RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
DHFR-202ENST00000504396 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
DHFR-202ENST00000504396 TATDN2Q93075 761 aa11.48□□□□□ -0.57
DHFR-202ENST00000504396 PNMA3Q9UL41 463 aa11.48□□□□□ -0.57
DHFR-202ENST00000504396 TTF2Q9UNY4 1162 aaKnown RBP11.48□□□□□ -0.57
DHFR-202ENST00000504396 TCP10L2B9ZVM9 353 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
DHFR-202ENST00000504396 ARHGEF6Q15052 776 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
DHFR-202ENST00000504396 SLC9C1Q4G0N8 1177 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 MFSD14BQ5SR56 506 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 LMBR1LQ6UX01 489 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 LDHAL6AQ6ZMR3 332 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 WWC1Q8IX03 1113 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 ZNF594Q96JF6 807 aaPredicted RBP11.47□□□□□ -0.57
DHFR-202ENST00000504396 TDRD3Q9H7E2 651 aaKnown RBP11.47□□□□□ -0.57
DHFR-202ENST00000504396 CSADQ9Y600 493 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 ARAP2Q8WZ64 1704 aa11.47□□□□□ -0.57
DHFR-202ENST00000504396 CCL15-CCL14A0A0B4J2E2 113 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 F6X3S4 739 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 WDHD1O75717 1129 aaPredicted RBP11.46□□□□□ -0.57
DHFR-202ENST00000504396 TNNI2P48788 182 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 CCL15Q16663 113 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 SMYD5Q6GMV2 418 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 NUDT18Q6ZVK8 323 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 NBPF11Q86T75 865 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 ARMC5Q96C12 935 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 PTPN18Q99952 460 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 ZFYVE28Q9HCC9 887 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 ZNF70Q9UC06 446 aaPredicted RBP11.46□□□□□ -0.57
DHFR-202ENST00000504396 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
DHFR-202ENST00000504396 FANCIQ9NVI1 1328 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 IRS2Q9Y4H2 1338 aa11.46□□□□□ -0.57
DHFR-202ENST00000504396 FRAT2O75474 233 aaPredicted RBP11.45□□□□□ -0.58
DHFR-202ENST00000504396 GYG1P46976 350 aa11.45□□□□□ -0.58
DHFR-202ENST00000504396 GTF2A2P52657 109 aa11.45□□□□□ -0.58
DHFR-202ENST00000504396 FOXO4P98177 505 aa11.45□□□□□ -0.58
DHFR-202ENST00000504396 VGLL4Q14135 290 aa11.45□□□□□ -0.58
DHFR-202ENST00000504396 VPS37DQ86XT2 251 aa11.45□□□□□ -0.58
DHFR-202ENST00000504396 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
DHFR-202ENST00000504396 C9orf78Q9NZ63 289 aaPredicted RBP11.45□□□□□ -0.58
DHFR-202ENST00000504396 PTCH2Q9Y6C5 1203 aa11.45□□□□□ -0.58
DHFR-202ENST00000504396 HTTP42858 3142 aa11.44□□□□□ -0.58
DHFR-202ENST00000504396 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
DHFR-202ENST00000504396 CHAF1AQ13111 956 aaPredicted RBP11.44□□□□□ -0.58
DHFR-202ENST00000504396 KIF22Q14807 665 aa11.44□□□□□ -0.58
DHFR-202ENST00000504396 SLC4A10Q6U841 1118 aa11.44□□□□□ -0.58
DHFR-202ENST00000504396 DZIP1LQ8IYY4 767 aaKnown RBP11.44□□□□□ -0.58
DHFR-202ENST00000504396 SERPINA10Q9UK55 444 aa11.44□□□□□ -0.58
DHFR-202ENST00000504396 GRM8O00222 908 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 HIBADHP31937 336 aaKnown RBP11.43□□□□□ -0.58
DHFR-202ENST00000504396 CRKP46108 304 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 EPHA10Q5JZY3 1008 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 ZNF333Q96JL9 665 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 TMOD2Q9NZR1 351 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 IQSEC3Q9UPP2 1182 aaPredicted RBP11.43□□□□□ -0.58
DHFR-202ENST00000504396 CENPFP49454 3210 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 ZSWIM8A7E2V4 1837 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 CACNB3P54284 484 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 CAP1Q01518 475 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 EXOSC9Q06265 439 aaKnown RBP11.43□□□□□ -0.58
DHFR-202ENST00000504396 BEND3Q5T5X7 828 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.43□□□□□ -0.58
DHFR-202ENST00000504396 FAM43AQ8N2R8 423 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 FAM205AQ6ZU69 1335 aa11.43□□□□□ -0.58
DHFR-202ENST00000504396 MKI67P46013 3256 aaKnown RBP11.42□□□□□ -0.58
DHFR-202ENST00000504396 UBE4AQ14139 1066 aa11.42□□□□□ -0.58
DHFR-202ENST00000504396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.42□□□□□ -0.581e-9■■□□□ 13.5
DHFR-202ENST00000504396 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
DHFR-202ENST00000504396 SH3TC2Q8TF17 1288 aa11.42□□□□□ -0.58
DHFR-202ENST00000504396 WRNIP1Q96S55 665 aa11.42□□□□□ -0.58
DHFR-202ENST00000504396 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.42□□□□□ -0.58
DHFR-202ENST00000504396 VAMP4O75379 141 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 CETPP11597 493 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 FXR1P51114 621 aaKnown RBP eCLIP11.41□□□□□ -0.58
DHFR-202ENST00000504396 CCDC184Q52MB2 194 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 CAVIN4Q5BKX8 364 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 WDR63Q8IWG1 891 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 TEKT1Q969V4 418 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 LRCH3Q96II8 777 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 FAM84BQ96KN1 310 aaPredicted RBP11.41□□□□□ -0.58
DHFR-202ENST00000504396 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 ARHGAP39Q9C0H5 1083 aa11.41□□□□□ -0.58
DHFR-202ENST00000504396 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.58
DHFR-202ENST00000504396 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
DHFR-202ENST00000504396 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.58
DHFR-202ENST00000504396 SNAPC2Q13487 334 aa11.4□□□□□ -0.58
DHFR-202ENST00000504396 METTL24Q5JXM2 366 aa11.4□□□□□ -0.58
DHFR-202ENST00000504396 PUS3Q9BZE2 481 aaKnown RBP11.4□□□□□ -0.58
DHFR-202ENST00000504396 SRCIN1Q9C0H9 1055 aa11.4□□□□□ -0.58
DHFR-202ENST00000504396 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
DHFR-202ENST00000504396 BRCA2P51587 3418 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 TLR2O60603 784 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 ALDH1L1O75891 902 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 LACTBP83111 547 aaPredicted RBP11.39□□□□□ -0.59
DHFR-202ENST00000504396 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 TBC1D22AQ8WUA7 517 aa11.39□□□□□ -0.59
DHFR-202ENST00000504396 ZKSCAN4Q969J2 545 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms