RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 GOLM1Q8NBJ4 401 aa8.9□□□□□ -0.98
CNOT9-206ENST00000473626 FBXO27Q8NI29 283 aa8.9□□□□□ -0.98
CNOT9-206ENST00000473626 UTP4Q969X6 686 aaKnown RBP8.9□□□□□ -0.98
CNOT9-206ENST00000473626 FAM105AQ9NUU6 356 aa8.9□□□□□ -0.98
CNOT9-206ENST00000473626 MSTNO14793 375 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 GAS2O43903 313 aaKnown RBP8.89□□□□□ -0.99
CNOT9-206ENST00000473626 F13A1P00488 732 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 SLFN14P0C7P3 912 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 TCF3P15923 654 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 EIF4A3P38919 411 aaKnown RBP8.89□□□□□ -0.99
CNOT9-206ENST00000473626 ID3Q02535 119 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 ZC3H12AQ5D1E8 599 aaKnown RBP8.89□□□□□ -0.99
CNOT9-206ENST00000473626 SNAP47Q5SQN1 464 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
CNOT9-206ENST00000473626 TRIM42Q8IWZ5 723 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 PLPPR2Q96GM1 343 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 FANCD2OSQ96PS1 177 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 LGR6Q9HBX8 967 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 DISC1Q9NRI5 854 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 CRIM1Q9NZV1 1036 aa8.89□□□□□ -0.99
CNOT9-206ENST00000473626 TLR3O15455 904 aaKnown RBP8.88□□□□□ -0.99
CNOT9-206ENST00000473626 BMP3P12645 472 aa8.88□□□□□ -0.99
CNOT9-206ENST00000473626 RAB6AP20340 208 aa8.88□□□□□ -0.99
CNOT9-206ENST00000473626 ASPAP45381 313 aa8.88□□□□□ -0.99
CNOT9-206ENST00000473626 PPM1JQ5JR12 505 aa8.88□□□□□ -0.99
CNOT9-206ENST00000473626 FBLIM1Q8WUP2 373 aa8.88□□□□□ -0.99
CNOT9-206ENST00000473626 ZNF296Q8WUU4 475 aaPredicted RBP8.88□□□□□ -0.99
CNOT9-206ENST00000473626 HCLS1P14317 486 aaPredicted RBP8.87□□□□□ -0.99
CNOT9-206ENST00000473626 RAD51AP2Q09MP3 1159 aa8.87□□□□□ -0.99
CNOT9-206ENST00000473626 PWP1Q13610 501 aa8.87□□□□□ -0.99
CNOT9-206ENST00000473626 TTLL4Q14679 1199 aa8.87□□□□□ -0.99
CNOT9-206ENST00000473626 WIPI1Q5MNZ9 446 aaPredicted RBP8.87□□□□□ -0.99
CNOT9-206ENST00000473626 ELMO3Q96BJ8 720 aa8.87□□□□□ -0.99
CNOT9-206ENST00000473626 MYRFLQ96LU7 910 aa8.87□□□□□ -0.99
CNOT9-206ENST00000473626 IGSF5Q9NSI5 407 aa8.87□□□□□ -0.99
CNOT9-206ENST00000473626 DDX41Q9UJV9 622 aaKnown RBP8.87□□□□□ -0.99
CNOT9-206ENST00000473626 HIF3AQ9Y2N7 669 aa8.87□□□□□ -0.99
CNOT9-206ENST00000473626 CCDC180Q9P1Z9 1646 aa8.87□□□□□ -0.99
CNOT9-206ENST00000473626 PRAMEF27A3QJZ7 478 aa8.86□□□□□ -0.99
CNOT9-206ENST00000473626 NEFMP07197 916 aa8.86□□□□□ -0.99
CNOT9-206ENST00000473626 USP11P51784 963 aa8.86□□□□□ -0.99
CNOT9-206ENST00000473626 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.86□□□□□ -0.99
CNOT9-206ENST00000473626 UBE3DQ7Z6J8 389 aa8.86□□□□□ -0.99
CNOT9-206ENST00000473626 KCNF1Q9H3M0 494 aa8.86□□□□□ -0.99
CNOT9-206ENST00000473626 UBP1Q9NZI7 540 aa8.86□□□□□ -0.99
CNOT9-206ENST00000473626 FAM221AA4D161 298 aa8.85□□□□□ -0.99
CNOT9-206ENST00000473626 RNGTTO60942 597 aaKnown RBP8.85□□□□□ -0.99
CNOT9-206ENST00000473626 RXRBP28702 533 aa8.85□□□□□ -0.99
CNOT9-206ENST00000473626 CRKP46108 304 aa8.85□□□□□ -0.99
CNOT9-206ENST00000473626 FAM20CQ8IXL6 584 aa8.85□□□□□ -0.99
CNOT9-206ENST00000473626 NFICP08651 508 aa8.84□□□□□ -0.99
CNOT9-206ENST00000473626 FURINP09958 794 aa8.84□□□□□ -0.99
CNOT9-206ENST00000473626 MAP4P27816 1152 aaKnown RBP8.84□□□□□ -0.99
CNOT9-206ENST00000473626 ERCC5P28715 1186 aaPredicted RBP8.84□□□□□ -0.99
CNOT9-206ENST00000473626 GATAD2BQ8WXI9 593 aa8.84□□□□□ -0.99
CNOT9-206ENST00000473626 EAF1Q96JC9 268 aaPredicted RBP8.84□□□□□ -0.99
CNOT9-206ENST00000473626 SPON2Q9BUD6 331 aa8.84□□□□□ -0.99
CNOT9-206ENST00000473626 ACBD3Q9H3P7 528 aa8.84□□□□□ -0.99
CNOT9-206ENST00000473626 GSX1Q9H4S2 264 aaPredicted RBP8.84□□□□□ -0.99
CNOT9-206ENST00000473626 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.84□□□□□ -0.99
CNOT9-206ENST00000473626 SYNGAP1Q96PV0 1343 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 HMX2A2RU54 273 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 GFRA2O00451 464 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 DYNC1LI2O43237 492 aaPredicted RBP8.83□□□□□ -1
CNOT9-206ENST00000473626 GREM1O60565 184 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 CILPO75339 1184 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 NTF4P34130 210 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 TNNI2P48788 182 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 ERVK-24P63145 666 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 RSPO4Q2I0M5 234 aaPredicted RBP8.83□□□□□ -1
CNOT9-206ENST00000473626 ATXN3LQ9H3M9 355 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 PICK1Q9NRD5 415 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 DAGLAQ9Y4D2 1042 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 CORINQ9Y5Q5 1042 aa8.83□□□□□ -1
CNOT9-206ENST00000473626 DHX15O43143 795 aaKnown RBP8.82□□□□□ -1
CNOT9-206ENST00000473626 GRIN3BO60391 1043 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 RPL6Q02878 288 aaKnown RBP8.82□□□□□ -1
CNOT9-206ENST00000473626 RING1Q06587 406 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 NFKBIBQ15653 356 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 UVSSAQ2YD98 709 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 NKAPLQ5M9Q1 402 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 SCARA3Q6AZY7 606 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 PRR23CQ6ZRP0 262 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 BEND4Q6ZU67 534 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 CYFIP1Q7L576 1253 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 HDXQ7Z353 690 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 KIAA0825Q8IV33 1275 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 SHISA5Q8N114 240 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 ISL2Q96A47 359 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 SEMA6CQ9H3T2 930 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 ACSS3Q9H6R3 686 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 PIDD1Q9HB75 910 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 KCNQ5Q9NR82 932 aa8.82□□□□□ -1
CNOT9-206ENST00000473626 SUPT16HQ9Y5B9 1047 aaKnown RBP8.82□□□□□ -1
CNOT9-206ENST00000473626 HNRNPUQ00839 825 aaKnown RBP eCLIP8.81□□□□□ -1
CNOT9-206ENST00000473626 RNF214Q8ND24 703 aa8.81□□□□□ -1
CNOT9-206ENST00000473626 RAXQ9Y2V3 346 aa8.81□□□□□ -1
CNOT9-206ENST00000473626 POLR3KQ9Y2Y1 108 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms