RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 MECOMQ03112 1051 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 TTC39AQ5SRH9 613 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
DDX56-212ENST00000485367 ZKSCAN4Q969J2 545 aaPredicted RBP12.99□□□□□ -0.33
DDX56-212ENST00000485367 DBNDD2Q9BQY9 259 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 ZNF341Q9BYN7 854 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 R3HDMLQ9H3Y0 253 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 SNRKQ9NRH2 765 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 RAI14Q9P0K7 980 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 FAM198AQ9UFP1 575 aa12.99□□□□□ -0.33
DDX56-212ENST00000485367 GPR25O00155 361 aa12.98□□□□□ -0.33
DDX56-212ENST00000485367 IGF2BP3O00425 579 aaKnown RBP eCLIP12.98□□□□□ -0.33
DDX56-212ENST00000485367 MCAMP43121 646 aa12.98□□□□□ -0.33
DDX56-212ENST00000485367 BTDP43251 543 aa12.98□□□□□ -0.33
DDX56-212ENST00000485367 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
DDX56-212ENST00000485367 ZFPM1Q8IX07 1006 aa12.98□□□□□ -0.33
DDX56-212ENST00000485367 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
DDX56-212ENST00000485367 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
DDX56-212ENST00000485367 COG6Q9Y2V7 657 aa12.98□□□□□ -0.33
DDX56-212ENST00000485367 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 OTUD7BQ6GQQ9 843 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 CTU1Q7Z7A3 348 aaKnown RBP12.97□□□□□ -0.33
DDX56-212ENST00000485367 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 LAMB1P07942 1786 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 LDHCP07864 332 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 GSTO1P78417 241 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 ZSCAN29Q8IWY8 852 aaPredicted RBP12.97□□□□□ -0.33
DDX56-212ENST00000485367 ZNF384Q8TF68 577 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 CFHR5Q9BXR6 569 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 CCDC8Q9H0W5 538 aaPredicted RBP12.97□□□□□ -0.33
DDX56-212ENST00000485367 LRP2BPQ9P2M1 347 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 EXOC6BQ9Y2D4 811 aa12.97□□□□□ -0.33
DDX56-212ENST00000485367 GPR75-ASB3A0A0A6YYF3 556 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 CCL15-CCL14A0A0B4J2E2 113 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 TESPA1A2RU30 521 aaPredicted RBP12.96□□□□□ -0.34
DDX56-212ENST00000485367 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 FKTNO75072 461 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 MRE11P49959 708 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 GTF2A2P52657 109 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 PICALMQ13492 652 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 CCL15Q16663 113 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 ERO1BQ86YB8 467 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 NSUN4Q96CB9 384 aaKnown RBP12.96□□□□□ -0.34
DDX56-212ENST00000485367 MS4A4AQ96JQ5 239 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 PTPN18Q99952 460 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 IDI2Q9BXS1 227 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 DDX19BQ9UMR2 479 aa12.96□□□□□ -0.34
DDX56-212ENST00000485367 ENTPD3O75355 529 aa12.95□□□□□ -0.34
DDX56-212ENST00000485367 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
DDX56-212ENST00000485367 INPP5BP32019 993 aa12.95□□□□□ -0.34
DDX56-212ENST00000485367 MCM4P33991 863 aa12.95□□□□□ -0.34
DDX56-212ENST00000485367 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
DDX56-212ENST00000485367 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
DDX56-212ENST00000485367 BRI3BPQ8WY22 251 aa12.95□□□□□ -0.34
DDX56-212ENST00000485367 EAF2Q96CJ1 260 aaPredicted RBP12.95□□□□□ -0.34
DDX56-212ENST00000485367 TBC1D2Q9BYX2 928 aa12.95□□□□□ -0.34
DDX56-212ENST00000485367 SLKQ9H2G2 1235 aaPredicted RBP12.95□□□□□ -0.34
DDX56-212ENST00000485367 TLR7Q9NYK1 1049 aaKnown RBP12.95□□□□□ -0.34
DDX56-212ENST00000485367 DBNLQ9UJU6 430 aaKnown RBP12.95□□□□□ -0.34
DDX56-212ENST00000485367 SEC24BO95487 1268 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 XRCC6P12956 609 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDX56-212ENST00000485367 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 DOCK2Q92608 1830 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 APBB1O00213 710 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 RHBDL3P58872 404 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 CRHR2Q13324 411 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 PPIL2Q13356 520 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 SH3BP5LQ7L8J4 393 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 AACSQ86V21 672 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 RPAP2Q8IXW5 612 aaPredicted RBP12.94□□□□□ -0.34
DDX56-212ENST00000485367 NOL10Q9BSC4 688 aaKnown RBP12.94□□□□□ -0.34
DDX56-212ENST00000485367 DDX4Q9NQI0 724 aaKnown RBP12.94□□□□□ -0.34
DDX56-212ENST00000485367 ZNF112Q9UJU3 913 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 RFX7Q2KHR2 1363 aa12.94□□□□□ -0.34
DDX56-212ENST00000485367 DDX11L8A8MPP1 907 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 IRF6O14896 467 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 HMMRO75330 724 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 CYP2E1P05181 493 aaPredicted RBP12.93□□□□□ -0.34
DDX56-212ENST00000485367 CETPP11597 493 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 ZAP70P43403 619 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 PPATQ06203 517 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 SNAPC2Q13487 334 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 HSP90AA2PQ14568 343 aaPredicted RBP12.93□□□□□ -0.34
DDX56-212ENST00000485367 HSP90AB4PQ58FF6 505 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 NAA16Q6N069 864 aaPredicted RBP12.93□□□□□ -0.34
DDX56-212ENST00000485367 ZNF512BQ96KM6 892 aaPredicted RBP12.93□□□□□ -0.34
DDX56-212ENST00000485367 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
DDX56-212ENST00000485367 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
DDX56-212ENST00000485367 IL1RAPL2Q9NP60 686 aa12.93□□□□□ -0.34
DDX56-212ENST00000485367 MYO5AQ9Y4I1 1855 aaKnown RBP12.93□□□□□ -0.34
DDX56-212ENST00000485367 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
DDX56-212ENST00000485367 PTMSP20962 102 aa12.92□□□□□ -0.34
DDX56-212ENST00000485367 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
DDX56-212ENST00000485367 TEX11Q8IYF3 940 aa12.92□□□□□ -0.34
DDX56-212ENST00000485367 PIH1D3Q9NQM4 214 aaKnown RBP12.92□□□□□ -0.34
DDX56-212ENST00000485367 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
DDX56-212ENST00000485367 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
DDX56-212ENST00000485367 SIRT2Q8IXJ6 389 aa12.92□□□□□ -0.34
DDX56-212ENST00000485367 RHPN1Q8TCX5 695 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms