RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 C15orf52Q6ZUT6 534 aaKnown RBP17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 CHMP4CQ96CF2 233 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 KRT23Q9C075 422 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 SENP2Q9HC62 589 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 AATFQ9NY61 560 aaKnown RBP eCLIP17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 PIM2Q9P1W9 311 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 KIF3AQ9Y496 699 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 SALL1Q9NSC2 1324 aa17.08■□□□□ 0.32
PKNOX1-206ENST00000480179 LAMB1P07942 1786 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 FAM173BQ6P4H8 233 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 WDR66Q8TBY9 1149 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 TMEM87BQ96K49 555 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 BRIP1Q9BX63 1249 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 CYP2D7A0A087X1C5 515 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 ZSCAN23Q3MJ62 389 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 RNF41Q9H4P4 317 aaPredicted RBP17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 LY9Q9HBG7 655 aa17.07■□□□□ 0.32
PKNOX1-206ENST00000480179 KIF13BQ9NQT8 1826 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 SMIM22K7EJ46 135 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 RESTQ13127 1097 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 DALRD3Q5D0E6 543 aaKnown RBP17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 TBC1D16Q8TBP0 767 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 CRNKL1Q9BZJ0 848 aaKnown RBP17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 ZSWIM5Q9P217 1185 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 POLLQ9UGP5 575 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 DUOX1Q9NRD9 1551 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 CEP350Q5VT06 3117 aa17.06■□□□□ 0.32
PKNOX1-206ENST00000480179 KIF3CO14782 793 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 CPLX1O14810 134 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 ZBTB22O15209 634 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 DHX16O60231 1041 aaKnown RBP17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 NPR1P16066 1061 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 RXRAP19793 462 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 GRIK5Q16478 980 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 IGDCC4Q8TDY8 1250 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 TMEM63CQ9P1W3 806 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 MYH15Q9Y2K3 1946 aa17.05■□□□□ 0.32
PKNOX1-206ENST00000480179 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 KRT85P78386 507 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 APOA5Q6Q788 366 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 TMC4Q7Z404 712 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 ZKSCAN3Q9BRR0 538 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 SRGNP10124 158 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 FDPSP14324 419 aaKnown RBP17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 KCNA3P22001 575 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 GUCY1B3Q02153 619 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 CCDC144CPQ8IYA2 1237 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 MYL10Q9BUA6 226 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 ATP6V0A2Q9Y487 856 aa17.04■□□□□ 0.32
PKNOX1-206ENST00000480179 MYH2Q9UKX2 1941 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 GOLGA8AA7E2F4 631 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 ZBTB43O43298 467 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 TOMM70O94826 608 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 PDE6BP35913 854 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 DIXDC1Q155Q3 683 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 GIMAP6Q6P9H5 292 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 CTR9Q6PD62 1173 aa17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 ORC3Q9UBD5 711 aaPredicted RBP17.03■□□□□ 0.32
PKNOX1-206ENST00000480179 IL1R1P14778 569 aa17.02■□□□□ 0.32
PKNOX1-206ENST00000480179 UBE2HP62256 183 aa17.02■□□□□ 0.32
PKNOX1-206ENST00000480179 GSTO1P78417 241 aa17.02■□□□□ 0.32
PKNOX1-206ENST00000480179 SART3Q15020 963 aaKnown RBP17.02■□□□□ 0.32
PKNOX1-206ENST00000480179 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.32
PKNOX1-206ENST00000480179 OLFM4Q6UX06 510 aa17.02■□□□□ 0.32
PKNOX1-206ENST00000480179 NAV1Q8NEY1 1877 aa17.02■□□□□ 0.31
PKNOX1-206ENST00000480179 USP17L12C9JPN9 530 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 USP17L21D6R901 530 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 RIMBP2O15034 1052 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 CYP2D6P10635 497 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 LIFRP42702 1097 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 ZNF445P59923 1031 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 EVX2Q03828 476 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 WTAPQ15007 396 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 C9orf131Q5VYM1 1079 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 SGMS1Q86VZ5 419 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 ESR2Q92731 530 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 GRPEL1Q9HAV7 217 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 DCP1AQ9NPI6 582 aaPredicted RBP17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 ISY1Q9ULR0 285 aaKnown RBP17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 ERICH2A1L162 156 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 CDC27P30260 824 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 SH3RF3Q8TEJ3 882 aaPredicted RBP17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
PKNOX1-206ENST00000480179 UBAC1Q9BSL1 405 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms