RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 FRAT2O75474 233 aaPredicted RBP12.48□□□□□ -0.41
SH2D4A-202ENST00000518040 GPAT2Q6NUI2 795 aa12.48□□□□□ -0.41
SH2D4A-202ENST00000518040 HHIPL2Q6UWX4 724 aa12.48□□□□□ -0.41
SH2D4A-202ENST00000518040 FAM151AQ8WW52 585 aa12.48□□□□□ -0.41
SH2D4A-202ENST00000518040 FLIIQ13045 1269 aa12.47□□□□□ -0.41
SH2D4A-202ENST00000518040 CAVIN4Q5BKX8 364 aa12.47□□□□□ -0.41
SH2D4A-202ENST00000518040 APOBEC3HQ6NTF7 200 aaKnown RBP12.47□□□□□ -0.41
SH2D4A-202ENST00000518040 TSPYL6Q8N831 410 aa12.47□□□□□ -0.41
SH2D4A-202ENST00000518040 SMCR8Q8TEV9 937 aaPredicted RBP12.47□□□□□ -0.41
SH2D4A-202ENST00000518040 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
SH2D4A-202ENST00000518040 HMGCRP04035 888 aa12.46□□□□□ -0.41
SH2D4A-202ENST00000518040 FKBP5Q13451 457 aaPredicted RBP12.46□□□□□ -0.41
SH2D4A-202ENST00000518040 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
SH2D4A-202ENST00000518040 DIS3LQ8TF46 1054 aaKnown RBP12.46□□□□□ -0.41
SH2D4A-202ENST00000518040 HMX1Q9NP08 348 aaPredicted RBP12.46□□□□□ -0.41
SH2D4A-202ENST00000518040 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 SYN1P17600 705 aa12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 G2E3Q7L622 706 aa12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 FBXO33Q7Z6M2 555 aa12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 MROH5Q6ZUA9 1318 aa12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 CHAF1AQ13111 956 aaPredicted RBP12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 ZNF594Q96JF6 807 aaPredicted RBP12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 PICK1Q9NRD5 415 aa12.45□□□□□ -0.42
SH2D4A-202ENST00000518040 APAF1O14727 1248 aa12.44□□□□□ -0.42
SH2D4A-202ENST00000518040 GRIK5Q16478 980 aa12.44□□□□□ -0.42
SH2D4A-202ENST00000518040 FAM110CQ1W6H9 321 aa12.44□□□□□ -0.42
SH2D4A-202ENST00000518040 TWISTNBQ3B726 338 aaPredicted RBP12.44□□□□□ -0.42
SH2D4A-202ENST00000518040 MIER1Q8N108 512 aa12.44□□□□□ -0.42
SH2D4A-202ENST00000518040 PNMA3Q9UL41 463 aa12.44□□□□□ -0.42
SH2D4A-202ENST00000518040 SCYL3Q8IZE3 742 aa12.43□□□□□ -0.42
SH2D4A-202ENST00000518040 GUCD1Q96NT3 240 aa12.43□□□□□ -0.42
SH2D4A-202ENST00000518040 OGDHLQ9ULD0 1010 aa12.43□□□□□ -0.42
SH2D4A-202ENST00000518040 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
SH2D4A-202ENST00000518040 ZNF697Q5TEC3 545 aa12.42□□□□□ -0.42
SH2D4A-202ENST00000518040 GADL1Q6ZQY3 521 aa12.42□□□□□ -0.42
SH2D4A-202ENST00000518040 IQSEC3Q9UPP2 1182 aaPredicted RBP12.42□□□□□ -0.42
SH2D4A-202ENST00000518040 AFG3L2Q9Y4W6 797 aa12.42□□□□□ -0.42
SH2D4A-202ENST00000518040 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 DDX60LQ5H9U9 1706 aaKnown RBP12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 COL2A1P02458 1487 aaPredicted RBP12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 KIF16BQ96L93 1317 aa12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 GRM8O00222 908 aa12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 PTPRAP18433 802 aa12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 GCLCP48506 637 aaPredicted RBP12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 TCP10Q12799 353 aa12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 ANKRD13CQ8N6S4 541 aa12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 WDR66Q8TBY9 1149 aa12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 AGTPBP1Q9UPW5 1226 aa12.41□□□□□ -0.42
SH2D4A-202ENST00000518040 AK9Q5TCS8 1911 aa12.4□□□□□ -0.42
SH2D4A-202ENST00000518040 BEND3Q5T5X7 828 aa12.4□□□□□ -0.42
SH2D4A-202ENST00000518040 LBHD1Q9BQE6 289 aaPredicted RBP12.4□□□□□ -0.42
SH2D4A-202ENST00000518040 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.42
SH2D4A-202ENST00000518040 VCANP13611 3396 aa12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 PHF20L1A8MW92 1017 aa12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 EPHA10Q5JZY3 1008 aa12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 TRMT44Q8IYL2 757 aaKnown RBP12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 TSR2Q969E8 191 aaKnown RBP12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 PFASO15067 1338 aa12.39□□□□□ -0.43
SH2D4A-202ENST00000518040 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 PDE8BO95263 885 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 COL6A1P12109 1028 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 PROCA1Q8NCQ7 364 aaPredicted RBP12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 MAFAQ8NHW3 353 aaPredicted RBP12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 ENTPD3O75355 529 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 MDM2Q00987 491 aaPredicted RBP12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 MAP3K10Q02779 954 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 NFIAQ12857 509 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 METTL24Q5JXM2 366 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 MAP3K21Q5TCX8 1036 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 TSPYL2Q9H2G4 693 aaPredicted RBP12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 FAM198AQ9UFP1 575 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 GJD2Q9UKL4 321 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 DAGLAQ9Y4D2 1042 aa12.38□□□□□ -0.43
SH2D4A-202ENST00000518040 DOCK3Q8IZD9 2030 aa12.37□□□□□ -0.43
SH2D4A-202ENST00000518040 ALDH1L1O75891 902 aa12.37□□□□□ -0.43
SH2D4A-202ENST00000518040 XRCC5P13010 732 aaKnown RBP12.37□□□□□ -0.43
SH2D4A-202ENST00000518040 COL9A1P20849 921 aa12.37□□□□□ -0.43
SH2D4A-202ENST00000518040 FAM161BQ96MY7 647 aa12.37□□□□□ -0.43
SH2D4A-202ENST00000518040 CDX2Q99626 313 aaPredicted RBP12.37□□□□□ -0.43
SH2D4A-202ENST00000518040 USP40Q9NVE5 1235 aa12.37□□□□□ -0.43
SH2D4A-202ENST00000518040 ATRNL1Q5VV63 1379 aa12.37□□□□□ -0.43
SH2D4A-202ENST00000518040 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
SH2D4A-202ENST00000518040 CCDC27Q2M243 656 aa12.36□□□□□ -0.43
SH2D4A-202ENST00000518040 SOCS4Q8WXH5 440 aa12.36□□□□□ -0.43
SH2D4A-202ENST00000518040 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
SH2D4A-202ENST00000518040 PRKAG2Q9UGJ0 569 aa12.36□□□□□ -0.43
SH2D4A-202ENST00000518040 PTPRFP10586 1907 aa12.36□□□□□ -0.43
SH2D4A-202ENST00000518040 IL16Q14005 1332 aa12.36□□□□□ -0.43
SH2D4A-202ENST00000518040 PUM3Q15397 648 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms