RNA–Protein interactions for RNA: ENST00000505564.2

AC012339.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012339.1, Length 941 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012339.1-201ENST00000505564 C2orf69Q8N8R5 385 aa12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 ZDHHC15Q96MV8 337 aa12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 KRTAP3-3Q9BYR6 98 aa12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 KRTAP3-2Q9BYR7 98 aa12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 PRDM10Q9NQV6 1147 aa12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 ARAP2Q8WZ64 1704 aa12.84□□□□□ -0.35
AC012339.1-201ENST00000505564 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 ADM5C9JUS6 153 aa12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 IGSF3O75054 1194 aa12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 MCAMP43121 646 aa12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 PPP2R3BQ9Y5P8 575 aa12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 ASTN2O75129 1339 aaPredicted RBP12.83□□□□□ -0.36
AC012339.1-201ENST00000505564 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
AC012339.1-201ENST00000505564 HDAC1Q13547 482 aaPredicted RBP12.82□□□□□ -0.36
AC012339.1-201ENST00000505564 GRIK5Q16478 980 aa12.82□□□□□ -0.36
AC012339.1-201ENST00000505564 SUPT20HL1Q3ZLR7 823 aa12.82□□□□□ -0.36
AC012339.1-201ENST00000505564 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
AC012339.1-201ENST00000505564 ZBED3Q96IU2 234 aaPredicted RBP12.82□□□□□ -0.36
AC012339.1-201ENST00000505564 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
AC012339.1-201ENST00000505564 MKRN1Q9UHC7 482 aaKnown RBP12.82□□□□□ -0.36
AC012339.1-201ENST00000505564 COL1A1P02452 1464 aaPredicted RBP12.81□□□□□ -0.36
AC012339.1-201ENST00000505564 ZAP70P43403 619 aa12.81□□□□□ -0.36
AC012339.1-201ENST00000505564 MAP3K12Q12852 859 aa12.81□□□□□ -0.36
AC012339.1-201ENST00000505564 TTLL12Q14166 644 aaPredicted RBP12.81□□□□□ -0.36
AC012339.1-201ENST00000505564 PI16Q6UXB8 463 aa12.81□□□□□ -0.36
AC012339.1-201ENST00000505564 TBC1D9Q6ZT07 1266 aa12.81□□□□□ -0.36
AC012339.1-201ENST00000505564 HOOK2Q96ED9 719 aa12.81□□□□□ -0.36
AC012339.1-201ENST00000505564 DEFB129Q9H1M3 183 aa12.81□□□□□ -0.36
AC012339.1-201ENST00000505564 MYH13Q9UKX3 1938 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 RASSF10A6NK89 507 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 TCP10L2B9ZVM9 353 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 BAG3O95817 575 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 FKBP1BP68106 108 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 MECOMQ03112 1051 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 DIXDC1Q155Q3 683 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 DEFB115Q30KQ5 88 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 ANKRD45Q5TZF3 282 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 GBA2Q9HCG7 927 aaPredicted RBP12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 USP40Q9NVE5 1235 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 PCDHAC2Q9Y5I4 1007 aa12.8□□□□□ -0.36
AC012339.1-201ENST00000505564 ZNF646O15015 1829 aaPredicted RBP12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 IDH1O75874 414 aaKnown RBP12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 CYP2E1P05181 493 aaPredicted RBP12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 NEFLP07196 543 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 ATP5JP18859 108 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 ECE1P42892 770 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 RASA3Q14644 834 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 CST9Q5W186 159 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 APOBEC3HQ6NTF7 200 aaKnown RBP12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 ARMC9Q7Z3E5 817 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 WBP1LQ9NX94 342 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 SCAF8Q9UPN6 1271 aaKnown RBP12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
AC012339.1-201ENST00000505564 ERC2O15083 957 aa12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 FOXN1O15353 648 aa12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 PPP1R12BO60237 982 aaPredicted RBP12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 MAP4K4O95819 1239 aaPredicted RBP12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 VEGFBP49765 207 aa12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 HUNKP57058 714 aa12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 FKBP1CQ5VVH2 108 aa12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 CERS3Q8IU89 383 aa12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 NSUN4Q96CB9 384 aaKnown RBP12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 TLL2Q9Y6L7 1015 aa12.78□□□□□ -0.36
AC012339.1-201ENST00000505564 GOLIM4O00461 696 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 BTDP43251 543 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 GRM1Q13255 1194 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 PRAMEF18Q5VWM3 479 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 ZSCAN25Q6NSZ9 544 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 CDC42EP5Q6NZY7 148 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 SAPCD2Q86UD0 394 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 FAM83AQ86UY5 434 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 BOLA2Q9H3K6 86 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 PAG1Q9NWQ8 432 aa12.77□□□□□ -0.37
AC012339.1-201ENST00000505564 GPR75-ASB3A0A0A6YYF3 556 aa12.76□□□□□ -0.37
AC012339.1-201ENST00000505564 CYP7A1P22680 504 aa12.76□□□□□ -0.37
AC012339.1-201ENST00000505564 CACNB3P54284 484 aa12.76□□□□□ -0.37
AC012339.1-201ENST00000505564 MAP2K1Q02750 393 aaPredicted RBP12.76□□□□□ -0.37
AC012339.1-201ENST00000505564 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
AC012339.1-201ENST00000505564 B4GALNT3Q6L9W6 998 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms