RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 ODR4Q5SWX8 454 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 CCSAPQ6IQ19 270 aaPredicted RBP10.71□□□□□ -0.69
RPSA-209ENST00000495394 LILRB2Q8N423 598 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 DCLK2Q8N568 766 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 USP6NLQ92738 828 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 MIEF2Q96C03 454 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 DHTKD1Q96HY7 919 aaPredicted RBP10.71□□□□□ -0.69
RPSA-209ENST00000495394 VRTNQ9H8Y1 702 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 TMEM165Q9HC07 324 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 PICK1Q9NRD5 415 aa10.71□□□□□ -0.69
RPSA-209ENST00000495394 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.71□□□□□ -0.69
RPSA-209ENST00000495394 PARD3Q8TEW0 1356 aa10.71□□□□□ -0.7
RPSA-209ENST00000495394 ITSN1Q15811 1721 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 A6NJY4 79 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 ERLIN1O75477 346 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 SLC4A2P04920 1241 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 SRGNP10124 158 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 ATF3P18847 181 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 KIF5BP33176 963 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 NASPP49321 788 aaPredicted RBP10.7□□□□□ -0.7
RPSA-209ENST00000495394 UBXN2AP68543 259 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 ARHGEF6Q15052 776 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 UNC5DQ6UXZ4 953 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 TAS1R3Q7RTX0 852 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 KRT222Q8N1A0 295 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 RNF214Q8ND24 703 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 FAM76AQ8TAV0 307 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 RTF1Q92541 710 aaKnown RBP10.7□□□□□ -0.7
RPSA-209ENST00000495394 TBC1D5Q92609 795 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.7□□□□□ -0.7
RPSA-209ENST00000495394 OSBPL5Q9H0X9 879 aaPredicted RBP10.7□□□□□ -0.7
RPSA-209ENST00000495394 EPB41L4AQ9HCS5 686 aaPredicted RBP10.7□□□□□ -0.7
RPSA-209ENST00000495394 INTUQ9ULD6 942 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 RGPD8O14715 1765 aaPredicted RBP10.7□□□□□ -0.7
RPSA-209ENST00000495394 SMG6Q86US8 1419 aaKnown RBP10.7□□□□□ -0.7
RPSA-209ENST00000495394 A0A0B4J203 849 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 SLC26A4O43511 780 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 B3GALNT1O75752 331 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 NEBLO76041 1014 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 PDGFRBP09619 1106 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 INPP5BP32019 993 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 TMF1P82094 1093 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 KBTBD12Q3ZCT8 623 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 SPDYCQ5MJ68 293 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 C9orf131Q5VYM1 1079 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 IRGCQ6NXR0 463 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 FIP1L1Q6UN15 594 aaKnown RBP10.7□□□□□ -0.7
RPSA-209ENST00000495394 ARMC9Q7Z3E5 817 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 TEX19Q8NA77 164 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 MYRIPQ8NFW9 859 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 ANKRD49Q8WVL7 239 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 RBM17Q96I25 401 aaKnown RBP10.7□□□□□ -0.7
RPSA-209ENST00000495394 IER2Q9BTL4 223 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 CCDC68Q9H2F9 335 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 SQORQ9Y6N5 450 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 ROBO1Q9Y6N7 1651 aa10.7□□□□□ -0.7
RPSA-209ENST00000495394 IQCB1Q15051 598 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 KIAA0753Q2KHM9 967 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 TTC31Q49AM3 519 aaPredicted RBP10.69□□□□□ -0.7
RPSA-209ENST00000495394 CCDC152Q4G0S7 254 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 RAVER1Q8IY67 606 aaKnown RBP10.69□□□□□ -0.7
RPSA-209ENST00000495394 ZNF710Q8N1W2 664 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 ZNF483Q8TF39 744 aaPredicted RBP10.69□□□□□ -0.7
RPSA-209ENST00000495394 DNAAF4Q8WXU2 420 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 PANK2Q9BZ23 570 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 MINK1Q8N4C8 1332 aaPredicted RBP10.69□□□□□ -0.7
RPSA-209ENST00000495394 MST1RQ04912 1400 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 TULP4Q9NRJ4 1543 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 TBKBP1A7MCY6 615 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 PER1O15534 1290 aaPredicted RBP10.69□□□□□ -0.7
RPSA-209ENST00000495394 AKR1B10O60218 316 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 DIAPH1O60610 1272 aaKnown RBP10.69□□□□□ -0.7
RPSA-209ENST00000495394 REC8O95072 547 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 TPM1P09493 284 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
RPSA-209ENST00000495394 UBASH3AP57075 661 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 AMPD3Q01432 767 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 VPS72Q15906 364 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 ZNF772Q68DY9 489 aaPredicted RBP10.69□□□□□ -0.7
RPSA-209ENST00000495394 RASGRP2Q7LDG7 609 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 SH3KBP1Q96B97 665 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 CENPOQ9BU64 300 aa10.69□□□□□ -0.7
RPSA-209ENST00000495394 USP32Q8NFA0 1604 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 JCADQ9P266 1359 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 CNGA3Q16281 694 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 CLPPQ16740 277 aaPredicted RBP10.68□□□□□ -0.7
RPSA-209ENST00000495394 GNPTABQ3T906 1256 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 HS1BP3Q53T59 392 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 MTHFD1LQ6UB35 978 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 OLFML1Q6UWY5 402 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 DZIP1Q86YF9 867 aaKnown RBP10.68□□□□□ -0.7
RPSA-209ENST00000495394 ATP11CQ8NB49 1132 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 FAM167BQ9BTA0 163 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 TAOK3Q9H2K8 898 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 PPCSQ9HAB8 311 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 LGR6Q9HBX8 967 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 PRKAG2Q9UGJ0 569 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
RPSA-209ENST00000495394 MRPL42Q9Y6G3 142 aaKnown RBP10.68□□□□□ -0.7
RPSA-209ENST00000495394 SOS1Q07889 1333 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms