RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 HAND2P61296 217 aa15.2■□□□□ 0.02
TOP3A-206ENST00000489131 MTMR14Q8NCE2 650 aa15.2■□□□□ 0.02
TOP3A-206ENST00000489131 JDP2Q8WYK2 163 aa15.2■□□□□ 0.02
TOP3A-206ENST00000489131 FBXW7Q969H0 707 aa15.2■□□□□ 0.02
TOP3A-206ENST00000489131 TMX3Q96JJ7 454 aa15.2■□□□□ 0.02
TOP3A-206ENST00000489131 ZSCAN31Q96LW9 406 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-206ENST00000489131 LIMCH1Q9UPQ0 1083 aa15.2■□□□□ 0.02
TOP3A-206ENST00000489131 COL2A1P02458 1487 aaPredicted RBP15.2■□□□□ 0.02
TOP3A-206ENST00000489131 CPA1P15085 419 aa15.19■□□□□ 0.02
TOP3A-206ENST00000489131 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
TOP3A-206ENST00000489131 MCM5P33992 734 aa15.19■□□□□ 0.02
TOP3A-206ENST00000489131 DDIT3P35638 169 aa15.19■□□□□ 0.02
TOP3A-206ENST00000489131 CXCL9Q07325 125 aa15.19■□□□□ 0.02
TOP3A-206ENST00000489131 TOB2Q14106 344 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-206ENST00000489131 C12orf60Q5U649 245 aa15.19■□□□□ 0.02
TOP3A-206ENST00000489131 KIAA0825Q8IV33 1275 aa15.19■□□□□ 0.02
TOP3A-206ENST00000489131 INTS4Q96HW7 963 aaKnown RBP15.19■□□□□ 0.02
TOP3A-206ENST00000489131 KRT23Q9C075 422 aa15.19■□□□□ 0.02
TOP3A-206ENST00000489131 SH2B1Q9NRF2 756 aaPredicted RBP15.19■□□□□ 0.02
TOP3A-206ENST00000489131 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.19■□□□□ 0.02
TOP3A-206ENST00000489131 FLT1P17948 1338 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 NEDD4P46934 1319 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 SBF1O95248 1867 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 USP17L12C9JPN9 530 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 USP17L21D6R901 530 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 ORC4O43929 436 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 WDHD1O75717 1129 aaPredicted RBP15.18■□□□□ 0.02
TOP3A-206ENST00000489131 TRDNQ13061 729 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 TNIP1Q15025 636 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 CIAPIN1Q6FI81 312 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 MFSD6Q6ZSS7 791 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 RALYLQ86SE5 291 aaKnown RBP15.18■□□□□ 0.02
TOP3A-206ENST00000489131 TEX11Q8IYF3 940 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 IDI2Q9BXS1 227 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 TACC3Q9Y6A5 838 aa15.18■□□□□ 0.02
TOP3A-206ENST00000489131 RAD17O75943 681 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 USP5P45974 858 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 SLC4A3P48751 1232 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 ANTXR2P58335 489 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 RASSF7Q02833 373 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 CDC42EP5Q6NZY7 148 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 TGFBRAP1Q8WUH2 860 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 ZBED3Q96IU2 234 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-206ENST00000489131 TMEM87BQ96K49 555 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 HDAC9Q9UKV0 1011 aa15.17■□□□□ 0.02
TOP3A-206ENST00000489131 MYH1P12882 1939 aa15.16■□□□□ 0.02
TOP3A-206ENST00000489131 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-206ENST00000489131 SLC3A2P08195 630 aaKnown RBP15.16■□□□□ 0.02
TOP3A-206ENST00000489131 LMNB1P20700 586 aa15.16■□□□□ 0.02
TOP3A-206ENST00000489131 SCNN1DP51172 638 aa15.16■□□□□ 0.02
TOP3A-206ENST00000489131 ZNF280AP59817 542 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-206ENST00000489131 CTDSPL2Q05D32 466 aa15.16■□□□□ 0.02
TOP3A-206ENST00000489131 DPF2Q92785 391 aa15.16■□□□□ 0.02
TOP3A-206ENST00000489131 MCM9Q9NXL9 1143 aa15.16■□□□□ 0.02
TOP3A-206ENST00000489131 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 PRC1O43663 620 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 USP17L8P0C7I0 530 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 FKBP1CQ5VVH2 108 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 Q6ZUG5 572 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 AMOTL1Q8IY63 956 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 USP40Q9NVE5 1235 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 TPCN1Q9ULQ1 816 aa15.15■□□□□ 0.02
TOP3A-206ENST00000489131 MINDY4BA8MYZ0 360 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 B4E1Z4 1266 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 LIFRP42702 1097 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 CFAP100Q494V2 611 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 SGMS1Q86VZ5 419 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 OGFOD1Q8N543 542 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 IGDCC4Q8TDY8 1250 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 ESR2Q92731 530 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 ZNF274Q96GC6 653 aaPredicted RBP15.14■□□□□ 0.01
TOP3A-206ENST00000489131 OSBPL5Q9H0X9 879 aaPredicted RBP15.14■□□□□ 0.01
TOP3A-206ENST00000489131 EHD4Q9H223 541 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 CWC22Q9HCG8 908 aaKnown RBP15.14■□□□□ 0.01
TOP3A-206ENST00000489131 ZSWIM5Q9P217 1185 aa15.14■□□□□ 0.01
TOP3A-206ENST00000489131 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
TOP3A-206ENST00000489131 NID2Q14112 1375 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 CYP2D7A0A087X1C5 515 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 SH2B2O14492 632 aaPredicted RBP15.13■□□□□ 0.01
TOP3A-206ENST00000489131 ENTPD3O75355 529 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 EIF6P56537 245 aaKnown RBP15.13■□□□□ 0.01
TOP3A-206ENST00000489131 GABPAQ06546 454 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 PDE4BQ07343 736 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 ME3Q16798 604 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 C16orf86Q6ZW13 317 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 NKX2-3Q8TAU0 364 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 TCEANC2Q96MN5 208 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 DDX4Q9NQI0 724 aaKnown RBP15.13■□□□□ 0.01
TOP3A-206ENST00000489131 ANGEL1Q9UNK9 670 aaKnown RBP15.13■□□□□ 0.01
TOP3A-206ENST00000489131 SIPA1L1O43166 1804 aa15.13■□□□□ 0.01
TOP3A-206ENST00000489131 GOLGB1Q14789 3259 aaKnown RBP15.12■□□□□ 0.01
TOP3A-206ENST00000489131 PFKFB2O60825 505 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 KDM4AO75164 1064 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 CYP2D6P10635 497 aa15.12■□□□□ 0.01
TOP3A-206ENST00000489131 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.01
TOP3A-206ENST00000489131 RCAN1P53805 252 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms