RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ARMC2Q8NEN0 867 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 COG3Q96JB2 828 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 RPGRIP1Q96KN7 1286 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 EHD4Q9H223 541 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 CLIC4Q9Y696 253 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 DLC1Q96QB1 1528 aa15.68■□□□□ 0.1
HDAC1-206ENST00000476391 TAF5LO75529 589 aa15.67■□□□□ 0.1
HDAC1-206ENST00000476391 HMGB1P09429 215 aaKnown RBP15.67■□□□□ 0.1
HDAC1-206ENST00000476391 EZRP15311 586 aaKnown RBP15.67■□□□□ 0.1
HDAC1-206ENST00000476391 DRP2Q13474 957 aa15.67■□□□□ 0.1
HDAC1-206ENST00000476391 ZNF483Q8TF39 744 aaPredicted RBP15.67■□□□□ 0.1
HDAC1-206ENST00000476391 SH3GL3Q99963 347 aa15.67■□□□□ 0.1
HDAC1-206ENST00000476391 GGA2Q9UJY4 613 aa15.67■□□□□ 0.1
HDAC1-206ENST00000476391 ZNF18P17022 549 aa15.67■□□□□ 0.1
HDAC1-206ENST00000476391 SYKP43405 635 aa15.67■□□□□ 0.1
HDAC1-206ENST00000476391 CLNS1AP54105 237 aaKnown RBP15.67■□□□□ 0.1
HDAC1-206ENST00000476391 SLC8A3P57103 927 aa15.67■□□□□ 0.1
HDAC1-206ENST00000476391 NME9Q86XW9 330 aa15.67■□□□□ 0.1
HDAC1-206ENST00000476391 SEMA3FQ13275 785 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 EIF4A2Q14240 407 aaKnown RBP15.66■□□□□ 0.1
HDAC1-206ENST00000476391 AP1ARQ63HQ0 302 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 TATDN2Q93075 761 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 SELENOOQ9BVL4 669 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 ATP6V0A4Q9HBG4 840 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 SPATS2LQ9NUQ6 558 aaKnown RBP15.66■□□□□ 0.1
HDAC1-206ENST00000476391 SH3BP1Q9Y3L3 701 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 CARMIL3Q8ND23 1372 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 CEP170BQ9Y4F5 1589 aaPredicted RBP15.66■□□□□ 0.1
HDAC1-206ENST00000476391 TFRCP02786 760 aaKnown RBP15.66■□□□□ 0.1
HDAC1-206ENST00000476391 SNCBQ16143 134 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 FAM43BQ6ZT52 329 aaPredicted RBP15.66■□□□□ 0.1
HDAC1-206ENST00000476391 FSD1Q9BTV5 496 aa15.66■□□□□ 0.1
HDAC1-206ENST00000476391 DDX20Q9UHI6 824 aaKnown RBP15.66■□□□□ 0.1
HDAC1-206ENST00000476391 OPA1O60313 960 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 EPB41P11171 864 aaKnown RBP15.65■□□□□ 0.1
HDAC1-206ENST00000476391 NR1I3Q14994 352 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 TLDC1Q6P9B6 456 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 BRAPQ7Z569 592 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 CALR3Q96L12 384 aaKnown RBP15.65■□□□□ 0.1
HDAC1-206ENST00000476391 HOOK1Q9UJC3 728 aaKnown RBP15.65■□□□□ 0.1
HDAC1-206ENST00000476391 CCNHP51946 323 aaPredicted RBP15.65■□□□□ 0.1
HDAC1-206ENST00000476391 GUCY1B3Q02153 619 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 NCAPH2Q6IBW4 605 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 RCSD1Q6JBY9 416 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 ZNF589Q86UQ0 364 aaPredicted RBP15.65■□□□□ 0.1
HDAC1-206ENST00000476391 ITFG2Q969R8 447 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 CDC5LQ99459 802 aaKnown RBP15.65■□□□□ 0.1
HDAC1-206ENST00000476391 ETAA1Q9NY74 926 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 HPSEQ9Y251 543 aa15.65■□□□□ 0.1
HDAC1-206ENST00000476391 A0A0U1RQJ8 604 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 NBPF14Q5TI25 921 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 CCNI2Q6ZMN8 369 aaPredicted RBP15.64■□□□□ 0.09
HDAC1-206ENST00000476391 POGZQ7Z3K3 1410 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 NUTM2AQ8IVF1 878 aaPredicted RBP15.64■□□□□ 0.09
HDAC1-206ENST00000476391 CCDC13Q8IYE1 715 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 ATRIPQ8WXE1 791 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 AGXT2Q9BYV1 514 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 U3KPZ7 1027 aaPredicted RBP15.64■□□□□ 0.09
HDAC1-206ENST00000476391 RGPD1P0DJD0 1748 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 NBPF7P0C2Y1 421 aaPredicted RBP15.64■□□□□ 0.09
HDAC1-206ENST00000476391 FECHP22830 423 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 SLC8A1P32418 973 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 MYSM1Q5VVJ2 828 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 TRAPPC11Q7Z392 1133 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 AACSQ86V21 672 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 MAB21L3Q8N8X9 362 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 ENOX1Q8TC92 643 aaKnown RBP15.64■□□□□ 0.09
HDAC1-206ENST00000476391 CCDC51Q96ER9 411 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 SLC40A1Q9NP59 571 aa15.64■□□□□ 0.09
HDAC1-206ENST00000476391 FAM237AA0A1B0GTK4 181 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 NAP1L1P55209 391 aaKnown RBP15.63■□□□□ 0.09
HDAC1-206ENST00000476391 ATP2B2Q01814 1243 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 SYNE3Q6ZMZ3 975 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 DHX32Q7L7V1 743 aaKnown RBP15.63■□□□□ 0.09
HDAC1-206ENST00000476391 PPFIBP1Q86W92 1011 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 CEP57Q86XR8 500 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 NBPF3Q9H094 633 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 RABEP2Q9H5N1 569 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 ACTR5Q9H9F9 607 aaPredicted RBP15.63■□□□□ 0.09
HDAC1-206ENST00000476391 BATF3Q9NR55 127 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 DACH1Q9UI36 760 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 FAM184BQ9ULE4 1060 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 NFE2L3Q9Y4A8 694 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 NCAPD2Q15021 1401 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 A0A1B0GTH6 734 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 GOLGA6L7A0A1B0GV03 622 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 PNOCQ13519 176 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 ANO1Q5XXA6 986 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 PARP9Q8IXQ6 854 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 SEC62Q99442 399 aaKnown RBP15.63■□□□□ 0.09
HDAC1-206ENST00000476391 LAMA4Q16363 1823 aa15.63■□□□□ 0.09
HDAC1-206ENST00000476391 MROH7-TTC4A0A0A0MT08 1334 aa15.62■□□□□ 0.09
HDAC1-206ENST00000476391 RWDD2BP57060 319 aa15.62■□□□□ 0.09
HDAC1-206ENST00000476391 UBE3BQ7Z3V4 1068 aa15.62■□□□□ 0.09
HDAC1-206ENST00000476391 ELOA2Q8IYF1 753 aaPredicted RBP15.62■□□□□ 0.09
HDAC1-206ENST00000476391 TEX13AQ9BXU3 409 aaPredicted RBP15.62■□□□□ 0.09
HDAC1-206ENST00000476391 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
HDAC1-206ENST00000476391 CKAP4Q07065 602 aaKnown RBP15.62■□□□□ 0.09
HDAC1-206ENST00000476391 FAM210AQ96ND0 272 aa15.62■□□□□ 0.09
HDAC1-206ENST00000476391 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms