RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 DENND2AQ9ULE3 1009 aa13.94□□□□□ -0.18
ACTB-209ENST00000473257 GABRQQ9UN88 632 aa13.94□□□□□ -0.18
ACTB-209ENST00000473257 MYPNQ86TC9 1320 aa13.93□□□□□ -0.18
ACTB-209ENST00000473257 BTDP43251 543 aa13.93□□□□□ -0.18
ACTB-209ENST00000473257 FXR1P51114 621 aaKnown RBP eCLIP13.93□□□□□ -0.183e-14■■□□□ 11.8
ACTB-209ENST00000473257 TBC1D9Q6ZT07 1266 aa13.93□□□□□ -0.18
ACTB-209ENST00000473257 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
ACTB-209ENST00000473257 RAET1EQ8TD07 263 aa13.93□□□□□ -0.18
ACTB-209ENST00000473257 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
ACTB-209ENST00000473257 GAKO14976 1311 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 SALL1Q9NSC2 1324 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 A0A1B0GUL7 405 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 TRIM75PA6NK02 468 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 BCRP11274 1271 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 CCL5P13501 91 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 PTPRAP18433 802 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 GRK4P32298 578 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 SCYL3Q8IZE3 742 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 XAGE2Q96GT9 111 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 COPRSQ9NQ92 184 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 BIN2Q9UBW5 565 aaPredicted RBP13.92□□□□□ -0.18
ACTB-209ENST00000473257 DOCK2Q92608 1830 aa13.92□□□□□ -0.18
ACTB-209ENST00000473257 SRGAP3O43295 1099 aa13.91□□□□□ -0.18
ACTB-209ENST00000473257 ELNP15502 786 aa13.91□□□□□ -0.18
ACTB-209ENST00000473257 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
ACTB-209ENST00000473257 MECOMQ03112 1051 aa13.91□□□□□ -0.18
ACTB-209ENST00000473257 NEUROD6Q96NK8 337 aa13.91□□□□□ -0.18
ACTB-209ENST00000473257 IDI2Q9BXS1 227 aa13.91□□□□□ -0.18
ACTB-209ENST00000473257 API5Q9BZZ5 524 aaKnown RBP13.91□□□□□ -0.18
ACTB-209ENST00000473257 UNC93B1Q9H1C4 597 aa13.91□□□□□ -0.18
ACTB-209ENST00000473257 PICK1Q9NRD5 415 aa13.91□□□□□ -0.18
ACTB-209ENST00000473257 AFG3L2Q9Y4W6 797 aa13.91□□□□□ -0.18
ACTB-209ENST00000473257 A0A0G2JLL6 359 aaPredicted RBP13.9□□□□□ -0.18
ACTB-209ENST00000473257 CXCL11O14625 94 aa13.9□□□□□ -0.18
ACTB-209ENST00000473257 SEMA3EO15041 775 aa13.9□□□□□ -0.18
ACTB-209ENST00000473257 ENTPD3O75355 529 aa13.9□□□□□ -0.18
ACTB-209ENST00000473257 RHBDL3P58872 404 aa13.9□□□□□ -0.18
ACTB-209ENST00000473257 RRP1BQ14684 758 aaKnown RBP13.9□□□□□ -0.18
ACTB-209ENST00000473257 TREML2Q5T2D2 321 aa13.9□□□□□ -0.18
ACTB-209ENST00000473257 PRRT2Q7Z6L0 340 aaPredicted RBP13.9□□□□□ -0.18
ACTB-209ENST00000473257 PARK7Q99497 189 aaKnown RBP13.9□□□□□ -0.18
ACTB-209ENST00000473257 RNF208Q9H0X6 261 aa13.9□□□□□ -0.18
ACTB-209ENST00000473257 HMG20BQ9P0W2 317 aa13.9□□□□□ -0.18
ACTB-209ENST00000473257 FBXO3Q9UK99 471 aa13.9□□□□□ -0.18
ACTB-209ENST00000473257 MROH7-TTC4A0A0A0MT08 1334 aa13.9□□□□□ -0.19
ACTB-209ENST00000473257 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
ACTB-209ENST00000473257 DPF3Q92784 378 aa13.89□□□□□ -0.19
ACTB-209ENST00000473257 TAOK2Q9UL54 1235 aa13.89□□□□□ -0.19
ACTB-209ENST00000473257 PHIPQ8WWQ0 1821 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 PNMA6EA0A0J9YXQ4 647 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 PEX10O60683 326 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 BCAR3O75815 825 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 GNRH1P01148 92 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 PRMT2P55345 433 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 FCGRTP55899 365 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 SHROOM1Q2M3G4 852 aaPredicted RBP13.88□□□□□ -0.19
ACTB-209ENST00000473257 CLUAP1Q96AJ1 413 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 SNRKQ9NRH2 765 aa13.88□□□□□ -0.19
ACTB-209ENST00000473257 MGAMO43451 1857 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 DOCK3Q8IZD9 2030 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 GPR75-ASB3A0A0A6YYF3 556 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 ADCY3O60266 1144 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 HOXD10P28358 340 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 FLT3LGP49771 235 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 MAP3K10Q02779 954 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 ANKRD13CQ8N6S4 541 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
ACTB-209ENST00000473257 PTPRFP10586 1907 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 LAMA3Q16787 3333 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 DOCK1Q14185 1865 aa13.87□□□□□ -0.19
ACTB-209ENST00000473257 INHAP05111 366 aa13.86□□□□□ -0.19
ACTB-209ENST00000473257 GJB1P08034 283 aa13.86□□□□□ -0.19
ACTB-209ENST00000473257 GJA8P48165 433 aa13.86□□□□□ -0.19
ACTB-209ENST00000473257 JAG1P78504 1218 aa13.86□□□□□ -0.19
ACTB-209ENST00000473257 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
ACTB-209ENST00000473257 GORABQ5T7V8 394 aa13.86□□□□□ -0.19
ACTB-209ENST00000473257 FASTKD5Q7L8L6 764 aaKnown RBP13.86□□□□□ -0.19
ACTB-209ENST00000473257 UBE2Q1Q7Z7E8 422 aa13.86□□□□□ -0.19
ACTB-209ENST00000473257 ZGPATQ8N5A5 531 aaKnown RBP13.86□□□□□ -0.19
ACTB-209ENST00000473257 SPATA5Q8NB90 893 aa13.86□□□□□ -0.19
ACTB-209ENST00000473257 SH3RF3Q8TEJ3 882 aaPredicted RBP13.86□□□□□ -0.19
ACTB-209ENST00000473257 SMCR8Q8TEV9 937 aaPredicted RBP13.86□□□□□ -0.19
ACTB-209ENST00000473257 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
ACTB-209ENST00000473257 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
ACTB-209ENST00000473257 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■□□□ 13.5
ACTB-209ENST00000473257 RAI14Q9P0K7 980 aa13.86□□□□□ -0.19
ACTB-209ENST00000473257 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
ACTB-209ENST00000473257 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
ACTB-209ENST00000473257 CTNND1O60716 968 aaKnown RBP13.85□□□□□ -0.19
ACTB-209ENST00000473257 GNAI3P08754 354 aa13.85□□□□□ -0.19
ACTB-209ENST00000473257 TRIM27P14373 513 aa13.85□□□□□ -0.19
ACTB-209ENST00000473257 MCAMP43121 646 aa13.85□□□□□ -0.19
ACTB-209ENST00000473257 HMGCS2P54868 508 aa13.85□□□□□ -0.19
ACTB-209ENST00000473257 SPP2Q13103 211 aa13.85□□□□□ -0.19
ACTB-209ENST00000473257 SPTY2D1Q68D10 685 aaPredicted RBP13.85□□□□□ -0.19
ACTB-209ENST00000473257 U2AF1L4Q8WU68 220 aaKnown RBP13.85□□□□□ -0.19
ACTB-209ENST00000473257 AKAP2Q9Y2D5 859 aa13.85□□□□□ -0.19
ACTB-209ENST00000473257 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
ACTB-209ENST00000473257 FARP2O94887 1054 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms