RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 MYH13Q9UKX3 1938 aa18.46■□□□□ 0.55
PRKDC-204ENST00000521331 MYPNQ86TC9 1320 aa18.46■□□□□ 0.55
PRKDC-204ENST00000521331 RFX7Q2KHR2 1363 aa18.45■□□□□ 0.54
PRKDC-204ENST00000521331 A0A0G2JLL6 359 aaPredicted RBP18.45■□□□□ 0.54
PRKDC-204ENST00000521331 BCRP11274 1271 aa18.45■□□□□ 0.54
PRKDC-204ENST00000521331 PTPRAP18433 802 aa18.45■□□□□ 0.54
PRKDC-204ENST00000521331 MAP3K10Q02779 954 aa18.45■□□□□ 0.54
PRKDC-204ENST00000521331 PRRT2Q7Z6L0 340 aaPredicted RBP18.45■□□□□ 0.54
PRKDC-204ENST00000521331 MEIS3Q99687 375 aa18.45■□□□□ 0.54
PRKDC-204ENST00000521331 ABCF2Q9UG63 623 aa18.45■□□□□ 0.54
PRKDC-204ENST00000521331 SLC45A1Q9Y2W3 748 aa18.45■□□□□ 0.54
PRKDC-204ENST00000521331 GNAI3P08754 354 aa18.44■□□□□ 0.54
PRKDC-204ENST00000521331 CYP2C8P10632 490 aa18.44■□□□□ 0.54
PRKDC-204ENST00000521331 MVPQ14764 893 aaKnown RBP18.44■□□□□ 0.54
PRKDC-204ENST00000521331 MTFR1Q15390 333 aa18.44■□□□□ 0.54
PRKDC-204ENST00000521331 AFG3L2Q9Y4W6 797 aa18.44■□□□□ 0.54
PRKDC-204ENST00000521331 A0A1B0GUL7 405 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 CTNND1O60716 968 aaKnown RBP18.43■□□□□ 0.54
PRKDC-204ENST00000521331 BTDP43251 543 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 TIMM10P62072 90 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 UBXN2AP68543 259 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 SH3BP5LQ7L8J4 393 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 ARHGAP45Q92619 1136 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 SHISA4Q96DD7 197 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 ZSWIM8A7E2V4 1837 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 MROH7-TTC4A0A0A0MT08 1334 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 CEP290O15078 2479 aa18.43■□□□□ 0.54
PRKDC-204ENST00000521331 DDTLA6NHG4 134 aaPredicted RBP18.42■□□□□ 0.54
PRKDC-204ENST00000521331 SRGAP3O43295 1099 aa18.42■□□□□ 0.54
PRKDC-204ENST00000521331 GJB1P08034 283 aa18.42■□□□□ 0.54
PRKDC-204ENST00000521331 FXR1P51114 621 aaKnown RBP eCLIP18.42■□□□□ 0.541e-6■■■□□ 16
PRKDC-204ENST00000521331 PRKCZQ05513 592 aa18.42■□□□□ 0.54
PRKDC-204ENST00000521331 GADL1Q6ZQY3 521 aa18.42■□□□□ 0.54
PRKDC-204ENST00000521331 SLAIN1Q8ND83 568 aa18.42■□□□□ 0.54
PRKDC-204ENST00000521331 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
PRKDC-204ENST00000521331 BIN2Q9UBW5 565 aaPredicted RBP18.42■□□□□ 0.54
PRKDC-204ENST00000521331 COLQQ9Y215 455 aaPredicted RBP18.42■□□□□ 0.54
PRKDC-204ENST00000521331 H0YGN5 161 aa18.41■□□□□ 0.54
PRKDC-204ENST00000521331 NPM3O75607 178 aaKnown RBP18.41■□□□□ 0.54
PRKDC-204ENST00000521331 MAP4K4O95819 1239 aaPredicted RBP18.41■□□□□ 0.54
PRKDC-204ENST00000521331 CCL5P13501 91 aa18.41■□□□□ 0.54
PRKDC-204ENST00000521331 GJA8P48165 433 aa18.41■□□□□ 0.54
PRKDC-204ENST00000521331 RARSP54136 660 aaKnown RBP18.41■□□□□ 0.54
PRKDC-204ENST00000521331 TFCP2Q12800 502 aa18.41■□□□□ 0.54
PRKDC-204ENST00000521331 PICALMQ13492 652 aa18.41■□□□□ 0.54
PRKDC-204ENST00000521331 MTX1Q13505 466 aa18.41■□□□□ 0.54
PRKDC-204ENST00000521331 ERICH6Q7L0X2 663 aa18.41■□□□□ 0.54
PRKDC-204ENST00000521331 DDX4Q9NQI0 724 aaKnown RBP18.41■□□□□ 0.54
PRKDC-204ENST00000521331 GPR75-ASB3A0A0A6YYF3 556 aa18.4■□□□□ 0.54
PRKDC-204ENST00000521331 TBC1D12O60347 775 aa18.4■□□□□ 0.54
PRKDC-204ENST00000521331 MECOMQ03112 1051 aa18.4■□□□□ 0.54
PRKDC-204ENST00000521331 RNF208Q9H0X6 261 aa18.4■□□□□ 0.54
PRKDC-204ENST00000521331 AK9Q5TCS8 1911 aa18.4■□□□□ 0.54
PRKDC-204ENST00000521331 LDHCP07864 332 aa18.39■□□□□ 0.53
PRKDC-204ENST00000521331 RHBDL3P58872 404 aa18.39■□□□□ 0.53
PRKDC-204ENST00000521331 GSTO1P78417 241 aa18.39■□□□□ 0.53
PRKDC-204ENST00000521331 SMCR8Q8TEV9 937 aaPredicted RBP18.39■□□□□ 0.53
PRKDC-204ENST00000521331 DPF3Q92784 378 aa18.39■□□□□ 0.53
PRKDC-204ENST00000521331 HTATIP2Q9BUP3 242 aa18.39■□□□□ 0.53
PRKDC-204ENST00000521331 TRIM75PA6NK02 468 aa18.38■□□□□ 0.53
PRKDC-204ENST00000521331 CAPN2P17655 700 aa18.38■□□□□ 0.53
PRKDC-204ENST00000521331 GORABQ5T7V8 394 aa18.38■□□□□ 0.53
PRKDC-204ENST00000521331 UBE2Q1Q7Z7E8 422 aa18.38■□□□□ 0.53
PRKDC-204ENST00000521331 NEUROD6Q96NK8 337 aa18.38■□□□□ 0.53
PRKDC-204ENST00000521331 GABRQQ9UN88 632 aa18.38■□□□□ 0.53
PRKDC-204ENST00000521331 AGTPBP1Q9UPW5 1226 aa18.38■□□□□ 0.53
PRKDC-204ENST00000521331 DOCK2Q92608 1830 aa18.37■□□□□ 0.53
PRKDC-204ENST00000521331 ADCY3O60266 1144 aa18.37■□□□□ 0.53
PRKDC-204ENST00000521331 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
PRKDC-204ENST00000521331 PXYLP1Q8TE99 480 aa18.37■□□□□ 0.53
PRKDC-204ENST00000521331 OSBPL5Q9H0X9 879 aaPredicted RBP18.37■□□□□ 0.53
PRKDC-204ENST00000521331 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.37■□□□□ 0.53
PRKDC-204ENST00000521331 HMG20BQ9P0W2 317 aa18.37■□□□□ 0.53
PRKDC-204ENST00000521331 PNMA3Q9UL41 463 aa18.37■□□□□ 0.53
PRKDC-204ENST00000521331 MYH2Q9UKX2 1941 aa18.37■□□□□ 0.53
PRKDC-204ENST00000521331 TNPO2O14787 897 aaKnown RBP18.36■□□□□ 0.53
PRKDC-204ENST00000521331 IPO8O15397 1037 aaKnown RBP18.36■□□□□ 0.53
PRKDC-204ENST00000521331 COL2A1P02458 1487 aaPredicted RBP18.36■□□□□ 0.53
PRKDC-204ENST00000521331 FLT3LGP49771 235 aa18.36■□□□□ 0.53
PRKDC-204ENST00000521331 IRF5Q13568 498 aa18.36■□□□□ 0.53
PRKDC-204ENST00000521331 PROCA1Q8NCQ7 364 aaPredicted RBP18.36■□□□□ 0.53
PRKDC-204ENST00000521331 ZNF384Q8TF68 577 aa18.36■□□□□ 0.53
PRKDC-204ENST00000521331 U2AF1L4Q8WU68 220 aaKnown RBP18.36■□□□□ 0.53
PRKDC-204ENST00000521331 NSUN4Q96CB9 384 aaKnown RBP18.36■□□□□ 0.53
PRKDC-204ENST00000521331 TBC1D2Q9BYX2 928 aa18.36■□□□□ 0.53
PRKDC-204ENST00000521331 TRIOBPQ9H2D6 2365 aa18.35■□□□□ 0.53
PRKDC-204ENST00000521331 GNAI2P04899 355 aa18.35■□□□□ 0.53
PRKDC-204ENST00000521331 SLURP2P0DP57 97 aa18.35■□□□□ 0.53
PRKDC-204ENST00000521331 ARID4AP29374 1257 aaPredicted RBP18.35■□□□□ 0.53
PRKDC-204ENST00000521331 COA7Q96BR5 231 aa18.35■□□□□ 0.53
PRKDC-204ENST00000521331 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
PRKDC-204ENST00000521331 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
PRKDC-204ENST00000521331 FARP2O94887 1054 aaPredicted RBP18.34■□□□□ 0.53
PRKDC-204ENST00000521331 SGPL1O95470 568 aa18.34■□□□□ 0.53
PRKDC-204ENST00000521331 UQCRFS1P1P0C7P4 283 aa18.34■□□□□ 0.53
PRKDC-204ENST00000521331 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.538e-8■■□□□ 13.9
PRKDC-204ENST00000521331 FAM110CQ1W6H9 321 aa18.34■□□□□ 0.53
PRKDC-204ENST00000521331 CHRDL2Q6WN34 429 aa18.34■□□□□ 0.53
PRKDC-204ENST00000521331 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.34■□□□□ 0.53
PRKDC-204ENST00000521331 NR2E3Q9Y5X4 410 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms