RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 VCX3BQ9H321 246 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 EHMT1Q9H9B1 1298 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 UTP11Q9Y3A2 253 aaKnown RBP8.54□□□□□ -1.04
CTNND1-223ENST00000529986 ARHGAP6O43182 974 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 KRT9P35527 623 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 PPM1FP49593 454 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-223ENST00000529986 PKP1Q13835 747 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 FYB2Q5VWT5 728 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 ANKRD13DQ6ZTN6 518 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 SNX14Q9Y5W7 946 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 ARHGEF5Q12774 1597 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 CEP170Q5SW79 1584 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 TARBP1Q13395 1621 aaKnown RBP8.54□□□□□ -1.04
CTNND1-223ENST00000529986 TRAF5O00463 557 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 PPFIA1Q13136 1202 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 TMTC2Q8N394 836 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 VCXQ9H320 206 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 CNNM2Q9H8M5 875 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 TXNDC16Q9P2K2 825 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 NFE2L3Q9Y4A8 694 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 TNNI2P48788 182 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 KRT79Q5XKE5 535 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 ANO1Q5XXA6 986 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 DTHD1Q6ZMT9 781 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 RNF10Q8N5U6 811 aaKnown RBP8.54□□□□□ -1.04
CTNND1-223ENST00000529986 GPR161Q8N6U8 529 aaKnown RBP8.54□□□□□ -1.04
CTNND1-223ENST00000529986 ANKRD42Q8N9B4 389 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 MIGA1Q8NAN2 632 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 SMC1BQ8NDV3 1235 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 BCAS4Q8TDM0 211 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 XAGE3Q8WTP9 111 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 RAD50Q92878 1312 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 SYNRGQ9UMZ2 1314 aa8.54□□□□□ -1.04
CTNND1-223ENST00000529986 ZNF202O95125 648 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 RPS6KB1P23443 525 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 GRM8O00222 908 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 SPOPO43791 374 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 NLRP12P59046 1061 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 ATP2B3Q16720 1220 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 CWF19L2Q2TBE0 894 aaKnown RBP8.53□□□□□ -1.04
CTNND1-223ENST00000529986 KRT71Q3SY84 523 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 PPP1R21Q6ZMI0 780 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 CCDC110Q8TBZ0 833 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 STAMQ92783 540 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 CRNKL1Q9BZJ0 848 aaKnown RBP8.53□□□□□ -1.04
CTNND1-223ENST00000529986 PDE11AQ9HCR9 933 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 ATP7AQ04656 1500 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 CASQ2O14958 399 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-223ENST00000529986 VAMP4O75379 141 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 E2F4Q16254 413 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 COPS6Q7L5N1 327 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 VPS52Q8N1B4 723 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 DDX41Q9UJV9 622 aaKnown RBP8.53□□□□□ -1.04
CTNND1-223ENST00000529986 FAM13AO94988 1023 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 ZWINTO95229 277 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 ATP2A2P16615 1042 aaKnown RBP8.53□□□□□ -1.04
CTNND1-223ENST00000529986 CCT5P48643 541 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 SESN3P58005 492 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 RUFY4Q6ZNE9 571 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 SDCCAG8Q86SQ7 713 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-223ENST00000529986 GBP5Q96PP8 586 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 PHF8Q9UPP1 1060 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 UHRF1BP1LA0JNW5 1464 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 RNF113AO15541 343 aaKnown RBP8.53□□□□□ -1.04
CTNND1-223ENST00000529986 MYCNP04198 464 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-223ENST00000529986 ATP5DP30049 168 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 PDE4DQ08499 809 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 TFCP2Q12800 502 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 PTPROQ16827 1216 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 WHAMMP3Q1A5X7 153 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 LRRC45Q96CN5 670 aa8.53□□□□□ -1.04
CTNND1-223ENST00000529986 RIMS2Q9UQ26 1411 aa8.52□□□□□ -1.04
CTNND1-223ENST00000529986 SLC27A2O14975 620 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 ACTN4O43707 911 aaKnown RBP8.52□□□□□ -1.05
CTNND1-223ENST00000529986 JAK2O60674 1132 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 CLTAP09496 248 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 SLC39A6Q13433 755 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 TUBB2AQ13885 445 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 INF2Q27J81 1249 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 MUM1Q2TAK8 710 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 AP1ARQ63HQ0 302 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 NOX5Q96PH1 765 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 TUBB2BQ9BVA1 445 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 FAM169AQ9Y6X4 670 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 ZFYVE9O95405 1425 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 ZPR1O75312 459 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 PAK2Q13177 524 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 GPT2Q8TD30 523 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 TESK2Q96S53 571 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 RRP15Q9Y3B9 282 aaKnown RBP8.52□□□□□ -1.05
CTNND1-223ENST00000529986 TTC41PQ6P2S7 1318 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 PPIP5K1Q6PFW1 1433 aa8.52□□□□□ -1.05
CTNND1-223ENST00000529986 PABPN1LA6NDY0 278 aaKnown RBP8.52□□□□□ -1.05
CTNND1-223ENST00000529986 BAG3O95817 575 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms