RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CENPTQ96BT3 561 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 TBC1D20Q96BZ9 403 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 L3MBTL3Q96JM7 780 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 RMI1Q9H9A7 625 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 C9orf78Q9NZ63 289 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 CGNQ9P2M7 1197 aaKnown RBP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 A6NCN8 305 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 PRRT4C9JH25 899 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 SOCS7O14512 581 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 IL2RBP14784 551 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 EPB42P16452 691 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 MASP1P48740 699 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 CCT2P78371 535 aaKnown RBP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 MTMR3Q13615 1198 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 KRT27Q7Z3Y8 459 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 TAF4BQ92750 862 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 SELENOOQ9BVL4 669 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 PDCL3Q9H2J4 239 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 PRKRIP1Q9H875 184 aaPredicted RBP5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 ANKRD26Q9UPS8 1709 aa5.91□□□□□ -1.46
TRAPPC11-208ENST00000511955 RTL1A6NKG5 1358 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 USP54Q70EL1 1684 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 SORBS3O60504 671 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 ECEL1O95672 775 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 CCDC175P0C221 793 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 HOXC13P31276 330 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 SMAP1Q8IYB5 467 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 SPICE1Q8N0Z3 855 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 CLP1Q92989 425 aaKnown RBP5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 SYTL4Q96C24 671 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 IPO9Q96P70 1041 aaKnown RBP5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 FMNL2Q96PY5 1086 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 IWS1Q96ST2 819 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 CCDC94Q9BW85 323 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 LGR6Q9HBX8 967 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 HMX1Q9NP08 348 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 NGRNQ9NPE2 291 aaKnown RBP5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 GPHNQ9NQX3 736 aaPredicted RBP5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 USP25Q9UHP3 1055 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 GTF2A1LQ9UNN4 478 aa5.9□□□□□ -1.46
TRAPPC11-208ENST00000511955 RGPD2P0DJD1 1756 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 ESYT3A0FGR9 886 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 C19orf67A6NJJ6 358 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 KIF5CO60282 957 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 PIP5K1CO60331 668 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 IFIT2P09913 472 aaKnown RBP5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 PAX7P23759 505 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 C16orf54Q6UWD8 224 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 RGL4Q8IZJ4 473 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 EFCAB3Q8N7B9 438 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 ACSBG1Q96GR2 724 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF496Q96IT1 587 aaPredicted RBP5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 NBPF3Q9H094 633 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 MRGBPQ9NV56 204 aa5.9□□□□□ -1.47
TRAPPC11-208ENST00000511955 PARD3Q8TEW0 1356 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 SMTNL1A8MU46 457 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 VAMP4O75379 141 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 TCEA3O75764 348 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 TATP17735 454 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 OSBPP22059 807 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 CNGA1P29973 690 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 IL13P35225 146 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 SNX16P57768 344 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 PPP1R15BQ5SWA1 713 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 MAATS1Q7Z4T9 603 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZFPM2Q8WW38 1151 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 JPH3Q8WXH2 748 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 RPGRQ92834 1020 aaKnown RBP5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 SMARCC1Q92922 1105 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 PGBD4Q96DM1 585 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 NELL2Q99435 816 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 DUSP9Q99956 384 aaKnown RBP5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 DHX36Q9H2U1 1008 aaKnown RBP5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 ZNF69Q9UC07 566 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 ATP8A1Q9Y2Q0 1164 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 NPC1L1Q9UHC9 1359 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 CDK12Q9NYV4 1490 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 MEGF6O75095 1541 aa5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.89□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L15C9J2P7 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L10C9JJH3 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L13C9JLJ4 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L12C9JPN9 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L11C9JVI0 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L21D6R901 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L18D6R9N7 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L22D6RA61 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L17D6RBQ6 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L19D6RCP7 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L20D6RJB6 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 KIF1CO43896 1103 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 ICMTO60725 284 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 NBNO60934 754 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 TRIM37O94972 964 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 EPHB1P54762 984 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 USP17L24Q0WX57 530 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 PTGDRQ13258 359 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 PPP2R5BQ15173 497 aa5.88□□□□□ -1.47
TRAPPC11-208ENST00000511955 HSP90B2PQ58FF3 399 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms