RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 KBTBD3Q8NAB2 608 aa24.24■■□□□ 1.47
NPHP4-206ENST00000468253 SLC10A4Q96EP9 437 aa24.24■■□□□ 1.47
NPHP4-206ENST00000468253 MYH2Q9UKX2 1941 aa24.23■■□□□ 1.47
NPHP4-206ENST00000468253 SLC10A3P09131 477 aa24.23■■□□□ 1.47
NPHP4-206ENST00000468253 TICAM2Q86XR7 235 aa24.23■■□□□ 1.47
NPHP4-206ENST00000468253 REM2Q8IYK8 340 aaPredicted RBP24.23■■□□□ 1.47
NPHP4-206ENST00000468253 LNPKQ9C0E8 428 aa24.23■■□□□ 1.47
NPHP4-206ENST00000468253 ZNF532Q9HCE3 1301 aa24.23■■□□□ 1.47
NPHP4-206ENST00000468253 SSC5DA1L4H1 1573 aa24.23■■□□□ 1.47
NPHP4-206ENST00000468253 PAPPA2Q9BXP8 1791 aa24.23■■□□□ 1.47
NPHP4-206ENST00000468253 MAP2K1Q02750 393 aaPredicted RBP24.22■■□□□ 1.47
NPHP4-206ENST00000468253 LRRFIP1Q32MZ4 808 aaKnown RBP24.22■■□□□ 1.47
NPHP4-206ENST00000468253 TSHZ3Q63HK5 1081 aa24.22■■□□□ 1.47
NPHP4-206ENST00000468253 SH3BP5LQ7L8J4 393 aa24.22■■□□□ 1.47
NPHP4-206ENST00000468253 RIOK1Q9BRS2 568 aaKnown RBP24.22■■□□□ 1.47
NPHP4-206ENST00000468253 ZNF341Q9BYN7 854 aa24.22■■□□□ 1.47
NPHP4-206ENST00000468253 DHX36Q9H2U1 1008 aaKnown RBP24.22■■□□□ 1.47
NPHP4-206ENST00000468253 ZNF112Q9UJU3 913 aa24.22■■□□□ 1.47
NPHP4-206ENST00000468253 ATRNL1Q5VV63 1379 aa24.21■■□□□ 1.47
NPHP4-206ENST00000468253 MAGEB6P1A0A0J9YX57 407 aa24.21■■□□□ 1.47
NPHP4-206ENST00000468253 TBC1D12O60347 775 aa24.21■■□□□ 1.47
NPHP4-206ENST00000468253 DYNLL1P63167 89 aaKnown RBP24.21■■□□□ 1.47
NPHP4-206ENST00000468253 PICALMQ13492 652 aa24.21■■□□□ 1.47
NPHP4-206ENST00000468253 ZSCAN29Q8IWY8 852 aaPredicted RBP24.21■■□□□ 1.47
NPHP4-206ENST00000468253 CSRNP1Q96S65 589 aa24.21■■□□□ 1.47
NPHP4-206ENST00000468253 OSBPL5Q9H0X9 879 aaPredicted RBP24.21■■□□□ 1.47
NPHP4-206ENST00000468253 OSBPL3Q9H4L5 887 aa24.21■■□□□ 1.47
NPHP4-206ENST00000468253 DDTLA6NHG4 134 aaPredicted RBP24.2■■□□□ 1.46
NPHP4-206ENST00000468253 CENPBP07199 599 aaPredicted RBP24.2■■□□□ 1.46
NPHP4-206ENST00000468253 ZFYP08048 801 aaPredicted RBP24.2■■□□□ 1.46
NPHP4-206ENST00000468253 RASAL3Q86YV0 1011 aa24.2■■□□□ 1.46
NPHP4-206ENST00000468253 MIGA1Q8NAN2 632 aa24.2■■□□□ 1.46
NPHP4-206ENST00000468253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.2■■□□□ 1.46
NPHP4-206ENST00000468253 TGFBRAP1Q8WUH2 860 aa24.2■■□□□ 1.46
NPHP4-206ENST00000468253 FZD1Q9UP38 647 aa24.2■■□□□ 1.46
NPHP4-206ENST00000468253 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.19■■□□□ 1.46
NPHP4-206ENST00000468253 MIGA2Q7L4E1 593 aa24.19■■□□□ 1.46
NPHP4-206ENST00000468253 WBP1LQ9NX94 342 aa24.19■■□□□ 1.46
NPHP4-206ENST00000468253 AOC2O75106 756 aa24.18■■□□□ 1.46
NPHP4-206ENST00000468253 GRM1Q13255 1194 aa24.18■■□□□ 1.46
NPHP4-206ENST00000468253 FOXP4Q8IVH2 680 aaPredicted RBP24.18■■□□□ 1.46
NPHP4-206ENST00000468253 PI4KBQ9UBF8 816 aa24.18■■□□□ 1.46
NPHP4-206ENST00000468253 COL2A1P02458 1487 aaPredicted RBP24.18■■□□□ 1.46
NPHP4-206ENST00000468253 RNF113AO15541 343 aaKnown RBP24.17■■□□□ 1.46
NPHP4-206ENST00000468253 SPRYD7Q5W111 196 aa24.17■■□□□ 1.46
NPHP4-206ENST00000468253 PLEKHM2Q8IWE5 1019 aa24.17■■□□□ 1.46
NPHP4-206ENST00000468253 CRNKL1Q9BZJ0 848 aaKnown RBP24.17■■□□□ 1.46
NPHP4-206ENST00000468253 CSADQ9Y600 493 aa24.17■■□□□ 1.46
NPHP4-206ENST00000468253 FLT1P17948 1338 aa24.16■■□□□ 1.46
NPHP4-206ENST00000468253 ZBTB48P10074 688 aaPredicted RBP24.16■■□□□ 1.46
NPHP4-206ENST00000468253 KIF23Q02241 960 aaPredicted RBP24.16■■□□□ 1.46
NPHP4-206ENST00000468253 METTL16Q86W50 562 aaKnown RBP24.16■■□□□ 1.46
NPHP4-206ENST00000468253 MAPKAPK5Q8IW41 473 aa24.16■■□□□ 1.46
NPHP4-206ENST00000468253 EVI5LQ96CN4 794 aa24.16■■□□□ 1.46
NPHP4-206ENST00000468253 CLMNQ96JQ2 1002 aa24.16■■□□□ 1.46
NPHP4-206ENST00000468253 WRNIP1Q96S55 665 aa24.16■■□□□ 1.46
NPHP4-206ENST00000468253 PCNTO95613 3336 aa24.15■■□□□ 1.46
NPHP4-206ENST00000468253 PHF20L1A8MW92 1017 aa24.15■■□□□ 1.46
NPHP4-206ENST00000468253 USP5P45974 858 aa24.15■■□□□ 1.46
NPHP4-206ENST00000468253 INHBEP58166 350 aa24.15■■□□□ 1.46
NPHP4-206ENST00000468253 HERC5Q9UII4 1024 aaKnown RBP24.15■■□□□ 1.46
NPHP4-206ENST00000468253 VGLL4Q14135 290 aa24.14■■□□□ 1.45
NPHP4-206ENST00000468253 ZIC5Q96T25 663 aa24.14■■□□□ 1.45
NPHP4-206ENST00000468253 TM4SF4P48230 202 aa24.13■■□□□ 1.45
NPHP4-206ENST00000468253 NOL9Q5SY16 702 aaKnown RBP24.13■■□□□ 1.45
NPHP4-206ENST00000468253 APPBP2Q92624 585 aa24.13■■□□□ 1.45
NPHP4-206ENST00000468253 WNK4Q96J92 1243 aa24.13■■□□□ 1.45
NPHP4-206ENST00000468253 ATP8A2Q9NTI2 1148 aa24.13■■□□□ 1.45
NPHP4-206ENST00000468253 CA12O43570 354 aa24.12■■□□□ 1.45
NPHP4-206ENST00000468253 CTNND1O60716 968 aaKnown RBP24.12■■□□□ 1.45
NPHP4-206ENST00000468253 SLFNL1Q499Z3 407 aa24.12■■□□□ 1.45
NPHP4-206ENST00000468253 TTC6Q86TZ1 520 aa24.12■■□□□ 1.45
NPHP4-206ENST00000468253 ERO1BQ86YB8 467 aa24.12■■□□□ 1.45
NPHP4-206ENST00000468253 LCORLQ8N3X6 602 aa24.12■■□□□ 1.45
NPHP4-206ENST00000468253 ZKSCAN4Q969J2 545 aaPredicted RBP24.12■■□□□ 1.45
NPHP4-206ENST00000468253 AIDAQ96BJ3 306 aa24.12■■□□□ 1.45
NPHP4-206ENST00000468253 PUS7LQ9H0K6 701 aaKnown RBP24.12■■□□□ 1.45
NPHP4-206ENST00000468253 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.12■■□□□ 1.45
NPHP4-206ENST00000468253 TAOK2Q9UL54 1235 aa24.12■■□□□ 1.45
NPHP4-206ENST00000468253 PALD1Q9ULE6 856 aa24.12■■□□□ 1.45
NPHP4-206ENST00000468253 MBD4O95243 580 aa24.11■■□□□ 1.45
NPHP4-206ENST00000468253 HLA-DOAP06340 250 aa24.11■■□□□ 1.45
NPHP4-206ENST00000468253 STRBPQ96SI9 672 aaKnown RBP24.11■■□□□ 1.45
NPHP4-206ENST00000468253 FSD1Q9BTV5 496 aa24.11■■□□□ 1.45
NPHP4-206ENST00000468253 BEGAINQ9BUH8 593 aa24.11■■□□□ 1.45
NPHP4-206ENST00000468253 ARMT1Q9H993 441 aa24.11■■□□□ 1.45
NPHP4-206ENST00000468253 ELP3Q9H9T3 547 aa24.11■■□□□ 1.45
NPHP4-206ENST00000468253 DOCK2Q92608 1830 aa24.11■■□□□ 1.45
NPHP4-206ENST00000468253 MANSC4A6NHS7 340 aaPredicted RBP24.1■■□□□ 1.45
NPHP4-206ENST00000468253 SPDYE5A6NIY4 337 aa24.1■■□□□ 1.45
NPHP4-206ENST00000468253 CHGBP05060 677 aa24.1■■□□□ 1.45
NPHP4-206ENST00000468253 NEFLP07196 543 aa24.1■■□□□ 1.45
NPHP4-206ENST00000468253 INPP5BP32019 993 aa24.1■■□□□ 1.45
NPHP4-206ENST00000468253 OSBP2Q969R2 916 aa24.1■■□□□ 1.45
NPHP4-206ENST00000468253 OPTNQ96CV9 577 aa24.1■■□□□ 1.45
NPHP4-206ENST00000468253 SNCAIPQ9Y6H5 919 aa24.1■■□□□ 1.45
NPHP4-206ENST00000468253 MAST2Q6P0Q8 1798 aa24.1■■□□□ 1.45
NPHP4-206ENST00000468253 MYO5AQ9Y4I1 1855 aaKnown RBP24.09■■□□□ 1.45
NPHP4-206ENST00000468253 HSPA1AP0DMV8 641 aaKnown RBP24.09■■□□□ 1.45
NPHP4-206ENST00000468253 HSPA1BP0DMV9 641 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms