RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 ZBTB48P10074 688 aaPredicted RBP23.25■■□□□ 1.31
PCMT1-209ENST00000494411 SH3BP5LQ7L8J4 393 aa23.25■■□□□ 1.31
PCMT1-209ENST00000494411 TEX11Q8IYF3 940 aa23.25■■□□□ 1.31
PCMT1-209ENST00000494411 SH3RF3Q8TEJ3 882 aaPredicted RBP23.25■■□□□ 1.31
PCMT1-209ENST00000494411 DNAJC2Q99543 621 aaKnown RBP23.25■■□□□ 1.31
PCMT1-209ENST00000494411 ZNF341Q9BYN7 854 aa23.25■■□□□ 1.31
PCMT1-209ENST00000494411 RNF186Q9NXI6 227 aa23.25■■□□□ 1.31
PCMT1-209ENST00000494411 CSADQ9Y600 493 aa23.25■■□□□ 1.31
PCMT1-209ENST00000494411 ATRNL1Q5VV63 1379 aa23.25■■□□□ 1.31
PCMT1-209ENST00000494411 BAG3O95817 575 aa23.24■■□□□ 1.31
PCMT1-209ENST00000494411 CYP7A1P22680 504 aa23.24■■□□□ 1.31
PCMT1-209ENST00000494411 GJA5P36382 358 aa23.24■■□□□ 1.31
PCMT1-209ENST00000494411 MAP3K12Q12852 859 aa23.24■■□□□ 1.31
PCMT1-209ENST00000494411 ZSCAN29Q8IWY8 852 aaPredicted RBP23.24■■□□□ 1.31
PCMT1-209ENST00000494411 MAGEB6Q8N7X4 407 aa23.24■■□□□ 1.31
PCMT1-209ENST00000494411 DDTLA6NHG4 134 aaPredicted RBP23.23■■□□□ 1.31
PCMT1-209ENST00000494411 GOLIM4O00461 696 aa23.23■■□□□ 1.31
PCMT1-209ENST00000494411 TRPA1O75762 1119 aa23.23■■□□□ 1.31
PCMT1-209ENST00000494411 ATP5JP18859 108 aa23.23■■□□□ 1.31
PCMT1-209ENST00000494411 SREBF2Q12772 1141 aa23.23■■□□□ 1.31
PCMT1-209ENST00000494411 TTF1Q15361 905 aaPredicted RBP23.23■■□□□ 1.31
PCMT1-209ENST00000494411 CNKSR2Q8WXI2 1034 aa23.23■■□□□ 1.31
PCMT1-209ENST00000494411 ZKSCAN4Q969J2 545 aaPredicted RBP23.23■■□□□ 1.31
PCMT1-209ENST00000494411 OPTNQ96CV9 577 aa23.23■■□□□ 1.31
PCMT1-209ENST00000494411 SAGE1Q9NXZ1 904 aa23.23■■□□□ 1.31
PCMT1-209ENST00000494411 CASP8AP2Q9UKL3 1982 aa23.23■■□□□ 1.31
PCMT1-209ENST00000494411 NPM3O75607 178 aaKnown RBP23.22■■□□□ 1.31
PCMT1-209ENST00000494411 TM4SF4P48230 202 aa23.22■■□□□ 1.31
PCMT1-209ENST00000494411 PPP4CP60510 307 aa23.22■■□□□ 1.31
PCMT1-209ENST00000494411 EDC3Q96F86 508 aaKnown RBP23.22■■□□□ 1.31
PCMT1-209ENST00000494411 BOLA2Q9H3K6 86 aa23.22■■□□□ 1.31
PCMT1-209ENST00000494411 SUPT16HQ9Y5B9 1047 aaKnown RBP23.22■■□□□ 1.31
PCMT1-209ENST00000494411 SNCAIPQ9Y6H5 919 aa23.22■■□□□ 1.31
PCMT1-209ENST00000494411 PLCG2P16885 1265 aa23.21■■□□□ 1.31
PCMT1-209ENST00000494411 INPP5BP32019 993 aa23.21■■□□□ 1.31
PCMT1-209ENST00000494411 MIGA1Q8NAN2 632 aa23.21■■□□□ 1.31
PCMT1-209ENST00000494411 COL2A1P02458 1487 aaPredicted RBP23.21■■□□□ 1.31
PCMT1-209ENST00000494411 MYH7P12883 1935 aa23.21■■□□□ 1.31
PCMT1-209ENST00000494411 MANSC4A6NHS7 340 aaPredicted RBP23.2■■□□□ 1.3
PCMT1-209ENST00000494411 DYNLL1P63167 89 aaKnown RBP23.2■■□□□ 1.3
PCMT1-209ENST00000494411 OSBPL5Q9H0X9 879 aaPredicted RBP23.2■■□□□ 1.3
PCMT1-209ENST00000494411 PAG1Q9NWQ8 432 aa23.2■■□□□ 1.3
PCMT1-209ENST00000494411 ZNF112Q9UJU3 913 aa23.2■■□□□ 1.3
PCMT1-209ENST00000494411 SPDYE5A6NIY4 337 aa23.19■■□□□ 1.3
PCMT1-209ENST00000494411 SLURP2P0DP57 97 aa23.19■■□□□ 1.3
PCMT1-209ENST00000494411 EXOC6Q8TAG9 804 aa23.19■■□□□ 1.3
PCMT1-209ENST00000494411 OTUD5Q96G74 571 aa23.19■■□□□ 1.3
PCMT1-209ENST00000494411 HAUS7Q99871 368 aa23.19■■□□□ 1.3
PCMT1-209ENST00000494411 SIPA1L1O43166 1804 aa23.18■■□□□ 1.3
PCMT1-209ENST00000494411 PDE6AP16499 860 aa23.18■■□□□ 1.3
PCMT1-209ENST00000494411 AAMPQ13685 434 aa23.18■■□□□ 1.3
PCMT1-209ENST00000494411 TMED8Q6PL24 325 aaPredicted RBP23.18■■□□□ 1.3
PCMT1-209ENST00000494411 MAPKAPK5Q8IW41 473 aa23.18■■□□□ 1.3
PCMT1-209ENST00000494411 TGFBRAP1Q8WUH2 860 aa23.18■■□□□ 1.3
PCMT1-209ENST00000494411 ECHDC1Q9NTX5 307 aa23.18■■□□□ 1.3
PCMT1-209ENST00000494411 FLT1P17948 1338 aa23.17■■□□□ 1.3
PCMT1-209ENST00000494411 HDAC1Q13547 482 aaPredicted RBP23.17■■□□□ 1.3
PCMT1-209ENST00000494411 SLC9C2Q5TAH2 1124 aa23.17■■□□□ 1.3
PCMT1-209ENST00000494411 ERO1BQ86YB8 467 aa23.17■■□□□ 1.3
PCMT1-209ENST00000494411 MYH1P12882 1939 aa23.17■■□□□ 1.3
PCMT1-209ENST00000494411 DOCK1Q14185 1865 aa23.17■■□□□ 1.3
PCMT1-209ENST00000494411 PHF20L1A8MW92 1017 aa23.16■■□□□ 1.3
PCMT1-209ENST00000494411 INHBEP58166 350 aa23.16■■□□□ 1.3
PCMT1-209ENST00000494411 MAP3K10Q02779 954 aa23.16■■□□□ 1.3
PCMT1-209ENST00000494411 TSHZ3Q63HK5 1081 aa23.16■■□□□ 1.3
PCMT1-209ENST00000494411 GPATCH3Q96I76 525 aa23.16■■□□□ 1.3
PCMT1-209ENST00000494411 ZNF532Q9HCE3 1301 aa23.15■■□□□ 1.3
PCMT1-209ENST00000494411 IGF2BP3O00425 579 aaKnown RBP eCLIP23.15■■□□□ 1.3
PCMT1-209ENST00000494411 NOL9Q5SY16 702 aaKnown RBP23.15■■□□□ 1.3
PCMT1-209ENST00000494411 IFNL1Q8IU54 200 aa23.15■■□□□ 1.3
PCMT1-209ENST00000494411 MS4A4AQ96JQ5 239 aa23.15■■□□□ 1.3
PCMT1-209ENST00000494411 NAV1Q8NEY1 1877 aa23.14■■□□□ 1.29
PCMT1-209ENST00000494411 TCRBV5S4A2TA0A5A2 114 aa23.14■■□□□ 1.29
PCMT1-209ENST00000494411 FAM196BA6NMK8 535 aa23.14■■□□□ 1.29
PCMT1-209ENST00000494411 PPIL2Q13356 520 aa23.14■■□□□ 1.29
PCMT1-209ENST00000494411 CERS3Q8IU89 383 aa23.14■■□□□ 1.29
PCMT1-209ENST00000494411 OTUD7AQ8TE49 926 aaPredicted RBP23.14■■□□□ 1.29
PCMT1-209ENST00000494411 ATAD5Q96QE3 1844 aa23.13■■□□□ 1.29
PCMT1-209ENST00000494411 TESPA1A2RU30 521 aaPredicted RBP23.13■■□□□ 1.29
PCMT1-209ENST00000494411 IRF6O14896 467 aa23.13■■□□□ 1.29
PCMT1-209ENST00000494411 TBC1D12O60347 775 aa23.13■■□□□ 1.29
PCMT1-209ENST00000494411 TBC1D8O95759 1140 aa23.13■■□□□ 1.29
PCMT1-209ENST00000494411 GTF2A2P52657 109 aa23.13■■□□□ 1.29
PCMT1-209ENST00000494411 BRI3BPQ8WY22 251 aa23.13■■□□□ 1.29
PCMT1-209ENST00000494411 GCC1Q96CN9 775 aa23.13■■□□□ 1.29
PCMT1-209ENST00000494411 RIOK1Q9BRS2 568 aaKnown RBP23.13■■□□□ 1.29
PCMT1-209ENST00000494411 SAP30BPQ9UHR5 308 aaKnown RBP23.13■■□□□ 1.29
PCMT1-209ENST00000494411 CCL15-CCL14A0A0B4J2E2 113 aa23.12■■□□□ 1.29
PCMT1-209ENST00000494411 MAGEB6P1A0A0J9YX57 407 aa23.12■■□□□ 1.29
PCMT1-209ENST00000494411 PPATQ06203 517 aa23.12■■□□□ 1.29
PCMT1-209ENST00000494411 CCL15Q16663 113 aa23.12■■□□□ 1.29
PCMT1-209ENST00000494411 DDX60LQ5H9U9 1706 aaKnown RBP23.12■■□□□ 1.29
PCMT1-209ENST00000494411 SCYL3Q8IZE3 742 aa23.12■■□□□ 1.29
PCMT1-209ENST00000494411 PTPN18Q99952 460 aa23.12■■□□□ 1.29
PCMT1-209ENST00000494411 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.12■■□□□ 1.29
PCMT1-209ENST00000494411 DHX36Q9H2U1 1008 aaKnown RBP23.12■■□□□ 1.29
PCMT1-209ENST00000494411 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.12■■□□□ 1.29
PCMT1-209ENST00000494411 PALD1Q9ULE6 856 aa23.12■■□□□ 1.29
PCMT1-209ENST00000494411 PHIPQ8WWQ0 1821 aa23.11■■□□□ 1.29
PCMT1-209ENST00000494411 ALDH1A1P00352 501 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms