RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 IQCA1Q86XH1 822 aa17.06■□□□□ 0.32
PARP1-209ENST00000498787 JAG2Q9Y219 1238 aa17.06■□□□□ 0.32
PARP1-209ENST00000498787 NEDD4P46934 1319 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 EP400Q96L91 3159 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 USP17L21D6R901 530 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 CPLX1O14810 134 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 KDM4AO75164 1064 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 BTDP43251 543 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 SCRN1Q12765 414 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 HHIPL2Q6UWX4 724 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 CHST3Q7LGC8 479 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 PSMD1Q99460 953 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 ZSWIM5Q9P217 1185 aa17.05■□□□□ 0.32
PARP1-209ENST00000498787 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 CCDC88AQ3V6T2 1871 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 MYO5AQ9Y4I1 1855 aaKnown RBP17.04■□□□□ 0.32
PARP1-209ENST00000498787 CCDC196A0A1B0GTZ2 297 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 GOLGA8BA8MQT2 603 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 WTAPQ15007 396 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 RRP12Q5JTH9 1297 aaKnown RBP17.04■□□□□ 0.32
PARP1-209ENST00000498787 IGDCC4Q8TDY8 1250 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 ZDHHC9Q9Y397 364 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
PARP1-209ENST00000498787 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
PARP1-209ENST00000498787 LAMA4Q16363 1823 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 USP17L3A6NCW0 530 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 USP17L4A6NCW7 530 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 ZBTB43O43298 467 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 ST3GAL1Q11201 340 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 DIXDC1Q155Q3 683 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 DOK7Q18PE1 504 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 CYB5R4Q7L1T6 521 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 USP17L1Q7RTZ2 530 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 TEX11Q8IYF3 940 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 PIM2Q9P1W9 311 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 KIAA1551Q9HCM1 1747 aa17.03■□□□□ 0.32
PARP1-209ENST00000498787 H3BQV1 296 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 ECE2O60344 883 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 F13A1P00488 732 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.32
PARP1-209ENST00000498787 CALM1P0DP23 149 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 CALM2P0DP24 149 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 CALM3P0DP25 149 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 NCLP19338 710 aaKnown RBP17.02■□□□□ 0.32
PARP1-209ENST00000498787 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.32
PARP1-209ENST00000498787 PKP1Q13835 747 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 COL9A3Q14050 684 aaPredicted RBP17.02■□□□□ 0.32
PARP1-209ENST00000498787 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 C12orf60Q5U649 245 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 SLC51AQ86UW1 340 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 NSUN7Q8NE18 718 aaKnown RBP17.02■□□□□ 0.32
PARP1-209ENST00000498787 SH3RF3Q8TEJ3 882 aaPredicted RBP17.02■□□□□ 0.32
PARP1-209ENST00000498787 TEKT1Q969V4 418 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 LY9Q9HBG7 655 aa17.02■□□□□ 0.32
PARP1-209ENST00000498787 MKRN1Q9UHC7 482 aaKnown RBP17.02■□□□□ 0.32
PARP1-209ENST00000498787 TTF2Q9UNY4 1162 aaKnown RBP17.02■□□□□ 0.32
PARP1-209ENST00000498787 MYO3BQ8WXR4 1341 aa17.01■□□□□ 0.31
PARP1-209ENST00000498787 VPS37CA5D8V6 355 aaPredicted RBP17.01■□□□□ 0.31
PARP1-209ENST00000498787 C21orf2O43822 256 aa17.01■□□□□ 0.31
PARP1-209ENST00000498787 RANBP6O60518 1105 aaKnown RBP17.01■□□□□ 0.31
PARP1-209ENST00000498787 DPEP1P16444 411 aa17.01■□□□□ 0.31
PARP1-209ENST00000498787 CCT2P78371 535 aaKnown RBP17.01■□□□□ 0.31
PARP1-209ENST00000498787 APOA5Q6Q788 366 aa17.01■□□□□ 0.31
PARP1-209ENST00000498787 TGFBRAP1Q8WUH2 860 aa17.01■□□□□ 0.31
PARP1-209ENST00000498787 ZSCAN16Q9H4T2 348 aaPredicted RBP17.01■□□□□ 0.31
PARP1-209ENST00000498787 MTMR6Q9Y217 621 aa17.01■□□□□ 0.31
PARP1-209ENST00000498787 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
PARP1-209ENST00000498787 PTPDC1A2A3K4 754 aa17■□□□□ 0.31
PARP1-209ENST00000498787 PPIP5K2O43314 1243 aa17■□□□□ 0.31
PARP1-209ENST00000498787 TRAK2O60296 914 aa17■□□□□ 0.31
PARP1-209ENST00000498787 MCTP1Q6DN14 999 aa17■□□□□ 0.31
PARP1-209ENST00000498787 OLFM4Q6UX06 510 aa17■□□□□ 0.31
PARP1-209ENST00000498787 TTC6Q86TZ1 520 aa17■□□□□ 0.31
PARP1-209ENST00000498787 WASF1Q92558 559 aa17■□□□□ 0.31
PARP1-209ENST00000498787 ZSCAN10Q96SZ4 725 aaPredicted RBP17■□□□□ 0.31
PARP1-209ENST00000498787 PDGFDQ9GZP0 370 aaPredicted RBP17■□□□□ 0.31
PARP1-209ENST00000498787 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
PARP1-209ENST00000498787 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
PARP1-209ENST00000498787 DAGLAQ9Y4D2 1042 aa17■□□□□ 0.31
PARP1-209ENST00000498787 CD2APQ9Y5K6 639 aa17■□□□□ 0.31
PARP1-209ENST00000498787 NID2Q14112 1375 aa17■□□□□ 0.31
PARP1-209ENST00000498787 ROBO3Q96MS0 1386 aa17■□□□□ 0.31
PARP1-209ENST00000498787 GOLGA8AA7E2F4 631 aa16.99■□□□□ 0.31
PARP1-209ENST00000498787 GRIK5Q16478 980 aa16.99■□□□□ 0.31
PARP1-209ENST00000498787 DALRD3Q5D0E6 543 aaKnown RBP16.99■□□□□ 0.31
PARP1-209ENST00000498787 ZNF444Q8N0Y2 327 aaPredicted RBP16.99■□□□□ 0.31
PARP1-209ENST00000498787 DBNDD1Q9H9R9 158 aa16.99■□□□□ 0.31
PARP1-209ENST00000498787 MKNK2Q9HBH9 465 aa16.99■□□□□ 0.31
PARP1-209ENST00000498787 ZBTB7AO95365 584 aa16.98■□□□□ 0.31
PARP1-209ENST00000498787 MMP14P50281 582 aa16.98■□□□□ 0.31
PARP1-209ENST00000498787 RHBDL3P58872 404 aa16.98■□□□□ 0.31
PARP1-209ENST00000498787 DACT2Q5SW24 774 aa16.98■□□□□ 0.31
PARP1-209ENST00000498787 IFIT1BQ5T764 474 aaKnown RBP16.98■□□□□ 0.31
PARP1-209ENST00000498787 CATIPQ7Z7H3 387 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms