RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CA12O43570 354 aa18.05■□□□□ 0.48
CDC42SE1-203ENST00000470278 PLCG2P16885 1265 aa18.05■□□□□ 0.48
CDC42SE1-203ENST00000470278 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
CDC42SE1-203ENST00000470278 RGMBQ6NW40 437 aa18.05■□□□□ 0.48
CDC42SE1-203ENST00000470278 CDCA5Q96FF9 252 aa18.05■□□□□ 0.48
CDC42SE1-203ENST00000470278 NOL10Q9BSC4 688 aaKnown RBP18.05■□□□□ 0.48
CDC42SE1-203ENST00000470278 IDI2Q9BXS1 227 aa18.05■□□□□ 0.48
CDC42SE1-203ENST00000470278 COL2A1P02458 1487 aaPredicted RBP18.05■□□□□ 0.48
CDC42SE1-203ENST00000470278 DDX60LQ5H9U9 1706 aaKnown RBP18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 GSPT1P15170 499 aaKnown RBP18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 FAM83AQ86UY5 434 aa18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 RIOK1Q9BRS2 568 aaKnown RBP18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 FSD1Q9BTV5 496 aa18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 VEZTQ9HBM0 779 aa18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 AATFQ9NY61 560 aaKnown RBP eCLIP18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 SCAF8Q9UPN6 1271 aaKnown RBP18.04■□□□□ 0.48
CDC42SE1-203ENST00000470278 WDHD1O75717 1129 aaPredicted RBP18.03■□□□□ 0.48
CDC42SE1-203ENST00000470278 SLC10A3P09131 477 aa18.03■□□□□ 0.48
CDC42SE1-203ENST00000470278 DEFB129Q9H1M3 183 aa18.03■□□□□ 0.48
CDC42SE1-203ENST00000470278 USP40Q9NVE5 1235 aa18.03■□□□□ 0.48
CDC42SE1-203ENST00000470278 CCDC85CA6NKD9 419 aa18.02■□□□□ 0.48
CDC42SE1-203ENST00000470278 RNF113AO15541 343 aaKnown RBP18.02■□□□□ 0.48
CDC42SE1-203ENST00000470278 TNNI2P48788 182 aa18.02■□□□□ 0.48
CDC42SE1-203ENST00000470278 KIF23Q02241 960 aaPredicted RBP18.02■□□□□ 0.48
CDC42SE1-203ENST00000470278 APPBP2Q92624 585 aa18.02■□□□□ 0.48
CDC42SE1-203ENST00000470278 MAGEB6P1A0A0J9YX57 407 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 CACNB3P54284 484 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 NFIAQ12857 509 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 RASA3Q14644 834 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 MOB2Q70IA6 237 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 RASAL3Q86YV0 1011 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 MIGA1Q8NAN2 632 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 SH3RF3Q8TEJ3 882 aaPredicted RBP18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
CDC42SE1-203ENST00000470278 TCP10L2B9ZVM9 353 aa18■□□□□ 0.47
CDC42SE1-203ENST00000470278 ENTPD3O75355 529 aa18■□□□□ 0.47
CDC42SE1-203ENST00000470278 CHGBP05060 677 aa18■□□□□ 0.47
CDC42SE1-203ENST00000470278 TEX11Q8IYF3 940 aa18■□□□□ 0.47
CDC42SE1-203ENST00000470278 FAM151AQ8WW52 585 aa18■□□□□ 0.47
CDC42SE1-203ENST00000470278 FAM198AQ9UFP1 575 aa18■□□□□ 0.47
CDC42SE1-203ENST00000470278 NAV1Q8NEY1 1877 aa18■□□□□ 0.47
CDC42SE1-203ENST00000470278 SSC5DA1L4H1 1573 aa18■□□□□ 0.47
CDC42SE1-203ENST00000470278 RGS3P49796 1198 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 DYNLL1P63167 89 aaKnown RBP17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 DGKZQ13574 1117 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 BMP2KLQ5H9B9 411 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 ZMYM1Q5SVZ6 1142 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 C2orf69Q8N8R5 385 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 RILPL2Q969X0 211 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 TEPSINQ96N21 525 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 CSRNP1Q96S65 589 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 PUS7LQ9H0K6 701 aaKnown RBP17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 RNF186Q9NXI6 227 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 SAGE1Q9NXZ1 904 aa17.99■□□□□ 0.47
CDC42SE1-203ENST00000470278 FLT1P17948 1338 aa17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 MBD4O95243 580 aa17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 SDSP20132 328 aa17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 ZNF157P51786 506 aaPredicted RBP17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 SKAP1Q86WV1 359 aa17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 LCORLQ8N3X6 602 aa17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 OSBP2Q969R2 916 aa17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 TMEM39BQ9GZU3 492 aa17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 DDX4Q9NQI0 724 aaKnown RBP17.98■□□□□ 0.47
CDC42SE1-203ENST00000470278 OTOFQ9HC10 1997 aa17.97■□□□□ 0.47
CDC42SE1-203ENST00000470278 HIP1O00291 1037 aa17.97■□□□□ 0.47
CDC42SE1-203ENST00000470278 PRAMEF18Q5VWM3 479 aa17.97■□□□□ 0.47
CDC42SE1-203ENST00000470278 CRNKL1Q9BZJ0 848 aaKnown RBP17.97■□□□□ 0.47
CDC42SE1-203ENST00000470278 OSBPL5Q9H0X9 879 aaPredicted RBP17.97■□□□□ 0.47
CDC42SE1-203ENST00000470278 SUPT20HL1Q3ZLR7 823 aa17.96■□□□□ 0.47
CDC42SE1-203ENST00000470278 CCDC102AQ96A19 550 aa17.96■□□□□ 0.47
CDC42SE1-203ENST00000470278 ARMT1Q9H993 441 aa17.96■□□□□ 0.47
CDC42SE1-203ENST00000470278 HELLSQ9NRZ9 838 aa17.96■□□□□ 0.47
CDC42SE1-203ENST00000470278 MYH1P12882 1939 aa17.96■□□□□ 0.47
CDC42SE1-203ENST00000470278 SIPA1L1O43166 1804 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 GPAA1O43292 621 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 TRPA1O75762 1119 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 SLC34A2O95436 690 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 NF2P35240 595 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 FKBP1BP68106 108 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 TCP10Q12799 353 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 PICALMQ13492 652 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 TGFBRAP1Q8WUH2 860 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 HOOK2Q96ED9 719 aa17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 STRBPQ96SI9 672 aaKnown RBP17.95■□□□□ 0.46
CDC42SE1-203ENST00000470278 A0A0D9SFI3 127 aa17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 M0R2C6 588 aa17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 GNAT2P19087 354 aa17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 MLLT1Q03111 559 aaPredicted RBP17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 NBPF12Q5TAG4 269 aaPredicted RBP17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 CDAN1Q8IWY9 1227 aa17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 ZFPM1Q8IX07 1006 aa17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 DHX36Q9H2U1 1008 aaKnown RBP17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 DIAPH3Q9NSV4 1193 aa17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 ATP8A2Q9NTI2 1148 aa17.94■□□□□ 0.46
CDC42SE1-203ENST00000470278 USP5P45974 858 aa17.93■□□□□ 0.46
CDC42SE1-203ENST00000470278 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
CDC42SE1-203ENST00000470278 MCMDC2Q4G0Z9 681 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms