RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 GPR75-ASB3A0A0A6YYF3 556 aa12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 TESPA1A2RU30 521 aaPredicted RBP12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 BTDP43251 543 aa12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 TBC1D9Q6ZT07 1266 aa12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 NSUN4Q96CB9 384 aaKnown RBP12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 LNPKQ9C0E8 428 aa12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 IL1RAPL2Q9NP60 686 aa12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 RAI14Q9P0K7 980 aa12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 LRP2BPQ9P2M1 347 aa12.87□□□□□ -0.35
SCAMP4-208ENST00000489554 RFX7Q2KHR2 1363 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 SPDYE5A6NIY4 337 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 GPR25O00155 361 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 RGS3P49796 1198 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 GTF2A2P52657 109 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 MIGA2Q7L4E1 593 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 CTU1Q7Z7A3 348 aaKnown RBP12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 ERO1BQ86YB8 467 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 ZNF384Q8TF68 577 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 ZNF296Q8WUU4 475 aaPredicted RBP12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 TLR7Q9NYK1 1049 aaKnown RBP12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 DBNLQ9UJU6 430 aaKnown RBP12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 SNCAIPQ9Y6H5 919 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 OTOFQ9HC10 1997 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 CASP8AP2Q9UKL3 1982 aa12.86□□□□□ -0.35
SCAMP4-208ENST00000489554 LAMB1P07942 1786 aa12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 IGF2BP3O00425 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 WDHD1O75717 1129 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 ZKSCAN4Q969J2 545 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 NOL10Q9BSC4 688 aaKnown RBP12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 CCDC8Q9H0W5 538 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 SNRKQ9NRH2 765 aa12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 ZNF112Q9UJU3 913 aa12.85□□□□□ -0.35
SCAMP4-208ENST00000489554 MYH2Q9UKX2 1941 aa12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 FKTNO75072 461 aa12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 RHBDL3P58872 404 aa12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 PPATQ06203 517 aa12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 PPIL2Q13356 520 aa12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 AACSQ86V21 672 aa12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 ZSCAN29Q8IWY8 852 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 ZFPM1Q8IX07 1006 aa12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
SCAMP4-208ENST00000489554 ATRNL1Q5VV63 1379 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 CCL15-CCL14A0A0B4J2E2 113 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 BAG3O95817 575 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 CETPP11597 493 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 PLCG2P16885 1265 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 INPP5BP32019 993 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 ZAP70P43403 619 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 SNAPC2Q13487 334 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 PICALMQ13492 652 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 PKN2Q16513 984 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 CCL15Q16663 113 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 NOL9Q5SY16 702 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 PLEKHM2Q8IWE5 1019 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 CLASRPQ8N2M8 674 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 BRI3BPQ8WY22 251 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 PTPN18Q99952 460 aa12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-208ENST00000489554 CCDC85CA6NKD9 419 aa12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 IRF6O14896 467 aa12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 MAP3K10Q02779 954 aa12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 CRHR2Q13324 411 aa12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 TMED8Q6PL24 325 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 R3HDMLQ9H3Y0 253 aa12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 ZCCHC17Q9NP64 241 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 STAP2Q9UGK3 403 aa12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 COL2A1P02458 1487 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-208ENST00000489554 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
SCAMP4-208ENST00000489554 PPP4CP60510 307 aa12.81□□□□□ -0.36
SCAMP4-208ENST00000489554 TEX11Q8IYF3 940 aa12.81□□□□□ -0.36
SCAMP4-208ENST00000489554 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
SCAMP4-208ENST00000489554 PIH1D3Q9NQM4 214 aaKnown RBP12.81□□□□□ -0.36
SCAMP4-208ENST00000489554 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
SCAMP4-208ENST00000489554 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 TBC1D12O60347 775 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 IDH1O75874 414 aaKnown RBP12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 PDE1AP54750 535 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 TAF1CQ15572 869 aaPredicted RBP12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 TSHZ3Q63HK5 1081 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 CERS3Q8IU89 383 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 SCYL3Q8IZE3 742 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 PI4K2BQ8TCG2 481 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 SH3RF3Q8TEJ3 882 aaPredicted RBP12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 ERO1AQ96HE7 468 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 OSBPL5Q9H0X9 879 aaPredicted RBP12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 ZFYVE28Q9HCC9 887 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 PICK1Q9NRD5 415 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.365e-6■■□□□ 11.7
SCAMP4-208ENST00000489554 KCNH4Q9UQ05 1017 aa12.8□□□□□ -0.36
SCAMP4-208ENST00000489554 DOCK2Q92608 1830 aa12.79□□□□□ -0.36
SCAMP4-208ENST00000489554 CTNND1O60716 968 aaKnown RBP12.79□□□□□ -0.36
SCAMP4-208ENST00000489554 MX1P20591 662 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms