RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 MAP3K11Q16584 847 aa27.25■■□□□ 1.95
SKP1-206ENST00000519321 ZSCAN29Q8IWY8 852 aaPredicted RBP27.25■■□□□ 1.95
SKP1-206ENST00000519321 TGFBRAP1Q8WUH2 860 aa27.25■■□□□ 1.95
SKP1-206ENST00000519321 CRNKL1Q9BZJ0 848 aaKnown RBP27.25■■□□□ 1.95
SKP1-206ENST00000519321 OSBPL5Q9H0X9 879 aaPredicted RBP27.25■■□□□ 1.95
SKP1-206ENST00000519321 SSC5DA1L4H1 1573 aa27.25■■□□□ 1.95
SKP1-206ENST00000519321 UNCXA6NJT0 531 aa27.24■■□□□ 1.95
SKP1-206ENST00000519321 TRIM6-TRIM34B2RNG4 842 aa27.24■■□□□ 1.95
SKP1-206ENST00000519321 APPBP2Q92624 585 aa27.24■■□□□ 1.95
SKP1-206ENST00000519321 PPP4R2Q9NY27 417 aa27.24■■□□□ 1.95
SKP1-206ENST00000519321 ANGEL1Q9UNK9 670 aaKnown RBP27.24■■□□□ 1.95
SKP1-206ENST00000519321 ATRNL1Q5VV63 1379 aa27.23■■□□□ 1.95
SKP1-206ENST00000519321 USP5P45974 858 aa27.23■■□□□ 1.95
SKP1-206ENST00000519321 PRKG1Q13976 671 aa27.23■■□□□ 1.95
SKP1-206ENST00000519321 CDAN1Q8IWY9 1227 aa27.23■■□□□ 1.95
SKP1-206ENST00000519321 ZFPM1Q8IX07 1006 aa27.23■■□□□ 1.95
SKP1-206ENST00000519321 AIDAQ96BJ3 306 aa27.23■■□□□ 1.95
SKP1-206ENST00000519321 CSRNP1Q96S65 589 aa27.23■■□□□ 1.95
SKP1-206ENST00000519321 DHX36Q9H2U1 1008 aaKnown RBP27.23■■□□□ 1.95
SKP1-206ENST00000519321 FLT1P17948 1338 aa27.22■■□□□ 1.95
SKP1-206ENST00000519321 AK9Q5TCS8 1911 aa27.22■■□□□ 1.95
SKP1-206ENST00000519321 ECE1P42892 770 aa27.22■■□□□ 1.95
SKP1-206ENST00000519321 FOCADQ5VW36 1801 aa27.22■■□□□ 1.95
SKP1-206ENST00000519321 USP2O75604 605 aaPredicted RBP27.21■■□□□ 1.95
SKP1-206ENST00000519321 MBD4O95243 580 aa27.21■■□□□ 1.95
SKP1-206ENST00000519321 PAXIP1Q6ZW49 1069 aaPredicted RBP27.21■■□□□ 1.95
SKP1-206ENST00000519321 MAPKAPK5Q8IW41 473 aa27.21■■□□□ 1.95
SKP1-206ENST00000519321 KLRG1Q96E93 195 aa27.21■■□□□ 1.95
SKP1-206ENST00000519321 MKRN1Q9UHC7 482 aaKnown RBP27.21■■□□□ 1.95
SKP1-206ENST00000519321 UBE2Q2LH0YL09 131 aa27.2■■□□□ 1.94
SKP1-206ENST00000519321 RGMBQ6NW40 437 aa27.2■■□□□ 1.94
SKP1-206ENST00000519321 LCORLQ8N3X6 602 aa27.2■■□□□ 1.94
SKP1-206ENST00000519321 DNAJC5GQ8N7S2 189 aa27.2■■□□□ 1.94
SKP1-206ENST00000519321 RILPL2Q969X0 211 aa27.2■■□□□ 1.94
SKP1-206ENST00000519321 CDK5RAP2Q96SN8 1893 aa27.2■■□□□ 1.94
SKP1-206ENST00000519321 ZNF341Q9BYN7 854 aa27.2■■□□□ 1.94
SKP1-206ENST00000519321 PUS7LQ9H0K6 701 aaKnown RBP27.2■■□□□ 1.94
SKP1-206ENST00000519321 ARMT1Q9H993 441 aa27.2■■□□□ 1.94
SKP1-206ENST00000519321 DDTLA6NHG4 134 aaPredicted RBP27.19■■□□□ 1.94
SKP1-206ENST00000519321 SLFNL1Q499Z3 407 aa27.19■■□□□ 1.94
SKP1-206ENST00000519321 LDLRAD1Q5T700 205 aa27.19■■□□□ 1.94
SKP1-206ENST00000519321 MOB2Q70IA6 237 aa27.19■■□□□ 1.94
SKP1-206ENST00000519321 SH3BP5LQ7L8J4 393 aa27.19■■□□□ 1.94
SKP1-206ENST00000519321 CCDC102AQ96A19 550 aa27.19■■□□□ 1.94
SKP1-206ENST00000519321 CHGBP05060 677 aa27.18■■□□□ 1.94
SKP1-206ENST00000519321 TTC22Q5TAA0 569 aa27.18■■□□□ 1.94
SKP1-206ENST00000519321 ANKRD13AQ8IZ07 590 aa27.18■■□□□ 1.94
SKP1-206ENST00000519321 ZNF157P51786 506 aaPredicted RBP27.17■■□□□ 1.94
SKP1-206ENST00000519321 ZMYM1Q5SVZ6 1142 aa27.17■■□□□ 1.94
SKP1-206ENST00000519321 MIGA2Q7L4E1 593 aa27.17■■□□□ 1.94
SKP1-206ENST00000519321 OSBP2Q969R2 916 aa27.17■■□□□ 1.94
SKP1-206ENST00000519321 DDRGK1Q96HY6 314 aa27.17■■□□□ 1.94
SKP1-206ENST00000519321 ATP8A2Q9NTI2 1148 aa27.17■■□□□ 1.94
SKP1-206ENST00000519321 PI4KBQ9UBF8 816 aa27.17■■□□□ 1.94
SKP1-206ENST00000519321 TBC1D12O60347 775 aa27.16■■□□□ 1.94
SKP1-206ENST00000519321 HLA-DOAP06340 250 aa27.16■■□□□ 1.94
SKP1-206ENST00000519321 MAP3K9P80192 1104 aa27.16■■□□□ 1.94
SKP1-206ENST00000519321 MAP3K10Q02779 954 aa27.16■■□□□ 1.94
SKP1-206ENST00000519321 CAPNS2Q96L46 248 aa27.16■■□□□ 1.94
SKP1-206ENST00000519321 FZD1Q9UP38 647 aa27.16■■□□□ 1.94
SKP1-206ENST00000519321 GNAT2P19087 354 aa27.15■■□□□ 1.94
SKP1-206ENST00000519321 CYP4F22Q6NT55 531 aa27.15■■□□□ 1.94
SKP1-206ENST00000519321 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.15■■□□□ 1.94
SKP1-206ENST00000519321 HERC5Q9UII4 1024 aaKnown RBP27.15■■□□□ 1.94
SKP1-206ENST00000519321 WDR33Q9C0J8 1336 aaKnown RBP27.15■■□□□ 1.94
SKP1-206ENST00000519321 HIP1O00291 1037 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 GPAA1O43292 621 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 VEGFBP49765 207 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 TTC6Q86TZ1 520 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 FOXP4Q8IVH2 680 aaPredicted RBP27.14■■□□□ 1.94
SKP1-206ENST00000519321 SDR42E1Q8WUS8 393 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 SLC10A4Q96EP9 437 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 WRNIP1Q96S55 665 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 STRBPQ96SI9 672 aaKnown RBP27.14■■□□□ 1.94
SKP1-206ENST00000519321 DCP1AQ9NPI6 582 aaPredicted RBP27.14■■□□□ 1.94
SKP1-206ENST00000519321 HELLSQ9NRZ9 838 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 PALD1Q9ULE6 856 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 CSADQ9Y600 493 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 SLC4A4Q9Y6R1 1079 aa27.14■■□□□ 1.94
SKP1-206ENST00000519321 SAP30BPQ9UHR5 308 aaKnown RBP27.13■■□□□ 1.93
SKP1-206ENST00000519321 ZNF112Q9UJU3 913 aa27.13■■□□□ 1.93
SKP1-206ENST00000519321 MYH1P12882 1939 aa27.13■■□□□ 1.93
SKP1-206ENST00000519321 NOGQ13253 232 aa27.12■■□□□ 1.93
SKP1-206ENST00000519321 AMOTL1Q8IY63 956 aa27.12■■□□□ 1.93
SKP1-206ENST00000519321 TRIM34Q9BYJ4 488 aa27.12■■□□□ 1.93
SKP1-206ENST00000519321 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.12■■□□□ 1.932e-6■■■□□ 18.4
SKP1-206ENST00000519321 MCM9Q9NXL9 1143 aa27.12■■□□□ 1.93
SKP1-206ENST00000519321 NAV1Q8NEY1 1877 aa27.12■■□□□ 1.93
SKP1-206ENST00000519321 M0R2C6 588 aa27.11■■□□□ 1.93
SKP1-206ENST00000519321 POLR3DP05423 398 aaPredicted RBP27.11■■□□□ 1.93
SKP1-206ENST00000519321 SLC10A3P09131 477 aa27.11■■□□□ 1.93
SKP1-206ENST00000519321 GSPT1P15170 499 aaKnown RBP27.11■■□□□ 1.93
SKP1-206ENST00000519321 SDSP20132 328 aa27.11■■□□□ 1.93
SKP1-206ENST00000519321 GRM1Q13255 1194 aa27.11■■□□□ 1.93
SKP1-206ENST00000519321 GIMAP6Q6P9H5 292 aa27.11■■□□□ 1.93
SKP1-206ENST00000519321 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.11■■□□□ 1.93
SKP1-206ENST00000519321 RASAL3Q86YV0 1011 aa27.11■■□□□ 1.93
SKP1-206ENST00000519321 CRACR2BQ8N4Y2 399 aaPredicted RBP27.11■■□□□ 1.93
SKP1-206ENST00000519321 PRKAB2O43741 272 aa27.1■■□□□ 1.93
SKP1-206ENST00000519321 MAP2K2P36507 400 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms