RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 KLRG2A4D1S0 409 aaPredicted RBP7.29□□□□□ -1.24
PTPN4-210ENST00000485247 FAM177BA6PVY3 158 aa7.29□□□□□ -1.24
PTPN4-210ENST00000485247 ZNF157P51786 506 aaPredicted RBP7.29□□□□□ -1.24
PTPN4-210ENST00000485247 HIRAP54198 1017 aaPredicted RBP7.29□□□□□ -1.24
PTPN4-210ENST00000485247 SULT6B1Q6IMI4 303 aa7.29□□□□□ -1.24
PTPN4-210ENST00000485247 USP48Q86UV5 1035 aa7.29□□□□□ -1.24
PTPN4-210ENST00000485247 NIM1KQ8IY84 436 aa7.29□□□□□ -1.24
PTPN4-210ENST00000485247 CSRNP1Q96S65 589 aa7.29□□□□□ -1.24
PTPN4-210ENST00000485247 PGAP2Q9UHJ9 254 aa7.29□□□□□ -1.24
PTPN4-210ENST00000485247 DYRK1BQ9Y463 629 aa7.29□□□□□ -1.24
PTPN4-210ENST00000485247 SCN11AQ9UI33 1791 aa7.28□□□□□ -1.24
PTPN4-210ENST00000485247 RNMTO43148 476 aaKnown RBP7.28□□□□□ -1.24
PTPN4-210ENST00000485247 A1BGP04217 495 aa7.28□□□□□ -1.24
PTPN4-210ENST00000485247 IL6STP40189 918 aaPredicted RBP7.28□□□□□ -1.24
PTPN4-210ENST00000485247 GMPSP49915 693 aaPredicted RBP7.28□□□□□ -1.24
PTPN4-210ENST00000485247 GAS6Q14393 721 aa7.28□□□□□ -1.24
PTPN4-210ENST00000485247 DBN1Q16643 649 aa7.28□□□□□ -1.24
PTPN4-210ENST00000485247 MAP7D1Q3KQU3 841 aa7.28□□□□□ -1.24
PTPN4-210ENST00000485247 TTC5Q8N0Z6 440 aa7.28□□□□□ -1.24
PTPN4-210ENST00000485247 SNED1Q8TER0 1413 aa7.27□□□□□ -1.24
PTPN4-210ENST00000485247 TCERG1O14776 1098 aaKnown RBP7.27□□□□□ -1.25
PTPN4-210ENST00000485247 PPIP5K2O43314 1243 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 RAD21O60216 631 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 THBS1P07996 1170 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 CXCL9Q07325 125 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 FBXO46Q6PJ61 603 aaPredicted RBP7.27□□□□□ -1.25
PTPN4-210ENST00000485247 TPTE2Q6XPS3 522 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 TAS1R3Q7RTX0 852 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 SLC51AQ86UW1 340 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 TRIM22Q8IYM9 498 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 C2orf69Q8N8R5 385 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 TRPM4Q8TD43 1214 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 ZNF296Q8WUU4 475 aaPredicted RBP7.27□□□□□ -1.25
PTPN4-210ENST00000485247 CLUAP1Q96AJ1 413 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 ZNF496Q96IT1 587 aaPredicted RBP7.27□□□□□ -1.25
PTPN4-210ENST00000485247 BCL2L13Q9BXK5 485 aa7.27□□□□□ -1.25
PTPN4-210ENST00000485247 GBA2Q9HCG7 927 aaPredicted RBP7.27□□□□□ -1.25
PTPN4-210ENST00000485247 NPC1L1Q9UHC9 1359 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 SHTN1A0MZ66 631 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 TBC1D8O95759 1140 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 GTF2E1P29083 439 aaPredicted RBP7.26□□□□□ -1.25
PTPN4-210ENST00000485247 PHKA2P46019 1235 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 PIP4K2AP48426 406 aaPredicted RBP7.26□□□□□ -1.25
PTPN4-210ENST00000485247 AOC3Q16853 763 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 WDR44Q5JSH3 913 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 RIPOR1Q6ZS17 1223 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 ZSCAN10Q96SZ4 725 aaPredicted RBP7.26□□□□□ -1.25
PTPN4-210ENST00000485247 GAS2L1Q99501 681 aaPredicted RBP7.26□□□□□ -1.25
PTPN4-210ENST00000485247 TIMMDC1Q9NPL8 285 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 NIP7Q9Y221 180 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTPN4-210ENST00000485247 AKAP11Q9UKA4 1901 aa7.26□□□□□ -1.25
PTPN4-210ENST00000485247 MRC1P22897 1456 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 GPR25O00155 361 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 SKIP12755 728 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 GDF10P55107 478 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 TLR1Q15399 786 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 C4orf17Q53FE4 359 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 CDCA8Q53HL2 280 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 CLEC4GQ6UXB4 293 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 KRT26Q7Z3Y9 468 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 UCN2Q96RP3 112 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 TEX13AQ9BXU3 409 aaPredicted RBP7.25□□□□□ -1.25
PTPN4-210ENST00000485247 CNOT7Q9UIV1 285 aaKnown RBP7.25□□□□□ -1.25
PTPN4-210ENST00000485247 ZNRF3Q9ULT6 936 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 ZNF652Q9Y2D9 606 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 PCDHGA11Q9Y5H2 935 aa7.25□□□□□ -1.25
PTPN4-210ENST00000485247 HEG1Q9ULI3 1381 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 FAM181BA6NEQ2 426 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 TMEM229AB2RXF0 380 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 ADM5C9JUS6 153 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 RAD17O75943 681 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 INHAP05111 366 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 SLURP2P0DP57 97 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 WWC1Q8IX03 1113 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 WHAMMQ8TF30 809 aa7.24□□□□□ -1.25
PTPN4-210ENST00000485247 RPGRQ92834 1020 aaKnown RBP7.24□□□□□ -1.25
PTPN4-210ENST00000485247 H7C1D1 291 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 F11P03951 625 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 NCOA4Q13772 614 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 CRY2Q49AN0 593 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 ZNF385CQ66K41 422 aaPredicted RBP7.23□□□□□ -1.25
PTPN4-210ENST00000485247 TMEM214Q6NUQ4 689 aaKnown RBP7.23□□□□□ -1.25
PTPN4-210ENST00000485247 ZNF790Q6PG37 636 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 RASAL3Q86YV0 1011 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 DEPDC4Q8N2C3 294 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 GMCL1Q96IK5 515 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 CDHR2Q9BYE9 1310 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 UBR2Q8IWV8 1755 aa7.23□□□□□ -1.25
PTPN4-210ENST00000485247 USP17L5A8MUK1 530 aa7.22□□□□□ -1.25
PTPN4-210ENST00000485247 EGFRP00533 1210 aa7.22□□□□□ -1.25
PTPN4-210ENST00000485247 HMOX1P09601 288 aa7.22□□□□□ -1.25
PTPN4-210ENST00000485247 EN2P19622 333 aaPredicted RBP7.22□□□□□ -1.25
PTPN4-210ENST00000485247 TNIP1Q15025 636 aa7.22□□□□□ -1.25
PTPN4-210ENST00000485247 MTHFSDQ2M296 383 aaKnown RBP7.22□□□□□ -1.25
PTPN4-210ENST00000485247 EML3Q32P44 896 aa7.22□□□□□ -1.25
PTPN4-210ENST00000485247 TBC1D10BQ4KMP7 808 aaPredicted RBP7.22□□□□□ -1.25
PTPN4-210ENST00000485247 GNASQ5JWF2 1037 aa7.22□□□□□ -1.25
PTPN4-210ENST00000485247 ZNF295-AS1Q8N0V1 137 aa7.22□□□□□ -1.25
PTPN4-210ENST00000485247 RHBDD1Q8TEB9 315 aa7.22□□□□□ -1.25
PTPN4-210ENST00000485247 GTPBP3Q969Y2 492 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms