RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 LCORLQ8N3X6 602 aa23.78■■□□□ 1.4
LIME1-205ENST00000480139 C2orf69Q8N8R5 385 aa23.78■■□□□ 1.4
LIME1-205ENST00000480139 RILPL2Q969X0 211 aa23.78■■□□□ 1.4
LIME1-205ENST00000480139 CRNKL1Q9BZJ0 848 aaKnown RBP23.78■■□□□ 1.4
LIME1-205ENST00000480139 PUS7LQ9H0K6 701 aaKnown RBP23.78■■□□□ 1.4
LIME1-205ENST00000480139 OSBPL5Q9H0X9 879 aaPredicted RBP23.78■■□□□ 1.4
LIME1-205ENST00000480139 NAV1Q8NEY1 1877 aa23.78■■□□□ 1.4
LIME1-205ENST00000480139 FLT1P17948 1338 aa23.78■■□□□ 1.4
LIME1-205ENST00000480139 MBD4O95243 580 aa23.77■■□□□ 1.4
LIME1-205ENST00000480139 CDAN1Q8IWY9 1227 aa23.77■■□□□ 1.4
LIME1-205ENST00000480139 ZFPM1Q8IX07 1006 aa23.77■■□□□ 1.4
LIME1-205ENST00000480139 TGFBRAP1Q8WUH2 860 aa23.77■■□□□ 1.4
LIME1-205ENST00000480139 OSBP2Q969R2 916 aa23.77■■□□□ 1.4
LIME1-205ENST00000480139 AIDAQ96BJ3 306 aa23.77■■□□□ 1.4
LIME1-205ENST00000480139 TLL2Q9Y6L7 1015 aa23.77■■□□□ 1.4
LIME1-205ENST00000480139 MYH1P12882 1939 aa23.76■■□□□ 1.39
LIME1-205ENST00000480139 ARMT1Q9H993 441 aa23.76■■□□□ 1.39
LIME1-205ENST00000480139 PPP1R12BO60237 982 aaPredicted RBP23.75■■□□□ 1.39
LIME1-205ENST00000480139 MAP3K11Q16584 847 aa23.75■■□□□ 1.39
LIME1-205ENST00000480139 SH3BP5LQ7L8J4 393 aa23.75■■□□□ 1.39
LIME1-205ENST00000480139 SAPCD2Q86UD0 394 aa23.75■■□□□ 1.39
LIME1-205ENST00000480139 DHX36Q9H2U1 1008 aaKnown RBP23.75■■□□□ 1.39
LIME1-205ENST00000480139 HIP1O00291 1037 aa23.74■■□□□ 1.39
LIME1-205ENST00000480139 SDSP20132 328 aa23.74■■□□□ 1.39
LIME1-205ENST00000480139 USP5P45974 858 aa23.74■■□□□ 1.39
LIME1-205ENST00000480139 MAPKAPK5Q8IW41 473 aa23.74■■□□□ 1.39
LIME1-205ENST00000480139 HHIPL1Q96JK4 782 aa23.74■■□□□ 1.39
LIME1-205ENST00000480139 CSRNP1Q96S65 589 aa23.74■■□□□ 1.39
LIME1-205ENST00000480139 STRBPQ96SI9 672 aaKnown RBP23.74■■□□□ 1.39
LIME1-205ENST00000480139 HELLSQ9NRZ9 838 aa23.74■■□□□ 1.39
LIME1-205ENST00000480139 MKRN1Q9UHC7 482 aaKnown RBP23.74■■□□□ 1.39
LIME1-205ENST00000480139 SIPA1L1O43166 1804 aa23.73■■□□□ 1.39
LIME1-205ENST00000480139 DDTLA6NHG4 134 aaPredicted RBP23.73■■□□□ 1.39
LIME1-205ENST00000480139 UNCXA6NJT0 531 aa23.73■■□□□ 1.39
LIME1-205ENST00000480139 DCAF15Q66K64 600 aa23.73■■□□□ 1.39
LIME1-205ENST00000480139 ARMC9Q7Z3E5 817 aa23.73■■□□□ 1.39
LIME1-205ENST00000480139 ZSCAN29Q8IWY8 852 aaPredicted RBP23.73■■□□□ 1.39
LIME1-205ENST00000480139 ATP8A2Q9NTI2 1148 aa23.73■■□□□ 1.39
LIME1-205ENST00000480139 OTOFQ9HC10 1997 aa23.72■■□□□ 1.39
LIME1-205ENST00000480139 RASSF10A6NK89 507 aa23.72■■□□□ 1.39
LIME1-205ENST00000480139 M0R2C6 588 aa23.72■■□□□ 1.39
LIME1-205ENST00000480139 GPAA1O43292 621 aa23.72■■□□□ 1.39
LIME1-205ENST00000480139 GNAT2P19087 354 aa23.72■■□□□ 1.39
LIME1-205ENST00000480139 MAP3K10Q02779 954 aa23.72■■□□□ 1.39
LIME1-205ENST00000480139 ABT1Q9ULW3 272 aaKnown RBP23.72■■□□□ 1.39
LIME1-205ENST00000480139 BMP2KLQ5H9B9 411 aa23.71■■□□□ 1.39
LIME1-205ENST00000480139 SKAP1Q86WV1 359 aa23.71■■□□□ 1.39
LIME1-205ENST00000480139 SEC62Q99442 399 aaKnown RBP23.71■■□□□ 1.39
LIME1-205ENST00000480139 DCP1AQ9NPI6 582 aaPredicted RBP23.71■■□□□ 1.39
LIME1-205ENST00000480139 TBC1D12O60347 775 aa23.7■■□□□ 1.38
LIME1-205ENST00000480139 USP2O75604 605 aaPredicted RBP23.7■■□□□ 1.38
LIME1-205ENST00000480139 IREB2P48200 963 aaKnown RBP23.7■■□□□ 1.38
LIME1-205ENST00000480139 HUNKP57058 714 aa23.7■■□□□ 1.38
LIME1-205ENST00000480139 TTLL12Q14166 644 aaPredicted RBP23.7■■□□□ 1.38
LIME1-205ENST00000480139 LDLRAD1Q5T700 205 aa23.7■■□□□ 1.38
LIME1-205ENST00000480139 GIMAP6Q6P9H5 292 aa23.7■■□□□ 1.38
LIME1-205ENST00000480139 SDR42E1Q8WUS8 393 aa23.7■■□□□ 1.38
LIME1-205ENST00000480139 PI4KBQ9UBF8 816 aa23.7■■□□□ 1.38
LIME1-205ENST00000480139 ANGEL1Q9UNK9 670 aaKnown RBP23.7■■□□□ 1.38
LIME1-205ENST00000480139 SLC4A4Q9Y6R1 1079 aa23.7■■□□□ 1.38
LIME1-205ENST00000480139 A0A0D9SFI3 127 aa23.69■■□□□ 1.38
LIME1-205ENST00000480139 NMIQ13287 307 aaPredicted RBP23.69■■□□□ 1.38
LIME1-205ENST00000480139 MCMDC2Q4G0Z9 681 aa23.69■■□□□ 1.38
LIME1-205ENST00000480139 FAM227BQ96M60 508 aa23.69■■□□□ 1.38
LIME1-205ENST00000480139 ZNF341Q9BYN7 854 aa23.69■■□□□ 1.38
LIME1-205ENST00000480139 DIAPH3Q9NSV4 1193 aa23.69■■□□□ 1.38
LIME1-205ENST00000480139 BAZ2AQ9UIF9 1905 aaKnown RBP23.69■■□□□ 1.38
LIME1-205ENST00000480139 PRKAB2O43741 272 aa23.68■■□□□ 1.38
LIME1-205ENST00000480139 HLA-DOAP06340 250 aa23.68■■□□□ 1.38
LIME1-205ENST00000480139 PRKG1Q13976 671 aa23.68■■□□□ 1.38
LIME1-205ENST00000480139 MOB2Q70IA6 237 aa23.68■■□□□ 1.38
LIME1-205ENST00000480139 METTL16Q86W50 562 aaKnown RBP23.68■■□□□ 1.38
LIME1-205ENST00000480139 KLRG1Q96E93 195 aa23.68■■□□□ 1.38
LIME1-205ENST00000480139 DDRGK1Q96HY6 314 aa23.68■■□□□ 1.38
LIME1-205ENST00000480139 HERC5Q9UII4 1024 aaKnown RBP23.68■■□□□ 1.38
LIME1-205ENST00000480139 PALD1Q9ULE6 856 aa23.68■■□□□ 1.38
LIME1-205ENST00000480139 UBE2Q2LH0YL09 131 aa23.67■■□□□ 1.38
LIME1-205ENST00000480139 HTRA3P83110 453 aa23.67■■□□□ 1.38
LIME1-205ENST00000480139 TTC6Q86TZ1 520 aa23.67■■□□□ 1.38
LIME1-205ENST00000480139 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.67■■□□□ 1.381e-7■□□□□ 8.6
LIME1-205ENST00000480139 EHD4Q9H223 541 aa23.67■■□□□ 1.38
LIME1-205ENST00000480139 SAP30BPQ9UHR5 308 aaKnown RBP23.67■■□□□ 1.38
LIME1-205ENST00000480139 ZNF112Q9UJU3 913 aa23.67■■□□□ 1.38
LIME1-205ENST00000480139 TAOK2Q9UL54 1235 aa23.67■■□□□ 1.38
LIME1-205ENST00000480139 FZD1Q9UP38 647 aa23.67■■□□□ 1.38
LIME1-205ENST00000480139 LAMB1P07942 1786 aa23.66■■□□□ 1.38
LIME1-205ENST00000480139 GSG1L2A8MUP6 293 aa23.66■■□□□ 1.38
LIME1-205ENST00000480139 PATL2C9JE40 543 aaKnown RBP23.66■■□□□ 1.38
LIME1-205ENST00000480139 MFAP1P55081 439 aaKnown RBP23.66■■□□□ 1.38
LIME1-205ENST00000480139 DEFB115Q30KQ5 88 aa23.66■■□□□ 1.38
LIME1-205ENST00000480139 MIGA2Q7L4E1 593 aa23.66■■□□□ 1.38
LIME1-205ENST00000480139 FOXP4Q8IVH2 680 aaPredicted RBP23.66■■□□□ 1.38
LIME1-205ENST00000480139 ANKRD13AQ8IZ07 590 aa23.66■■□□□ 1.38
LIME1-205ENST00000480139 MCM9Q9NXL9 1143 aa23.66■■□□□ 1.38
LIME1-205ENST00000480139 RGMBQ6NW40 437 aa23.65■■□□□ 1.38
LIME1-205ENST00000480139 CCDC171Q6TFL3 1326 aa23.64■■□□□ 1.38
LIME1-205ENST00000480139 RAD50Q92878 1312 aa23.64■■□□□ 1.38
LIME1-205ENST00000480139 THSD7BQ9C0I4 1608 aa23.64■■□□□ 1.38
LIME1-205ENST00000480139 MAP3K9P80192 1104 aa23.64■■□□□ 1.37
LIME1-205ENST00000480139 CWC27Q6UX04 472 aaKnown RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms