RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 PIGBQ92521 554 aa16.29■□□□□ 0.2
USP48-213ENST00000529637 SUGCTQ9HAC7 445 aa16.29■□□□□ 0.2
USP48-213ENST00000529637 TBC1D2BQ9UPU7 963 aa16.29■□□□□ 0.2
USP48-213ENST00000529637 MRFAP1Q9Y605 127 aa16.29■□□□□ 0.2
USP48-213ENST00000529637 ANKRD65E5RJM6 399 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 CASQ1P31415 396 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 DESI2Q9BSY9 194 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 AGXT2Q9BYV1 514 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 DENND2AQ9ULE3 1009 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 MARCKSP29966 332 aaPredicted RBP16.28■□□□□ 0.2
USP48-213ENST00000529637 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
USP48-213ENST00000529637 MCM6Q14566 821 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 MICU3Q86XE3 530 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 GOLGA5Q8TBA6 731 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 INTS13Q9NVM9 706 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 SLAIN2Q9P270 581 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 IRS4O14654 1257 aaPredicted RBP16.28■□□□□ 0.2
USP48-213ENST00000529637 MCAMP43121 646 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
USP48-213ENST00000529637 MROH7-TTC4A0A0A0MT08 1334 aa16.27■□□□□ 0.2
USP48-213ENST00000529637 PFKFB1P16118 471 aa16.27■□□□□ 0.2
USP48-213ENST00000529637 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.2
USP48-213ENST00000529637 COL18A1P39060 1754 aa16.27■□□□□ 0.2
USP48-213ENST00000529637 ABCC6O95255 1503 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 A0A0U1RQJ8 604 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 SPTLC2O15270 562 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.19
USP48-213ENST00000529637 TFRCP02786 760 aaKnown RBP16.27■□□□□ 0.19
USP48-213ENST00000529637 TPM1P09493 284 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 ADKP55263 362 aaKnown RBP16.27■□□□□ 0.19
USP48-213ENST00000529637 VSTM4Q8IW00 320 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 ATRIPQ8WXE1 791 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 KIFC2Q96AC6 838 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 AIFM3Q96NN9 605 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 FANCLQ9NW38 375 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 VPS18Q9P253 973 aa16.27■□□□□ 0.19
USP48-213ENST00000529637 CCP110O43303 1012 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 TOP1P11387 765 aaKnown RBP16.26■□□□□ 0.19
USP48-213ENST00000529637 PDILTQ8N807 584 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 EXOC4Q96A65 974 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 KIF28PB7ZC32 967 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 ACTN2P35609 894 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 AXDND1Q5T1B0 1012 aaPredicted RBP16.26■□□□□ 0.19
USP48-213ENST00000529637 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 AK7Q96M32 723 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 B4E1Z4 1266 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 PNOCQ13519 176 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
USP48-213ENST00000529637 MB21D2Q8IYB1 491 aaPredicted RBP16.26■□□□□ 0.19
USP48-213ENST00000529637 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.26■□□□□ 0.19
USP48-213ENST00000529637 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 MPHOSPH8Q99549 860 aa16.26■□□□□ 0.19
USP48-213ENST00000529637 TEX13AQ9BXU3 409 aaPredicted RBP16.26■□□□□ 0.19
USP48-213ENST00000529637 FOXP2O15409 715 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 METAP2P50579 478 aaKnown RBP eCLIP16.25■□□□□ 0.19
USP48-213ENST00000529637 ANTXR2P58335 489 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 RRP12Q5JTH9 1297 aaKnown RBP16.25■□□□□ 0.19
USP48-213ENST00000529637 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
USP48-213ENST00000529637 GIGYF2Q6Y7W6 1299 aaKnown RBP16.25■□□□□ 0.19
USP48-213ENST00000529637 TTLL11Q8NHH1 800 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 PHKBQ93100 1093 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 MYL10Q9BUA6 226 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 EFCC1Q9HA90 598 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 DCCP43146 1447 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 SNAP23O00161 211 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 PHKA1P46020 1223 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 MTF1Q14872 753 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 MYSM1Q5VVJ2 828 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 NLRP10Q86W26 655 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 MAP3K15Q6ZN16 1313 aa16.25■□□□□ 0.19
USP48-213ENST00000529637 MAP2K7O14733 419 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 IKBKBO14920 756 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 KCNG4Q8TDN1 519 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 RABGGTAQ92696 567 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 ALG1Q9BT22 464 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 PUF60Q9UHX1 559 aaKnown RBP16.24■□□□□ 0.19
USP48-213ENST00000529637 CDC27P30260 824 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 CTSWP56202 376 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 BAG1Q99933 345 aaPredicted RBP16.24■□□□□ 0.19
USP48-213ENST00000529637 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
USP48-213ENST00000529637 INCENPQ9NQS7 918 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 CWC15Q9P013 229 aaKnown RBP16.24■□□□□ 0.19
USP48-213ENST00000529637 HPS5Q9UPZ3 1129 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 ZBTB1Q9Y2K1 713 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 ZNF532Q9HCE3 1301 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 ARHGAP6O43182 974 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 PDE4BQ07343 736 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 MRPL44Q9H9J2 332 aaKnown RBP16.24■□□□□ 0.19
USP48-213ENST00000529637 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
USP48-213ENST00000529637 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
USP48-213ENST00000529637 TXLNAP40222 546 aa16.23■□□□□ 0.19
USP48-213ENST00000529637 CCDC82Q8N4S0 544 aa16.23■□□□□ 0.19
USP48-213ENST00000529637 PNKPQ96T60 521 aa16.23■□□□□ 0.19
USP48-213ENST00000529637 PLEKHA4Q9H4M7 779 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms