RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HCLS1P14317 486 aaPredicted RBP8.95□□□□□ -0.98
CD46-213ENST00000471987 ZNF252P-AS1Q0IIN9 211 aa8.95□□□□□ -0.98
CD46-213ENST00000471987 CDK5R2Q13319 367 aa8.95□□□□□ -0.98
CD46-213ENST00000471987 ABI1Q8IZP0 508 aa8.95□□□□□ -0.98
CD46-213ENST00000471987 KRTAP4-7Q9BYR0 210 aa8.95□□□□□ -0.98
CD46-213ENST00000471987 CBX8Q9HC52 389 aa8.95□□□□□ -0.98
CD46-213ENST00000471987 ADGRE2Q9UHX3 823 aa8.95□□□□□ -0.98
CD46-213ENST00000471987 PCOLCE2Q9UKZ9 415 aa8.95□□□□□ -0.98
CD46-213ENST00000471987 ZC3H12AQ5D1E8 599 aaKnown RBP8.94□□□□□ -0.98
CD46-213ENST00000471987 TPTE2Q6XPS3 522 aa8.94□□□□□ -0.98
CD46-213ENST00000471987 TP53INP2Q8IXH6 220 aa8.94□□□□□ -0.98
CD46-213ENST00000471987 ACSBG1Q96GR2 724 aa8.94□□□□□ -0.98
CD46-213ENST00000471987 TRAIPQ9BWF2 469 aa8.94□□□□□ -0.98
CD46-213ENST00000471987 OSBPL7Q9BZF2 842 aa8.94□□□□□ -0.98
CD46-213ENST00000471987 SPG7Q9UQ90 795 aa8.94□□□□□ -0.98
CD46-213ENST00000471987 ENC1O14682 589 aa8.93□□□□□ -0.98
CD46-213ENST00000471987 FAM87AP0C7U9 286 aa8.93□□□□□ -0.98
CD46-213ENST00000471987 ERVK-24P63145 666 aa8.93□□□□□ -0.98
CD46-213ENST00000471987 NFXL1Q6ZNB6 911 aa8.93□□□□□ -0.98
CD46-213ENST00000471987 AGBL5Q8NDL9 886 aa8.93□□□□□ -0.98
CD46-213ENST00000471987 FLCNQ8NFG4 579 aa8.93□□□□□ -0.98
CD46-213ENST00000471987 GPBAR1Q8TDU6 330 aa8.93□□□□□ -0.98
CD46-213ENST00000471987 SETDB2Q96T68 719 aa8.93□□□□□ -0.98
CD46-213ENST00000471987 RNF214Q8ND24 703 aa8.92□□□□□ -0.98
CD46-213ENST00000471987 ANKRD24Q8TF21 1146 aa8.92□□□□□ -0.98
CD46-213ENST00000471987 SSU72Q9NP77 194 aaKnown RBP8.92□□□□□ -0.98
CD46-213ENST00000471987 CACNA2D2Q9NY47 1150 aa8.92□□□□□ -0.98
CD46-213ENST00000471987 WWC3Q9ULE0 1092 aa8.92□□□□□ -0.98
CD46-213ENST00000471987 NEFMP07197 916 aa8.91□□□□□ -0.98
CD46-213ENST00000471987 STK11IPQ8N1F8 1099 aa8.91□□□□□ -0.98
CD46-213ENST00000471987 ISL2Q96A47 359 aa8.91□□□□□ -0.98
CD46-213ENST00000471987 C12orf49Q9H741 205 aa8.91□□□□□ -0.98
CD46-213ENST00000471987 FBXO24O75426 580 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 TRIM37O94972 964 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 BMP6P22004 513 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 TXKP42681 527 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 LRRC14Q15048 493 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 SCARA3Q6AZY7 606 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.9□□□□□ -0.98
CD46-213ENST00000471987 FMNL2Q96PY5 1086 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 PAK6Q9NQU5 681 aaPredicted RBP8.9□□□□□ -0.98
CD46-213ENST00000471987 FAM8A1Q9UBU6 413 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 SLC5A6Q9Y289 635 aa8.9□□□□□ -0.98
CD46-213ENST00000471987 PAGE1O75459 146 aa8.89□□□□□ -0.99
CD46-213ENST00000471987 P4HBP07237 508 aaKnown RBP8.89□□□□□ -0.99
CD46-213ENST00000471987 LLGL2Q6P1M3 1020 aa8.89□□□□□ -0.99
CD46-213ENST00000471987 GRIN3AQ8TCU5 1115 aa8.89□□□□□ -0.99
CD46-213ENST00000471987 MISP3Q96FF7 219 aa8.89□□□□□ -0.99
CD46-213ENST00000471987 FRMD6Q96NE9 622 aa8.89□□□□□ -0.99
CD46-213ENST00000471987 DUSP23Q9BVJ7 150 aa8.89□□□□□ -0.99
CD46-213ENST00000471987 LDHBP07195 334 aaKnown RBP8.88□□□□□ -0.99
CD46-213ENST00000471987 MPRIPQ6WCQ1 1025 aa8.88□□□□□ -0.99
CD46-213ENST00000471987 NETO1Q8TDF5 533 aa8.88□□□□□ -0.99
CD46-213ENST00000471987 BCL7CQ8WUZ0 217 aaPredicted RBP8.88□□□□□ -0.99
CD46-213ENST00000471987 RNF114Q9Y508 228 aa8.88□□□□□ -0.99
CD46-213ENST00000471987 CBLL1Q75N03 491 aa8.87□□□□□ -0.99
CD46-213ENST00000471987 MKNK2Q9HBH9 465 aa8.87□□□□□ -0.99
CD46-213ENST00000471987 PICK1Q9NRD5 415 aa8.87□□□□□ -0.99
CD46-213ENST00000471987 CYP8B1Q9UNU6 501 aa8.87□□□□□ -0.99
CD46-213ENST00000471987 LEFTY1O75610 366 aa8.86□□□□□ -0.99
CD46-213ENST00000471987 USP17L7P0C7H9 530 aa8.86□□□□□ -0.99
CD46-213ENST00000471987 PPM1JQ5JR12 505 aa8.86□□□□□ -0.99
CD46-213ENST00000471987 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
CD46-213ENST00000471987 PLD6Q8N2A8 252 aaKnown RBP8.86□□□□□ -0.99
CD46-213ENST00000471987 FAM181AQ8N9Y4 354 aa8.86□□□□□ -0.99
CD46-213ENST00000471987 GOLGA2P5Q9HBQ8 144 aa8.86□□□□□ -0.99
CD46-213ENST00000471987 FANCGO15287 622 aa8.85□□□□□ -0.99
CD46-213ENST00000471987 CELA3AP09093 270 aa8.85□□□□□ -0.99
CD46-213ENST00000471987 FGD1P98174 961 aa8.85□□□□□ -0.99
CD46-213ENST00000471987 PCNX4Q63HM2 1172 aa8.85□□□□□ -0.99
CD46-213ENST00000471987 TOP6BLQ8N6T0 577 aa8.85□□□□□ -0.99
CD46-213ENST00000471987 PCDHA4Q9UN74 947 aa8.85□□□□□ -0.99
CD46-213ENST00000471987 CSADQ9Y600 493 aa8.85□□□□□ -0.99
CD46-213ENST00000471987 DCDC2CA8MYV0 355 aa8.84□□□□□ -0.99
CD46-213ENST00000471987 GNA15P30679 374 aa8.84□□□□□ -0.99
CD46-213ENST00000471987 RING1Q06587 406 aa8.84□□□□□ -0.99
CD46-213ENST00000471987 SV2BQ7L1I2 683 aa8.84□□□□□ -0.99
CD46-213ENST00000471987 C12orf40Q86WS4 652 aa8.84□□□□□ -0.99
CD46-213ENST00000471987 TTF2Q9UNY4 1162 aaKnown RBP8.84□□□□□ -0.99
CD46-213ENST00000471987 PRPF40AO75400 957 aaKnown RBP8.83□□□□□ -1
CD46-213ENST00000471987 NTF4P34130 210 aa8.83□□□□□ -1
CD46-213ENST00000471987 COL19A1Q14993 1142 aa8.83□□□□□ -1
CD46-213ENST00000471987 IFI16Q16666 785 aaKnown RBP8.83□□□□□ -1
CD46-213ENST00000471987 RASIP1Q5U651 963 aa8.83□□□□□ -1
CD46-213ENST00000471987 CDC37L1Q7L3B6 337 aa8.83□□□□□ -1
CD46-213ENST00000471987 SPRED2Q7Z698 418 aa8.83□□□□□ -1
CD46-213ENST00000471987 KCT2Q8NC54 265 aa8.83□□□□□ -1
CD46-213ENST00000471987 VAV3Q9UKW4 847 aa8.83□□□□□ -1
CD46-213ENST00000471987 CEACAM5P06731 702 aa8.82□□□□□ -1
CD46-213ENST00000471987 EIF4BP23588 611 aaKnown RBP8.82□□□□□ -1
CD46-213ENST00000471987 OXCT1P55809 520 aa8.82□□□□□ -1
CD46-213ENST00000471987 PRKCQQ04759 706 aa8.82□□□□□ -1
CD46-213ENST00000471987 PLCL1Q15111 1095 aa8.82□□□□□ -1
CD46-213ENST00000471987 ZBTB37Q5TC79 503 aa8.82□□□□□ -1
CD46-213ENST00000471987 ZNF574Q6ZN55 896 aaPredicted RBP8.82□□□□□ -1
CD46-213ENST00000471987 ELMO3Q96BJ8 720 aa8.82□□□□□ -1
CD46-213ENST00000471987 PRDM10Q9NQV6 1147 aa8.82□□□□□ -1
CD46-213ENST00000471987 GTF2IRD1Q9UHL9 959 aa8.82□□□□□ -1
CD46-213ENST00000471987 TMEM265A0A087WTH1 108 aa8.81□□□□□ -1
CD46-213ENST00000471987 JUNBP17275 347 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms