RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 FBXO46Q6PJ61 603 aaPredicted RBP13.36□□□□□ -0.27
PVT1-216ENST00000523068 TBC1D9Q6ZT07 1266 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
PVT1-216ENST00000523068 BRI3BPQ8WY22 251 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 ERO1AQ96HE7 468 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 ZNF512BQ96KM6 892 aaPredicted RBP13.36□□□□□ -0.27
PVT1-216ENST00000523068 DBNDD2Q9BQY9 259 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 ZFYVE28Q9HCC9 887 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 ZCCHC17Q9NP64 241 aaKnown RBP13.36□□□□□ -0.27
PVT1-216ENST00000523068 DDX19BQ9UMR2 479 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 DOCK1Q14185 1865 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 CDK5RAP2Q96SN8 1893 aa13.36□□□□□ -0.27
PVT1-216ENST00000523068 FOCADQ5VW36 1801 aa13.35□□□□□ -0.27
PVT1-216ENST00000523068 IRF6O14896 467 aa13.35□□□□□ -0.27
PVT1-216ENST00000523068 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
PVT1-216ENST00000523068 INPP5BP32019 993 aa13.35□□□□□ -0.27
PVT1-216ENST00000523068 RGS19P49795 217 aa13.35□□□□□ -0.27
PVT1-216ENST00000523068 PICALMQ13492 652 aa13.35□□□□□ -0.27
PVT1-216ENST00000523068 TAF1CQ15572 869 aaPredicted RBP13.35□□□□□ -0.27
PVT1-216ENST00000523068 NOL9Q5SY16 702 aaKnown RBP13.35□□□□□ -0.27
PVT1-216ENST00000523068 ZFPM1Q8IX07 1006 aa13.35□□□□□ -0.27
PVT1-216ENST00000523068 RCAN3Q9UKA8 241 aa13.35□□□□□ -0.27
PVT1-216ENST00000523068 HPS5Q9UPZ3 1129 aa13.35□□□□□ -0.27
PVT1-216ENST00000523068 RHBDL3P58872 404 aa13.34□□□□□ -0.27
PVT1-216ENST00000523068 SP3Q02447 781 aa13.34□□□□□ -0.27
PVT1-216ENST00000523068 MLLT1Q03111 559 aaPredicted RBP13.34□□□□□ -0.27
PVT1-216ENST00000523068 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
PVT1-216ENST00000523068 ZNF384Q8TF68 577 aa13.34□□□□□ -0.27
PVT1-216ENST00000523068 COL2A1P02458 1487 aaPredicted RBP13.34□□□□□ -0.27
PVT1-216ENST00000523068 ATAD5Q96QE3 1844 aa13.34□□□□□ -0.27
PVT1-216ENST00000523068 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.27
PVT1-216ENST00000523068 HMMRO75330 724 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 BAG3O95817 575 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 PLCG2P16885 1265 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 MAP3K10Q02779 954 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 ARHGEF6Q15052 776 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 NAA16Q6N069 864 aaPredicted RBP13.33□□□□□ -0.28
PVT1-216ENST00000523068 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.33□□□□□ -0.28
PVT1-216ENST00000523068 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
PVT1-216ENST00000523068 DDX4Q9NQI0 724 aaKnown RBP13.33□□□□□ -0.28
PVT1-216ENST00000523068 PICK1Q9NRD5 415 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 DBNLQ9UJU6 430 aaKnown RBP13.33□□□□□ -0.28
PVT1-216ENST00000523068 TRIM17Q9Y577 477 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 PTPRFP10586 1907 aa13.33□□□□□ -0.28
PVT1-216ENST00000523068 PHIPQ8WWQ0 1821 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 DDTLA6NHG4 134 aaPredicted RBP13.32□□□□□ -0.28
PVT1-216ENST00000523068 PHF20L1A8MW92 1017 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 BTBD19C9JJ37 291 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 CYP2E1P05181 493 aaPredicted RBP13.32□□□□□ -0.28
PVT1-216ENST00000523068 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 OTOP1Q7RTM1 612 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 TEX11Q8IYF3 940 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 CD99L2Q8TCZ2 262 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 EAF2Q96CJ1 260 aaPredicted RBP13.32□□□□□ -0.28
PVT1-216ENST00000523068 KCNH4Q9UQ05 1017 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 EXOC6BQ9Y2D4 811 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
PVT1-216ENST00000523068 CXCL11O14625 94 aa13.31□□□□□ -0.28
PVT1-216ENST00000523068 TBC1D12O60347 775 aa13.31□□□□□ -0.28
PVT1-216ENST00000523068 TLR2O60603 784 aa13.31□□□□□ -0.28
PVT1-216ENST00000523068 CTNND1O60716 968 aaKnown RBP13.31□□□□□ -0.28
PVT1-216ENST00000523068 ZAP70P43403 619 aa13.31□□□□□ -0.28
PVT1-216ENST00000523068 ANKRD23Q86SG2 305 aa13.31□□□□□ -0.28
PVT1-216ENST00000523068 AACSQ86V21 672 aa13.31□□□□□ -0.28
PVT1-216ENST00000523068 OSBPL5Q9H0X9 879 aaPredicted RBP13.31□□□□□ -0.28
PVT1-216ENST00000523068 EFCC1Q9HA90 598 aa13.31□□□□□ -0.28
PVT1-216ENST00000523068 ZBTB40Q9NUA8 1239 aa13.31□□□□□ -0.28
PVT1-216ENST00000523068 PPP4CP60510 307 aa13.3□□□□□ -0.28
PVT1-216ENST00000523068 PDE3AQ14432 1141 aa13.3□□□□□ -0.28
PVT1-216ENST00000523068 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
PVT1-216ENST00000523068 FASTKD5Q7L8L6 764 aaKnown RBP13.3□□□□□ -0.28
PVT1-216ENST00000523068 CERS3Q8IU89 383 aa13.3□□□□□ -0.28
PVT1-216ENST00000523068 RHPN1Q8TCX5 695 aa13.3□□□□□ -0.28
PVT1-216ENST00000523068 KIF1BPQ96EK5 621 aa13.3□□□□□ -0.28
PVT1-216ENST00000523068 DHX36Q9H2U1 1008 aaKnown RBP13.3□□□□□ -0.28
PVT1-216ENST00000523068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.3□□□□□ -0.283e-9■■■■□ 25.5
PVT1-216ENST00000523068 AATFQ9NY61 560 aaKnown RBP eCLIP13.3□□□□□ -0.28
PVT1-216ENST00000523068 TLR7Q9NYK1 1049 aaKnown RBP13.3□□□□□ -0.28
PVT1-216ENST00000523068 ZHX2Q9Y6X8 837 aa13.3□□□□□ -0.28
PVT1-216ENST00000523068 MYH1P12882 1939 aa13.3□□□□□ -0.28
PVT1-216ENST00000523068 RAB11FIP3O75154 756 aa13.29□□□□□ -0.28
PVT1-216ENST00000523068 PTPRAP18433 802 aa13.29□□□□□ -0.28
PVT1-216ENST00000523068 SOX10P56693 466 aa13.29□□□□□ -0.28
PVT1-216ENST00000523068 KIF22Q14807 665 aa13.29□□□□□ -0.28
PVT1-216ENST00000523068 CLASRPQ8N2M8 674 aaKnown RBP13.29□□□□□ -0.28
PVT1-216ENST00000523068 SH3RF3Q8TEJ3 882 aaPredicted RBP13.29□□□□□ -0.28
PVT1-216ENST00000523068 HERC5Q9UII4 1024 aaKnown RBP13.29□□□□□ -0.28
PVT1-216ENST00000523068 RBBP6Q7Z6E9 1792 aaKnown RBP13.28□□□□□ -0.28
PVT1-216ENST00000523068 SIPA1L1O43166 1804 aa13.28□□□□□ -0.28
PVT1-216ENST00000523068 PDHXO00330 501 aa13.28□□□□□ -0.28
PVT1-216ENST00000523068 IDH1O75874 414 aaKnown RBP13.28□□□□□ -0.28
PVT1-216ENST00000523068 KCNA4P22459 653 aa13.28□□□□□ -0.28
PVT1-216ENST00000523068 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
PVT1-216ENST00000523068 TTF1Q15361 905 aaPredicted RBP13.28□□□□□ -0.28
PVT1-216ENST00000523068 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
PVT1-216ENST00000523068 PIH1D3Q9NQM4 214 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms