RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GNB5O14775 395 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 DDX3YO15523 660 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 ADAM11O75078 769 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 LIG1P18858 919 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 GIPRP48546 466 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 EIF6P56537 245 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 DUOXA2Q1HG44 320 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 FOXD4L6Q3SYB3 417 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 ZC3H12AQ5D1E8 599 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 FOXD4L3Q6VB84 417 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 TRIM11Q96F44 468 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 PLVAPQ9BX97 442 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 LNPKQ9C0E8 428 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 ZNF408Q9H9D4 720 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 KCNK4Q9NYG8 393 aa6.68□□□□□ -1.34
CDC42BPA-211ENST00000466538 WIPF1O43516 503 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 AOC2O75106 756 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 CTSBP07858 339 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 ETFBP38117 255 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 CLCQ05315 142 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 PDE4BQ07343 736 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 MLECQ14165 292 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 INPP5AQ14642 412 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 TNNI3KQ59H18 835 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 CYFIP1Q7L576 1253 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 BEND7Q8N7W2 519 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 PLPPR2Q96GM1 343 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 SHDQ96IW2 340 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 TMPRSS13Q9BYE2 586 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 NOP53Q9NZM5 478 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 PRKAG3Q9UGI9 489 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 ZNRF3Q9ULT6 936 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 PPT2Q9UMR5 302 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 POLR3KQ9Y2Y1 108 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 PCDHB14Q9Y5E9 798 aa6.67□□□□□ -1.34
CDC42BPA-211ENST00000466538 DLGAP3O95886 979 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 ELNP15502 786 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 ERVK-24P63145 666 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 SNRPNP63162 240 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 RING1Q06587 406 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 WIPI1Q5MNZ9 446 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 LRFN4Q6PJG9 635 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 GK5Q6ZS86 529 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 NOP9Q86U38 636 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 TMEM130Q8N3G9 435 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 ELMO3Q96BJ8 720 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 WDR89Q96FK6 387 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 WDR18Q9BV38 432 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 CYP4F12Q9HCS2 524 aa6.66□□□□□ -1.34
CDC42BPA-211ENST00000466538 FANCGO15287 622 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 SELPP16109 830 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 PRRT3Q5FWE3 981 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 NUTM2GQ5VZR2 741 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 FBXW10Q5XX13 1052 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 SMG8Q8ND04 991 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 MKL1Q969V6 931 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 ANAPC16Q96DE5 110 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 RUSC1Q9BVN2 902 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 RNF208Q9H0X6 261 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 R3HCC1Q9Y3T6 440 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 PCDHGC5Q9Y5F6 944 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 MRVI1Q9Y6F6 885 aa6.65□□□□□ -1.34
CDC42BPA-211ENST00000466538 KLF4O43474 513 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 CASP7P55210 303 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 ID3Q02535 119 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 RAB33AQ14088 237 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 CCDC144BQ3MJ40 725 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 TMEM201Q5SNT2 666 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 ANKS3Q6ZW76 656 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 PODNQ7Z5L7 613 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 PMFBP1Q8TBY8 1022 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 UBASH3BQ8TF42 649 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 WNT10AQ9GZT5 417 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 OSBPL2Q9H1P3 480 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 CRIM1Q9NZV1 1036 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 SIRPGQ9P1W8 387 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 ADAM30Q9UKF2 790 aa6.64□□□□□ -1.35
CDC42BPA-211ENST00000466538 MEIS3P2A8K0S8 358 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 U2SURPO15042 1029 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 GRIN3BO60391 1043 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 HTR3BO95264 441 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 CDK8P49336 464 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 NFE2L2Q16236 605 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 INTS3Q68E01 1043 aaKnown RBP6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 CCDC81Q6ZN84 652 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 LRP10Q7Z4F1 713 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 C12orf40Q86WS4 652 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 TM9SF2Q99805 663 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 ATXN3LQ9H3M9 355 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 HIF3AQ9Y2N7 669 aa6.63□□□□□ -1.35
CDC42BPA-211ENST00000466538 PLCG1P19174 1290 aa6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 SOX4Q06945 474 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 ACAD11Q709F0 780 aa6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 C19orf47Q8N9M1 422 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-211ENST00000466538 KCT2Q8NC54 265 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms