RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	FAM227B	Q96M60	508 aa		6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	STRBP	Q96SI9	672 aa	Known RBP	6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	RIOK1	Q9BRS2	568 aa	Known RBP	6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	MXD3	Q9BW11	206 aa		6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	IDI2	Q9BXS1	227 aa		6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	PUS7L	Q9H0K6	701 aa	Known RBP	6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	RNF41	Q9H4P4	317 aa	Predicted RBP	6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	ARMT1	Q9H993	441 aa		6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	VEZT	Q9HBM0	779 aa		6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	MCM9	Q9NXL9	1143 aa		6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	ZNF646	O15015	1829 aa	Predicted RBP	6.25	□□□□□ -1.41
PUM1-216	ENST00000525997	ECM29	Q5VYK3	1845 aa		6.25	□□□□□ -1.41
PUM1-216	ENST00000525997		M0R2C6	588 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	ZNF213	O14771	459 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	POLR3D	P05423	398 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	HSPD1	P10809	573 aa	Known RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	HSPA6	P17066	643 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	EPS15	P42566	896 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	TRDN	Q13061	729 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	GRIK5	Q16478	980 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	SUPT20HL1	Q3ZLR7	823 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	PPP4R3B	Q5MIZ7	849 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	DCAF15	Q66K64	600 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	CDC42EP5	Q6NZY7	148 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	LDHD	Q86WU2	507 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	IFNL3	Q8IZI9	196 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	LCORL	Q8N3X6	602 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	TGFBRAP1	Q8WUH2	860 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	ZBED3	Q96IU2	234 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	PRMT6	Q96LA8	375 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	OSBPL5	Q9H0X9	879 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	TAF1D	Q9H5J8	278 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	TDRD3	Q9H7E2	651 aa	Known RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	GPBP1L1	Q9HC44	474 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	ZNF70	Q9UC06	446 aa	Predicted RBP	6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	SWAP70	Q9UH65	585 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	FLT1	P17948	1338 aa		6.24	□□□□□ -1.41
PUM1-216	ENST00000525997	ATRNL1	Q5VV63	1379 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	GSG1L2	A8MUP6	293 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	HMGB1	P09429	215 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	PSMA5	P28066	241 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	RHBDL3	P58872	404 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	ANAPC15	P60006	121 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	DYNLL1	P63167	89 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	PDE4B	Q07343	736 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	PICALM	Q13492	652 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	C8orf34	Q49A92	452 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	SBK1	Q52WX2	424 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	EAPP	Q56P03	285 aa	Predicted RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	CHRDL2	Q6WN34	429 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	CDC37L1	Q7L3B6	337 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	SAMD7	Q7Z3H4	446 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	RALYL	Q86SE5	291 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	ADGRA1	Q86SQ6	560 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	FOXP4	Q8IVH2	680 aa	Predicted RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	TRPM4	Q8TD43	1214 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	ZNF384	Q8TF68	577 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	FAM151A	Q8WW52	585 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	MAP4K1	Q92918	833 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	EHD4	Q9H223	541 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	CNNM2	Q9H8M5	875 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	DCP1A	Q9NPI6	582 aa	Predicted RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	GINM1	Q9NU53	330 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	GGA3	Q9NZ52	723 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	PI4KB	Q9UBF8	816 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	HERC5	Q9UII4	1024 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	CLEC11A	Q9Y240	323 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	SSUH2	Q9Y2M2	353 aa		6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	MYO5A	Q9Y4I1	1855 aa	Known RBP	6.23	□□□□□ -1.41
PUM1-216	ENST00000525997	NAV1	Q8NEY1	1877 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	CLRN2	A0PK11	232 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	TCP10L2	B9ZVM9	353 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	WDHD1	O75717	1129 aa	Predicted RBP	6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	PPARA	Q07869	468 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	NBPF9	Q3BBW0	867 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	CCDC178	Q5BJE1	867 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	ANGEL2	Q5VTE6	544 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	CCDC129	Q6ZRS4	1044 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	KRT26	Q7Z3Y9	468 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	MAPKAPK5	Q8IW41	473 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	SDR42E1	Q8WUS8	393 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	SEC62	Q99442	399 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	BACH2	Q9BYV9	841 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	KRT23	Q9C075	422 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	LSG1	Q9H089	658 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	DEFB129	Q9H1M3	183 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	RRAGC	Q9HB90	399 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	SERPINB13	Q9UIV8	391 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	ANAPC4	Q9UJX5	808 aa		6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	RBM8A	Q9Y5S9	174 aa	Known RBP	6.22	□□□□□ -1.41
PUM1-216	ENST00000525997	ROBO3	Q96MS0	1386 aa		6.21	□□□□□ -1.41
PUM1-216	ENST00000525997	FOCAD	Q5VW36	1801 aa		6.21	□□□□□ -1.42
PUM1-216	ENST00000525997	UNCX	A6NJT0	531 aa		6.21	□□□□□ -1.42
PUM1-216	ENST00000525997	MINDY4B	A8MYZ0	360 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms