RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 GJA5P36382 358 aa21.69■■□□□ 1.06
SMN1-204ENST00000506163 MKRN3Q13064 507 aaKnown RBP21.69■■□□□ 1.06
SMN1-204ENST00000506163 TTF1Q15361 905 aaPredicted RBP21.69■■□□□ 1.06
SMN1-204ENST00000506163 MIGA1Q8NAN2 632 aa21.69■■□□□ 1.06
SMN1-204ENST00000506163 GCC1Q96CN9 775 aa21.69■■□□□ 1.06
SMN1-204ENST00000506163 SLC10A4Q96EP9 437 aa21.69■■□□□ 1.06
SMN1-204ENST00000506163 OTOFQ9HC10 1997 aa21.68■■□□□ 1.06
SMN1-204ENST00000506163 TCRBV5S4A2TA0A5A2 114 aa21.68■■□□□ 1.06
SMN1-204ENST00000506163 PDE6AP16499 860 aa21.68■■□□□ 1.06
SMN1-204ENST00000506163 MAP3K9P80192 1104 aa21.68■■□□□ 1.06
SMN1-204ENST00000506163 SPRYD7Q5W111 196 aa21.68■■□□□ 1.06
SMN1-204ENST00000506163 SMC5Q8IY18 1101 aa21.68■■□□□ 1.06
SMN1-204ENST00000506163 TEX11Q8IYF3 940 aa21.68■■□□□ 1.06
SMN1-204ENST00000506163 SALL3Q9BXA9 1300 aa21.68■■□□□ 1.06
SMN1-204ENST00000506163 UNCXA6NJT0 531 aa21.67■■□□□ 1.06
SMN1-204ENST00000506163 BAG3O95817 575 aa21.67■■□□□ 1.06
SMN1-204ENST00000506163 MAP4K4O95819 1239 aaPredicted RBP21.67■■□□□ 1.06
SMN1-204ENST00000506163 VGLL4Q14135 290 aa21.67■■□□□ 1.06
SMN1-204ENST00000506163 SLC9C2Q5TAH2 1124 aa21.67■■□□□ 1.06
SMN1-204ENST00000506163 ANKRD13AQ8IZ07 590 aa21.67■■□□□ 1.06
SMN1-204ENST00000506163 CNKSR2Q8WXI2 1034 aa21.67■■□□□ 1.06
SMN1-204ENST00000506163 RWDD1Q9H446 243 aaPredicted RBP21.67■■□□□ 1.06
SMN1-204ENST00000506163 INPP5BP32019 993 aa21.66■■□□□ 1.06
SMN1-204ENST00000506163 PI4K2BQ8TCG2 481 aa21.66■■□□□ 1.06
SMN1-204ENST00000506163 TGFBRAP1Q8WUH2 860 aa21.66■■□□□ 1.06
SMN1-204ENST00000506163 ZKSCAN4Q969J2 545 aaPredicted RBP21.66■■□□□ 1.06
SMN1-204ENST00000506163 OSBPL5Q9H0X9 879 aaPredicted RBP21.66■■□□□ 1.06
SMN1-204ENST00000506163 ELP3Q9H9T3 547 aa21.66■■□□□ 1.06
SMN1-204ENST00000506163 ZNF112Q9UJU3 913 aa21.66■■□□□ 1.06
SMN1-204ENST00000506163 CDK5RAP2Q96SN8 1893 aa21.65■■□□□ 1.06
SMN1-204ENST00000506163 ZNF532Q9HCE3 1301 aa21.65■■□□□ 1.06
SMN1-204ENST00000506163 MAP3K10Q02779 954 aa21.65■■□□□ 1.06
SMN1-204ENST00000506163 WNK4Q96J92 1243 aa21.65■■□□□ 1.06
SMN1-204ENST00000506163 WRNIP1Q96S55 665 aa21.65■■□□□ 1.06
SMN1-204ENST00000506163 RIOK1Q9BRS2 568 aaKnown RBP21.65■■□□□ 1.06
SMN1-204ENST00000506163 DCAF15Q66K64 600 aa21.64■■□□□ 1.06
SMN1-204ENST00000506163 MAPKAPK5Q8IW41 473 aa21.64■■□□□ 1.06
SMN1-204ENST00000506163 ZSCAN29Q8IWY8 852 aaPredicted RBP21.64■■□□□ 1.06
SMN1-204ENST00000506163 NOL10Q9BSC4 688 aaKnown RBP21.64■■□□□ 1.06
SMN1-204ENST00000506163 ZNF341Q9BYN7 854 aa21.64■■□□□ 1.06
SMN1-204ENST00000506163 SNCAIPQ9Y6H5 919 aa21.64■■□□□ 1.06
SMN1-204ENST00000506163 PHF20L1A8MW92 1017 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 PLCG2P16885 1265 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 ADD2P35612 726 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 B4GALNT3Q6L9W6 998 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 HOOK2Q96ED9 719 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 TSKSQ9UJT2 592 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 FLT1P17948 1338 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 TTC41PQ6P2S7 1318 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 TMED8Q6PL24 325 aaPredicted RBP21.63■■□□□ 1.05
SMN1-204ENST00000506163 OPTNQ96CV9 577 aa21.63■■□□□ 1.05
SMN1-204ENST00000506163 FAM196BA6NMK8 535 aa21.62■■□□□ 1.05
SMN1-204ENST00000506163 HSPA8P11142 646 aaKnown RBP21.62■■□□□ 1.05
SMN1-204ENST00000506163 MX1P20591 662 aa21.62■■□□□ 1.05
SMN1-204ENST00000506163 GPATCH3Q96I76 525 aa21.62■■□□□ 1.05
SMN1-204ENST00000506163 LNPKQ9C0E8 428 aa21.62■■□□□ 1.05
SMN1-204ENST00000506163 FOCADQ5VW36 1801 aa21.61■■□□□ 1.05
SMN1-204ENST00000506163 TM4SF4P48230 202 aa21.61■■□□□ 1.05
SMN1-204ENST00000506163 AIDAQ96BJ3 306 aa21.61■■□□□ 1.05
SMN1-204ENST00000506163 RNF186Q9NXI6 227 aa21.61■■□□□ 1.05
SMN1-204ENST00000506163 STAP2Q9UGK3 403 aa21.61■■□□□ 1.05
SMN1-204ENST00000506163 PALD1Q9ULE6 856 aa21.61■■□□□ 1.05
SMN1-204ENST00000506163 COL2A1P02458 1487 aaPredicted RBP21.6■■□□□ 1.05
SMN1-204ENST00000506163 MAGEB6P1A0A0J9YX57 407 aa21.6■■□□□ 1.05
SMN1-204ENST00000506163 ZBTB48P10074 688 aaPredicted RBP21.6■■□□□ 1.05
SMN1-204ENST00000506163 LBX1P52954 281 aa21.6■■□□□ 1.05
SMN1-204ENST00000506163 LCORLQ8N3X6 602 aa21.6■■□□□ 1.05
SMN1-204ENST00000506163 SAP30BPQ9UHR5 308 aaKnown RBP21.6■■□□□ 1.05
SMN1-204ENST00000506163 CSADQ9Y600 493 aa21.6■■□□□ 1.05
SMN1-204ENST00000506163 SIPA1L1O43166 1804 aa21.59■■□□□ 1.05
SMN1-204ENST00000506163 TBC1D12O60347 775 aa21.59■■□□□ 1.05
SMN1-204ENST00000506163 CTCFP49711 727 aaPredicted RBP21.59■■□□□ 1.05
SMN1-204ENST00000506163 PDE1AP54750 535 aa21.59■■□□□ 1.05
SMN1-204ENST00000506163 NUCB1Q02818 461 aa21.59■■□□□ 1.05
SMN1-204ENST00000506163 RRP1BQ14684 758 aaKnown RBP21.59■■□□□ 1.05
SMN1-204ENST00000506163 UBE3CQ15386 1083 aa21.59■■□□□ 1.05
SMN1-204ENST00000506163 KBTBD3Q8NAB2 608 aa21.59■■□□□ 1.05
SMN1-204ENST00000506163 MS4A4AQ96JQ5 239 aa21.59■■□□□ 1.05
SMN1-204ENST00000506163 BEGAINQ9BUH8 593 aa21.59■■□□□ 1.05
SMN1-204ENST00000506163 SPDYE5A6NIY4 337 aa21.58■■□□□ 1.05
SMN1-204ENST00000506163 GLRX3O76003 335 aaKnown RBP21.58■■□□□ 1.05
SMN1-204ENST00000506163 NOL9Q5SY16 702 aaKnown RBP21.58■■□□□ 1.05
SMN1-204ENST00000506163 COL13A1Q5TAT6 717 aaPredicted RBP21.58■■□□□ 1.05
SMN1-204ENST00000506163 CHD1LQ86WJ1 897 aa21.58■■□□□ 1.05
SMN1-204ENST00000506163 OTUD5Q96G74 571 aa21.58■■□□□ 1.05
SMN1-204ENST00000506163 PTPN18Q99952 460 aa21.58■■□□□ 1.05
SMN1-204ENST00000506163 ARMT1Q9H993 441 aa21.58■■□□□ 1.05
SMN1-204ENST00000506163 ERC2O15083 957 aa21.57■■□□□ 1.04
SMN1-204ENST00000506163 PRKAB2O43741 272 aa21.57■■□□□ 1.04
SMN1-204ENST00000506163 TRPA1O75762 1119 aa21.57■■□□□ 1.04
SMN1-204ENST00000506163 SLC4A8Q2Y0W8 1093 aa21.57■■□□□ 1.04
SMN1-204ENST00000506163 REM2Q8IYK8 340 aaPredicted RBP21.57■■□□□ 1.04
SMN1-204ENST00000506163 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMN1-204ENST00000506163 PUS7LQ9H0K6 701 aaKnown RBP21.57■■□□□ 1.04
SMN1-204ENST00000506163 DNAJC18Q9H819 358 aa21.57■■□□□ 1.04
SMN1-204ENST00000506163 MYH7P12883 1935 aa21.57■■□□□ 1.04
SMN1-204ENST00000506163 MANSC4A6NHS7 340 aaPredicted RBP21.56■■□□□ 1.04
SMN1-204ENST00000506163 IGF2BP3O00425 579 aaKnown RBP eCLIP21.56■■□□□ 1.04
SMN1-204ENST00000506163 IRF6O14896 467 aa21.56■■□□□ 1.04
SMN1-204ENST00000506163 USP5P45974 858 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms