RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
TPR-205ENST00000474852 SLC9C2Q5TAH2 1124 aa18.73■□□□□ 0.59
TPR-205ENST00000474852 CC2D1AQ6P1N0 951 aaPredicted RBP18.73■□□□□ 0.59
TPR-205ENST00000474852 DHX58Q96C10 678 aa18.73■□□□□ 0.59
TPR-205ENST00000474852 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
TPR-205ENST00000474852 SLC26A6Q9BXS9 759 aa18.73■□□□□ 0.59
TPR-205ENST00000474852 CPDO75976 1380 aa18.72■□□□□ 0.59
TPR-205ENST00000474852 CIAO1O76071 339 aa18.72■□□□□ 0.59
TPR-205ENST00000474852 TC2NQ8N9U0 490 aa18.72■□□□□ 0.59
TPR-205ENST00000474852 CCDC191Q8NCU4 936 aa18.72■□□□□ 0.59
TPR-205ENST00000474852 SMARCE1Q969G3 411 aa18.72■□□□□ 0.59
TPR-205ENST00000474852 CPLX2Q6PUV4 134 aaKnown RBP18.72■□□□□ 0.59
TPR-205ENST00000474852 CCDC12Q8WUD4 166 aaPredicted RBP18.72■□□□□ 0.59
TPR-205ENST00000474852 MPHOSPH8Q99549 860 aa18.72■□□□□ 0.59
TPR-205ENST00000474852 GOLGA8AA7E2F4 631 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 SH2B2O14492 632 aaPredicted RBP18.71■□□□□ 0.59
TPR-205ENST00000474852 ZBTB43O43298 467 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.71■□□□□ 0.59
TPR-205ENST00000474852 PARD6BQ9BYG5 372 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 LZTFL1Q9NQ48 299 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 SAMSN1Q9NSI8 373 aaKnown RBP18.71■□□□□ 0.59
TPR-205ENST00000474852 POLR2DO15514 142 aaKnown RBP18.71■□□□□ 0.59
TPR-205ENST00000474852 CDKL5O76039 1030 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 MCAMP43121 646 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 SMC1AQ14683 1233 aaKnown RBP18.71■□□□□ 0.59
TPR-205ENST00000474852 MAN1B1Q9UKM7 699 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 KCNJ14Q9UNX9 436 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 MRFAP1Q9Y605 127 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 UBN2Q6ZU65 1347 aa18.71■□□□□ 0.59
TPR-205ENST00000474852 BTBD18B2RXH4 712 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 MAP3K9P80192 1104 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 SPECC1LQ69YQ0 1117 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.7■□□□□ 0.58
TPR-205ENST00000474852 CPLX3Q8WVH0 158 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 AKAP2Q9Y2D5 859 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 A0A0U1RQJ8 604 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 CUTAO60888 179 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 CMTR1Q8N1G2 835 aaKnown RBP18.7■□□□□ 0.58
TPR-205ENST00000474852 KRI1Q8N9T8 703 aaKnown RBP18.7■□□□□ 0.58
TPR-205ENST00000474852 ATRIPQ8WXE1 791 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 SERTAD1Q9UHV2 236 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 GUCY1A2P33402 732 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 POSTNQ15063 836 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 FCHSD1Q86WN1 690 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 MRPL44Q9H9J2 332 aaKnown RBP18.7■□□□□ 0.58
TPR-205ENST00000474852 ARFGAP3Q9NP61 516 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 C4AP0C0L4 1744 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 C4BP0C0L5 1744 aa18.7■□□□□ 0.58
TPR-205ENST00000474852 SOWAHDA6NJG2 315 aa18.69■□□□□ 0.58
TPR-205ENST00000474852 TPM1P09493 284 aa18.69■□□□□ 0.58
TPR-205ENST00000474852 TMEM67Q5HYA8 995 aa18.69■□□□□ 0.58
TPR-205ENST00000474852 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
TPR-205ENST00000474852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.69■□□□□ 0.581e-7■■■■□ 22.6
TPR-205ENST00000474852 TULP2O00295 520 aa18.69■□□□□ 0.58
TPR-205ENST00000474852 STX10O60499 249 aa18.69■□□□□ 0.58
TPR-205ENST00000474852 TBX2Q13207 712 aaPredicted RBP18.69■□□□□ 0.58
TPR-205ENST00000474852 METTL24Q5JXM2 366 aa18.69■□□□□ 0.58
TPR-205ENST00000474852 TRIM34Q9BYJ4 488 aa18.69■□□□□ 0.58
TPR-205ENST00000474852 PUF60Q9UHX1 559 aaKnown RBP18.69■□□□□ 0.58
TPR-205ENST00000474852 NTRK3Q16288 839 aa18.68■□□□□ 0.58
TPR-205ENST00000474852 KLHL10Q6JEL2 608 aa18.68■□□□□ 0.58
TPR-205ENST00000474852 KIFC2Q96AC6 838 aa18.68■□□□□ 0.58
TPR-205ENST00000474852 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■□□□□ 8.7
TPR-205ENST00000474852 TICAM2Q86XR7 235 aa18.68■□□□□ 0.58
TPR-205ENST00000474852 CREBRFQ8IUR6 639 aa18.68■□□□□ 0.58
TPR-205ENST00000474852 ZKSCAN3Q9BRR0 538 aa18.68■□□□□ 0.58
TPR-205ENST00000474852 KIF1AQ12756 1690 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 FAM193AP78312 1265 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 MDM2Q00987 491 aaPredicted RBP18.67■□□□□ 0.58
TPR-205ENST00000474852 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.67■□□□□ 0.58
TPR-205ENST00000474852 TOMM22Q9NS69 142 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 FAM217BQ9NTX9 383 aaPredicted RBP18.67■□□□□ 0.58
TPR-205ENST00000474852 STX17P56962 302 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 CTDSPL2Q05D32 466 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 TJP1Q07157 1748 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 IFIT5Q13325 482 aaKnown RBP18.67■□□□□ 0.58
TPR-205ENST00000474852 RRP12Q5JTH9 1297 aaKnown RBP18.67■□□□□ 0.58
TPR-205ENST00000474852 NOSTRINQ8IVI9 506 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 DIS3L2Q8IYB7 885 aaKnown RBP18.67■□□□□ 0.58
TPR-205ENST00000474852 MED15Q96RN5 788 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 PIH1D3Q9NQM4 214 aaKnown RBP18.67■□□□□ 0.58
TPR-205ENST00000474852 ATG3Q9NT62 314 aa18.67■□□□□ 0.58
TPR-205ENST00000474852 FAM237AA0A1B0GTK4 181 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 TEX33O43247 280 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 TFRCP02786 760 aaKnown RBP18.66■□□□□ 0.58
TPR-205ENST00000474852 ADD2P35612 726 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 TOB1P50616 345 aaPredicted RBP18.66■□□□□ 0.58
TPR-205ENST00000474852 NR5A1Q13285 461 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 RSRC2Q7L4I2 434 aaKnown RBP18.66■□□□□ 0.58
TPR-205ENST00000474852 GOLGA1Q92805 767 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 TEX13AQ9BXU3 409 aaPredicted RBP18.66■□□□□ 0.58
TPR-205ENST00000474852 RAI14Q9P0K7 980 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 SLC12A7Q9Y666 1083 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 ZNF532Q9HCE3 1301 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 SPEF2Q9C093 1822 aa18.66■□□□□ 0.58
TPR-205ENST00000474852 SSRP1Q08945 709 aaKnown RBP18.66■□□□□ 0.58
TPR-205ENST00000474852 IGDCC4Q8TDY8 1250 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 1614.2 ms