■□□□□ 0.96
CTSB-222ENST00000531551 DCPSQ96C86 337 aaKnown RBP21.06■□□□□ 0.96
CTSB-222ENST00000531551 OSBPL5Q9H0X9 879 aaPredicted RBP21.06■□□□□ 0.96
CTSB-222ENST00000531551 RPAP1Q9BWH6 1393 aaPredicted RBP21.05■□□□□ 0.96
CTSB-222ENST00000531551 MINDY4BA8MYZ0 360 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 TNFAIP1Q13829 316 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 GPBP1L1Q9HC44 474 aaPredicted RBP21.05■□□□□ 0.96
CTSB-222ENST00000531551 PALD1Q9ULE6 856 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 U3KPZ7 1027 aaPredicted RBP21.05■□□□□ 0.96
CTSB-222ENST00000531551 USP17L12C9JPN9 530 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 USP17L21D6R901 530 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 GIMAP6Q6P9H5 292 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 APOBEC3FQ8IUX4 373 aaKnown RBP21.05■□□□□ 0.96
CTSB-222ENST00000531551 AMOTL1Q8IY63 956 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 USP26Q9BXU7 913 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 UPF2Q9HAU5 1272 aaKnown RBP21.05■□□□□ 0.96
CTSB-222ENST00000531551 CTNNA3Q9UI47 895 aa21.05■□□□□ 0.96
CTSB-222ENST00000531551 CYP2D7A0A087X1C5 515 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 ENTPD3O75355 529 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 POTEIP0CG38 1075 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 POTEJP0CG39 1038 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 HAND2P61296 217 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 RASA3Q14644 834 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 CTR9Q6PD62 1173 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 STK11IPQ8N1F8 1099 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 TMEM39BQ9GZU3 492 aa21.04■□□□□ 0.96
CTSB-222ENST00000531551 MKRN1Q9UHC7 482 aaKnown RBP21.04■□□□□ 0.96
CTSB-222ENST00000531551 CYP2D6P10635 497 aa21.03■□□□□ 0.96
CTSB-222ENST00000531551 YY1P25490 414 aa21.03■□□□□ 0.96
CTSB-222ENST00000531551 ALX1Q15699 326 aa21.03■□□□□ 0.96
CTSB-222ENST00000531551 FKBP1CQ5VVH2 108 aa21.03■□□□□ 0.96
CTSB-222ENST00000531551 FAM151AQ8WW52 585 aa21.03■□□□□ 0.96
CTSB-222ENST00000531551 SCN4AP35499 1836 aa21.03■□□□□ 0.96
CTSB-222ENST00000531551 ZC3H15Q8WU90 426 aaKnown RBP21.03■□□□□ 0.96
CTSB-222ENST00000531551 DEFB129Q9H1M3 183 aa21.03■□□□□ 0.96
CTSB-222ENST00000531551 ARPP21Q9UBL0 812 aaPredicted RBP21.03■□□□□ 0.96
CTSB-222ENST00000531551 CNTNAP1P78357 1384 aa21.02■□□□□ 0.96
CTSB-222ENST00000531551 ZNF213O14771 459 aa21.02■□□□□ 0.96
CTSB-222ENST00000531551 IMMTQ16891 758 aaKnown RBP21.02■□□□□ 0.96
CTSB-222ENST00000531551 FAM83AQ86UY5 434 aa21.02■□□□□ 0.96
CTSB-222ENST00000531551 SULF1Q8IWU6 871 aa21.02■□□□□ 0.96
CTSB-222ENST00000531551 DDTLA6NHG4 134 aaPredicted RBP21.01■□□□□ 0.95
CTSB-222ENST00000531551 NPM3O75607 178 aaKnown RBP21.01■□□□□ 0.95
CTSB-222ENST00000531551 MCCP23508 829 aa21.01■□□□□ 0.95
CTSB-222ENST00000531551 EVX2Q03828 476 aa21.01■□□□□ 0.95
CTSB-222ENST00000531551 SMIM22K7EJ46 135 aa21.01■□□□□ 0.95
CTSB-222ENST00000531551 HLA-DOAP06340 250 aa21.01■□□□□ 0.95
CTSB-222ENST00000531551 PLCD1P51178 756 aa21.01■□□□□ 0.95
CTSB-222ENST00000531551 PRAMEF18Q5VWM3 479 aa21.01■□□□□ 0.95
CTSB-222ENST00000531551 KRT26Q7Z3Y9 468 aa21.01■□□□□ 0.95
CTSB-222ENST00000531551 PITPNM2Q9BZ72 1349 aa21■□□□□ 0.95
CTSB-222ENST00000531551 ADM5C9JUS6 153 aa21■□□□□ 0.95
CTSB-222ENST00000531551 CTDSPL2Q05D32 466 aa21■□□□□ 0.95
CTSB-222ENST00000531551 PPARAQ07869 468 aa21■□□□□ 0.95
CTSB-222ENST00000531551 NECTIN1Q15223 517 aa21■□□□□ 0.95
CTSB-222ENST00000531551 CREB3L3Q68CJ9 461 aa21■□□□□ 0.95
CTSB-222ENST00000531551 SH3BP5LQ7L8J4 393 aa21■□□□□ 0.95
CTSB-222ENST00000531551 TTC6Q86TZ1 520 aa21■□□□□ 0.95
CTSB-222ENST00000531551 CSRNP1Q96S65 589 aa21■□□□□ 0.95
CTSB-222ENST00000531551 DHX36Q9H2U1 1008 aaKnown RBP21■□□□□ 0.95
CTSB-222ENST00000531551 ZMYM6O95789 1325 aa21■□□□□ 0.95
CTSB-222ENST00000531551 SLC27A2O14975 620 aa20.99■□□□□ 0.95
CTSB-222ENST00000531551 CYP21A2P08686 494 aa20.99■□□□□ 0.95
CTSB-222ENST00000531551 SBK1Q52WX2 424 aa20.99■□□□□ 0.95
CTSB-222ENST00000531551 C12orf60Q5U649 245 aa20.99■□□□□ 0.95
CTSB-222ENST00000531551 RNF20Q5VTR2 975 aa20.99■□□□□ 0.95
CTSB-222ENST00000531551 MAP1SQ66K74 1059 aaPredicted RBP20.99■□□□□ 0.95
CTSB-222ENST00000531551 USP48Q86UV5 1035 aa20.99■□□□□ 0.95
CTSB-222ENST00000531551 CDAN1Q8IWY9 1227 aa20.99■□□□□ 0.95
CTSB-222ENST00000531551 EPB41L2O43491 1005 aaKnown RBP20.98■□□□□ 0.95
CTSB-222ENST00000531551 DLK2Q6UY11 383 aa20.98■□□□□ 0.95
CTSB-222ENST00000531551 LDHDQ86WU2 507 aa20.98■□□□□ 0.95
CTSB-222ENST00000531551 PGAP2Q9UHJ9 254 aa20.98■□□□□ 0.95
CTSB-222ENST00000531551 HSPA4P34932 840 aa20.98■□□□□ 0.95
CTSB-222ENST00000531551 CRACR2BQ8N4Y2 399 aaPredicted RBP20.98■□□□□ 0.95
CTSB-222ENST00000531551 DYNLL2Q96FJ2 89 aa20.98■□□□□ 0.95
CTSB-222ENST00000531551 TRIM34Q9BYJ4 488 aa20.98■□□□□ 0.95
CTSB-222ENST00000531551 GLIS2Q9BZE0 524 aaPredicted RBP20.98■□□□□ 0.95
CTSB-222ENST00000531551 C22orf23Q9BZE7 217 aa20.98■□□□□ 0.95
CTSB-222ENST00000531551 ZKSCAN1P17029 563 aaPredicted RBP20.97■□□□□ 0.95
CTSB-222ENST00000531551 PI4KBQ9UBF8 816 aa20.97■□□□□ 0.95
CTSB-222ENST00000531551 ECM29Q5VYK3 1845 aa20.97■□□□□ 0.95
CTSB-222ENST00000531551 SLC3A2P08195 630 aaKnown RBP20.96■□□□□ 0.95
CTSB-222ENST00000531551 SLURP2P0DP57 97 aa20.96■□□□□ 0.95
CTSB-222ENST00000531551 CDC37L1Q7L3B6 337 aa20.96■□□□□ 0.95
CTSB-222ENST00000531551 TOMM22Q9NS69 142 aa20.96■□□□□ 0.95
CTSB-222ENST00000531551 TAF6LQ9Y6J9 622 aa20.96■□□□□ 0.95
CTSB-222ENST00000531551 NBPF12Q5TAG4 269 aaPredicted RBP20.96■□□□□ 0.95
CTSB-222ENST00000531551 MIGA2Q7L4E1 593 aa20.96■□□□□ 0.95
CTSB-222ENST00000531551 INCENPQ9NQS7 918 aa20.96■□□□□ 0.95
CTSB-222ENST00000531551 SERPINB13Q9UIV8 391 aa20.96■□□□□ 0.95
CTSB-222ENST00000531551 PPP2R3BQ9Y5P8 575 aa20.96■□□□□ 0.95
CTSB-222ENST00000531551 NAV1Q8NEY1 1877 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms