RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 TEX11Q8IYF3 940 aa14.87□□□□□ -0.03
PTPRF-213ENST00000481019 PI4K2BQ8TCG2 481 aa14.87□□□□□ -0.03
PTPRF-213ENST00000481019 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
PTPRF-213ENST00000481019 WBP1LQ9NX94 342 aa14.87□□□□□ -0.03
PTPRF-213ENST00000481019 AK9Q5TCS8 1911 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 FOXN1O15353 648 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 ENTPD3O75355 529 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 MAP3K12Q12852 859 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 B4GALNT3Q6L9W6 998 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 SMC5Q8IY18 1101 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.86□□□□□ -0.03
PTPRF-213ENST00000481019 CCDC102AQ96A19 550 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 GCC1Q96CN9 775 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 SIPA1L1O43166 1804 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 FOCADQ5VW36 1801 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 ZNF532Q9HCE3 1301 aa14.86□□□□□ -0.03
PTPRF-213ENST00000481019 MAP2K2P36507 400 aa14.85□□□□□ -0.03
PTPRF-213ENST00000481019 VGLL4Q14135 290 aa14.85□□□□□ -0.03
PTPRF-213ENST00000481019 TTF1Q15361 905 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-213ENST00000481019 SLC9C2Q5TAH2 1124 aa14.85□□□□□ -0.03
PTPRF-213ENST00000481019 MAPKAPK5Q8IW41 473 aa14.85□□□□□ -0.03
PTPRF-213ENST00000481019 TGFBRAP1Q8WUH2 860 aa14.85□□□□□ -0.03
PTPRF-213ENST00000481019 ZKSCAN4Q969J2 545 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-213ENST00000481019 CSRNP1Q96S65 589 aa14.85□□□□□ -0.03
PTPRF-213ENST00000481019 RIOK1Q9BRS2 568 aaKnown RBP14.85□□□□□ -0.03
PTPRF-213ENST00000481019 RWDD1Q9H446 243 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-213ENST00000481019 ELP3Q9H9T3 547 aa14.85□□□□□ -0.03
PTPRF-213ENST00000481019 FAM196BA6NMK8 535 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 INPP5BP32019 993 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 IREB2P48200 963 aaKnown RBP14.84□□□□□ -0.03
PTPRF-213ENST00000481019 NOGQ13253 232 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 SPRYD7Q5W111 196 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 WNK4Q96J92 1243 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 LNPKQ9C0E8 428 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 OSBPL5Q9H0X9 879 aaPredicted RBP14.84□□□□□ -0.03
PTPRF-213ENST00000481019 TSKSQ9UJT2 592 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 SNCAIPQ9Y6H5 919 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 MYH7P12883 1935 aa14.84□□□□□ -0.03
PTPRF-213ENST00000481019 PHF20L1A8MW92 1017 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
PTPRF-213ENST00000481019 BAG3O95817 575 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 MX1P20591 662 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 ADD2P35612 726 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 MAP3K9P80192 1104 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 EVX2Q03828 476 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 RRP1BQ14684 758 aaKnown RBP14.83□□□□□ -0.04
PTPRF-213ENST00000481019 SLC4A8Q2Y0W8 1093 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 ZSCAN29Q8IWY8 852 aaPredicted RBP14.83□□□□□ -0.04
PTPRF-213ENST00000481019 SLC10A4Q96EP9 437 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 WRNIP1Q96S55 665 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 SAP30BPQ9UHR5 308 aaKnown RBP14.83□□□□□ -0.04
PTPRF-213ENST00000481019 ZNF112Q9UJU3 913 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 FLT1P17948 1338 aa14.83□□□□□ -0.04
PTPRF-213ENST00000481019 MAP3K10Q02779 954 aa14.82□□□□□ -0.04
PTPRF-213ENST00000481019 NUCB1Q02818 461 aa14.82□□□□□ -0.04
PTPRF-213ENST00000481019 ANKRD13AQ8IZ07 590 aa14.82□□□□□ -0.04
PTPRF-213ENST00000481019 LCORLQ8N3X6 602 aa14.82□□□□□ -0.04
PTPRF-213ENST00000481019 NOL10Q9BSC4 688 aaKnown RBP14.82□□□□□ -0.04
PTPRF-213ENST00000481019 ZNF341Q9BYN7 854 aa14.82□□□□□ -0.04
PTPRF-213ENST00000481019 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.82□□□□□ -0.04
PTPRF-213ENST00000481019 TTC41PQ6P2S7 1318 aa14.82□□□□□ -0.04
PTPRF-213ENST00000481019 DDX60LQ5H9U9 1706 aaKnown RBP14.81□□□□□ -0.04
PTPRF-213ENST00000481019 LAMB1P07942 1786 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 MAGEB6P1A0A0J9YX57 407 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 PRKAB2O43741 272 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 IGSF3O75054 1194 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 HSPA8P11142 646 aaKnown RBP14.81□□□□□ -0.04
PTPRF-213ENST00000481019 PDE1AP54750 535 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 MAP2K1Q02750 393 aaPredicted RBP14.81□□□□□ -0.04
PTPRF-213ENST00000481019 CHD1LQ86WJ1 897 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 OPTNQ96CV9 577 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 GPATCH3Q96I76 525 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 ARMT1Q9H993 441 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 STAP2Q9UGK3 403 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 PALD1Q9ULE6 856 aa14.81□□□□□ -0.04
PTPRF-213ENST00000481019 COL2A1P02458 1487 aaPredicted RBP14.81□□□□□ -0.04
PTPRF-213ENST00000481019 PLCG2P16885 1265 aa14.8□□□□□ -0.04
PTPRF-213ENST00000481019 SHROOM1Q2M3G4 852 aaPredicted RBP14.8□□□□□ -0.04
PTPRF-213ENST00000481019 DCAF15Q66K64 600 aa14.8□□□□□ -0.04
PTPRF-213ENST00000481019 KBTBD3Q8NAB2 608 aa14.8□□□□□ -0.04
PTPRF-213ENST00000481019 PUS7LQ9H0K6 701 aaKnown RBP14.8□□□□□ -0.04
PTPRF-213ENST00000481019 DNAJC18Q9H819 358 aa14.8□□□□□ -0.04
PTPRF-213ENST00000481019 UNCXA6NJT0 531 aa14.79□□□□□ -0.04
PTPRF-213ENST00000481019 SMIM22K7EJ46 135 aa14.79□□□□□ -0.04
PTPRF-213ENST00000481019 GLRX3O76003 335 aaKnown RBP14.79□□□□□ -0.04
PTPRF-213ENST00000481019 MBD4O95243 580 aa14.79□□□□□ -0.04
PTPRF-213ENST00000481019 MYH1P12882 1939 aa14.79□□□□□ -0.04
PTPRF-213ENST00000481019 PDE4AP27815 886 aa14.79□□□□□ -0.04
PTPRF-213ENST00000481019 JAG1P78504 1218 aa14.79□□□□□ -0.04
PTPRF-213ENST00000481019 CCDC84Q86UT8 332 aaPredicted RBP14.79□□□□□ -0.04
PTPRF-213ENST00000481019 RNF186Q9NXI6 227 aa14.79□□□□□ -0.04
PTPRF-213ENST00000481019 NAV1Q8NEY1 1877 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 SPDYE5A6NIY4 337 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 USP5P45974 858 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 TM4SF4P48230 202 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 LBX1P52954 281 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 UBE3CQ15386 1083 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 CENPQQ7L2Z9 268 aaPredicted RBP14.78□□□□□ -0.04
PTPRF-213ENST00000481019 PLEKHM2Q8IWE5 1019 aa14.78□□□□□ -0.04
PTPRF-213ENST00000481019 SDR42E1Q8WUS8 393 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms