RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRPF3-202ENST00000467329 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
PRPF3-202ENST00000467329 B4E1Z4 1266 aa11.12□□□□□ -0.63
PRPF3-202ENST00000467329 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
PRPF3-202ENST00000467329 AMOTL1Q8IY63 956 aa11.12□□□□□ -0.63
PRPF3-202ENST00000467329 CERS5Q8N5B7 392 aa11.12□□□□□ -0.63
PRPF3-202ENST00000467329 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
PRPF3-202ENST00000467329 ESR2Q92731 530 aa11.12□□□□□ -0.63
PRPF3-202ENST00000467329 LARP6Q9BRS8 491 aaKnown RBP11.12□□□□□ -0.63
PRPF3-202ENST00000467329 USP17L3A6NCW0 530 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 USP17L4A6NCW7 530 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 C21orf2O43822 256 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 PDIA3P30101 505 aaKnown RBP11.11□□□□□ -0.63
PRPF3-202ENST00000467329 MCM4P33991 863 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 HMGN5P82970 282 aaKnown RBP11.11□□□□□ -0.63
PRPF3-202ENST00000467329 APOBRQ0VD83 1088 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 SART3Q15020 963 aaKnown RBP11.11□□□□□ -0.63
PRPF3-202ENST00000467329 R3HDM1Q15032 1099 aaKnown RBP11.11□□□□□ -0.63
PRPF3-202ENST00000467329 DACT2Q5SW24 774 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 USP17L1Q7RTZ2 530 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 TMTC2Q8N394 836 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 NECAB1Q8N987 351 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 RGS22Q8NE09 1264 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 LRRC2Q9BYS8 371 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 DAGLAQ9Y4D2 1042 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 TACC3Q9Y6A5 838 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
PRPF3-202ENST00000467329 USP17L12C9JPN9 530 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 USP17L21D6R901 530 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 DHX16O60231 1041 aaKnown RBP11.11□□□□□ -0.63
PRPF3-202ENST00000467329 GJB2P29033 226 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 USP5P45974 858 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 RHBDL3P58872 404 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 TAOK2Q9UL54 1235 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 ZDHHC9Q9Y397 364 aa11.11□□□□□ -0.63
PRPF3-202ENST00000467329 MYO3BQ8WXR4 1341 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 MINDY4BA8MYZ0 360 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 C12orf60Q5U649 245 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 TEX11Q8IYF3 940 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 ATF5Q9Y2D1 282 aaPredicted RBP11.1□□□□□ -0.63
PRPF3-202ENST00000467329 SCN9AQ15858 1988 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 PPIP5K2O43314 1243 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 KDM4AO75164 1064 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 SCRN1Q12765 414 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 AOC3Q16853 763 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 DALRD3Q5D0E6 543 aaKnown RBP11.1□□□□□ -0.63
PRPF3-202ENST00000467329 TMEM67Q5HYA8 995 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 TEKT1Q969V4 418 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 DBNDD1Q9H9R9 158 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 LY9Q9HBG7 655 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 ZSWIM5Q9P217 1185 aa11.1□□□□□ -0.63
PRPF3-202ENST00000467329 TTF2Q9UNY4 1162 aaKnown RBP11.1□□□□□ -0.63
PRPF3-202ENST00000467329 FER1L6Q2WGJ9 1857 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 KLF18A0A0U1RQI7 1052 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 PDE4BQ07343 736 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 CHST3Q7LGC8 479 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 BRPF3Q9ULD4 1205 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 ECM29Q5VYK3 1845 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 GOLGA8BA8MQT2 603 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
PRPF3-202ENST00000467329 STX6O43752 255 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
PRPF3-202ENST00000467329 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-202ENST00000467329 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 NSUN7Q8NE18 718 aaKnown RBP11.09□□□□□ -0.63
PRPF3-202ENST00000467329 FBXW7Q969H0 707 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 ZNF287Q9HBT7 754 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 MCM9Q9NXL9 1143 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-202ENST00000467329 HPS5Q9UPZ3 1129 aa11.09□□□□□ -0.63
PRPF3-202ENST00000467329 LTBP3Q9NS15 1303 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 ERICH2A1L162 156 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 BAG4O95429 457 aaKnown RBP11.08□□□□□ -0.64
PRPF3-202ENST00000467329 SYT1P21579 422 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 PTGER2P43116 358 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 STK3Q13188 491 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 SERPINA10Q9UK55 444 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 FLT1P17948 1338 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 GOLGA6L22H0YM25 854 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 PKP1Q13835 747 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 APOA5Q6Q788 366 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 TGFBRAP1Q8WUH2 860 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 UBAC1Q9BSL1 405 aa11.08□□□□□ -0.64
PRPF3-202ENST00000467329 GPHNQ9NQX3 736 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-202ENST00000467329 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
PRPF3-202ENST00000467329 CDKL5O76039 1030 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 CRKP46108 304 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 MMP14P50281 582 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 NBR1Q14596 966 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 WTAPQ15007 396 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 SEC23AQ15436 765 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 MTMR6Q9Y217 621 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 ATP6V1DQ9Y5K8 247 aa11.07□□□□□ -0.64
PRPF3-202ENST00000467329 MYH1P12882 1939 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms